RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 STRNO43815 780 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 INHAP05111 366 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 FDX1P10109 184 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 CYP2B6P20813 491 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 COPB2P35606 906 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 STAT3P40763 770 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 TRDNQ13061 729 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 KCTD1Q719H9 257 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 NCAPG2Q86XI2 1143 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 TMEM106CQ9BVX2 250 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 TEX13BQ9BXU2 312 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 SLC38A10Q9HBR0 1119 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 TAF6LQ9Y6J9 622 aa26.88■■□□□ 1.89
TDP1-216ENST00000556867 ZBED4O75132 1171 aa26.87■■□□□ 1.89
TDP1-216ENST00000556867 HMGCRP04035 888 aa26.87■■□□□ 1.89
TDP1-216ENST00000556867 MTFR1Q15390 333 aa26.87■■□□□ 1.89
TDP1-216ENST00000556867 TRMT44Q8IYL2 757 aaKnown RBP26.87■■□□□ 1.89
TDP1-216ENST00000556867 ENAHQ8N8S7 591 aaPredicted RBP26.87■■□□□ 1.89
TDP1-216ENST00000556867 CHMP4CQ96CF2 233 aa26.87■■□□□ 1.89
TDP1-216ENST00000556867 ANO2Q9NQ90 1003 aa26.87■■□□□ 1.89
TDP1-216ENST00000556867 MTMR7Q9Y216 660 aa26.87■■□□□ 1.89
TDP1-216ENST00000556867 TNKSO95271 1327 aa26.87■■□□□ 1.89
TDP1-216ENST00000556867 BRCA2P51587 3418 aa26.87■■□□□ 1.89
TDP1-216ENST00000556867 POTEFA5A3E0 1075 aa26.86■■□□□ 1.89
TDP1-216ENST00000556867 E7EWF7 191 aa26.86■■□□□ 1.89
TDP1-216ENST00000556867 MYCP01106 439 aaPredicted RBP26.86■■□□□ 1.89
TDP1-216ENST00000556867 HOXC6P09630 235 aa26.86■■□□□ 1.89
TDP1-216ENST00000556867 PDHBP11177 359 aa26.86■■□□□ 1.89
TDP1-216ENST00000556867 IKQ13123 557 aaPredicted RBP26.86■■□□□ 1.89
TDP1-216ENST00000556867 CCDC96Q2M329 555 aa26.86■■□□□ 1.89
TDP1-216ENST00000556867 ABRAQ8N0Z2 381 aa26.86■■□□□ 1.89
TDP1-216ENST00000556867 TRIB2Q92519 343 aa26.86■■□□□ 1.89
TDP1-216ENST00000556867 UBAC1Q9BSL1 405 aa26.86■■□□□ 1.89
TDP1-216ENST00000556867 SNHG28P0DPA3 235 aa26.85■■□□□ 1.89
TDP1-216ENST00000556867 OAZ1P54368 228 aa26.85■■□□□ 1.89
TDP1-216ENST00000556867 STOX1Q6ZVD7 989 aa26.85■■□□□ 1.89
TDP1-216ENST00000556867 CYB5R4Q7L1T6 521 aa26.85■■□□□ 1.89
TDP1-216ENST00000556867 CTDP1Q9Y5B0 961 aaPredicted RBP26.85■■□□□ 1.89
TDP1-216ENST00000556867 ZNFX1Q9P2E3 1918 aaKnown RBP26.84■■□□□ 1.89
TDP1-216ENST00000556867 CCL5P13501 91 aa26.84■■□□□ 1.89
TDP1-216ENST00000556867 ZKSCAN1P17029 563 aaPredicted RBP26.84■■□□□ 1.89
TDP1-216ENST00000556867 ADORA2AP29274 412 aa26.84■■□□□ 1.89
TDP1-216ENST00000556867 SNRNP48Q6IEG0 339 aaKnown RBP26.84■■□□□ 1.89
TDP1-216ENST00000556867 BTNL9Q6UXG8 535 aa26.84■■□□□ 1.89
TDP1-216ENST00000556867 RALYLQ86SE5 291 aaKnown RBP26.84■■□□□ 1.89
TDP1-216ENST00000556867 PNMA1Q8ND90 353 aa26.84■■□□□ 1.89
TDP1-216ENST00000556867 NCOA7Q8NI08 942 aa26.84■■□□□ 1.89
TDP1-216ENST00000556867 KAT14Q9H8E8 782 aa26.84■■□□□ 1.89
TDP1-216ENST00000556867 CPXCR1Q8N123 301 aa26.83■■□□□ 1.89
TDP1-216ENST00000556867 PRR12Q9ULL5 1215 aa26.83■■□□□ 1.89
TDP1-216ENST00000556867 SLC27A2O14975 620 aa26.82■■□□□ 1.88
TDP1-216ENST00000556867 FCER1AP12319 257 aa26.82■■□□□ 1.88
TDP1-216ENST00000556867 ZNF543Q08ER8 600 aa26.82■■□□□ 1.88
TDP1-216ENST00000556867 NECTIN1Q15223 517 aa26.82■■□□□ 1.88
TDP1-216ENST00000556867 SEC23AQ15436 765 aa26.82■■□□□ 1.88
TDP1-216ENST00000556867 CCL14Q16627 93 aa26.82■■□□□ 1.88
TDP1-216ENST00000556867 UNC93B1Q9H1C4 597 aa26.82■■□□□ 1.88
TDP1-216ENST00000556867 RAVER2Q9HCJ3 691 aaKnown RBP26.82■■□□□ 1.88
TDP1-216ENST00000556867 FRMPD2Q68DX3 1309 aaPredicted RBP26.82■■□□□ 1.88
TDP1-216ENST00000556867 CREB3L3Q68CJ9 461 aa26.81■■□□□ 1.88
TDP1-216ENST00000556867 TTBK2Q6IQ55 1244 aa26.81■■□□□ 1.88
TDP1-216ENST00000556867 RNF208Q9H0X6 261 aa26.81■■□□□ 1.88
TDP1-216ENST00000556867 RIPK3Q9Y572 518 aa26.81■■□□□ 1.88
TDP1-216ENST00000556867 GJB1P08034 283 aa26.8■■□□□ 1.88
TDP1-216ENST00000556867 TRIM32Q13049 653 aa26.8■■□□□ 1.88
TDP1-216ENST00000556867 GPATCH4Q5T3I0 446 aaKnown RBP26.8■■□□□ 1.88
TDP1-216ENST00000556867 IFIT1BQ5T764 474 aaKnown RBP26.8■■□□□ 1.88
TDP1-216ENST00000556867 MAP3K21Q5TCX8 1036 aa26.8■■□□□ 1.88
TDP1-216ENST00000556867 SYDE2Q5VT97 1194 aa26.8■■□□□ 1.88
TDP1-216ENST00000556867 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.8■■□□□ 1.88
TDP1-216ENST00000556867 DPP9Q86TI2 863 aa26.8■■□□□ 1.88
TDP1-216ENST00000556867 MB21D2Q8IYB1 491 aaPredicted RBP26.8■■□□□ 1.88
TDP1-216ENST00000556867 NPLOC4Q8TAT6 608 aa26.8■■□□□ 1.88
TDP1-216ENST00000556867 MMP19Q99542 508 aa26.8■■□□□ 1.88
TDP1-216ENST00000556867 GPCPD1Q9NPB8 672 aa26.8■■□□□ 1.88
TDP1-216ENST00000556867 COBLO75128 1261 aa26.79■■□□□ 1.88
TDP1-216ENST00000556867 SLC16A2P36021 539 aa26.79■■□□□ 1.88
TDP1-216ENST00000556867 KCTD2Q14681 263 aa26.79■■□□□ 1.88
TDP1-216ENST00000556867 PAK6Q9NQU5 681 aaPredicted RBP26.79■■□□□ 1.88
TDP1-216ENST00000556867 SLC5A4Q9NY91 659 aa26.79■■□□□ 1.88
TDP1-216ENST00000556867 FLRT1Q9NZU1 646 aa26.79■■□□□ 1.88
TDP1-216ENST00000556867 ZNF536O15090 1300 aa26.79■■□□□ 1.88
TDP1-216ENST00000556867 PLXNA1Q9UIW2 1896 aa26.79■■□□□ 1.88
TDP1-216ENST00000556867 EN2P19622 333 aaPredicted RBP26.78■■□□□ 1.88
TDP1-216ENST00000556867 RANBP17Q9H2T7 1088 aaKnown RBP26.78■■□□□ 1.88
TDP1-216ENST00000556867 FBXO40Q9UH90 709 aa26.78■■□□□ 1.88
TDP1-216ENST00000556867 RPTORQ8N122 1335 aa26.77■■□□□ 1.88
TDP1-216ENST00000556867 IFIT3O14879 490 aaKnown RBP26.77■■□□□ 1.88
TDP1-216ENST00000556867 IGHA2P01877 340 aa26.77■■□□□ 1.88
TDP1-216ENST00000556867 PRKAR2AP13861 404 aaKnown RBP26.77■■□□□ 1.88
TDP1-216ENST00000556867 GJA8P48165 433 aa26.77■■□□□ 1.88
TDP1-216ENST00000556867 ANTXR2P58335 489 aa26.77■■□□□ 1.88
TDP1-216ENST00000556867 MLLT1Q03111 559 aaPredicted RBP26.77■■□□□ 1.88
TDP1-216ENST00000556867 SART3Q15020 963 aaKnown RBP26.77■■□□□ 1.88
TDP1-216ENST00000556867 RNF20Q5VTR2 975 aa26.77■■□□□ 1.88
TDP1-216ENST00000556867 OLFML2BQ68BL8 750 aa26.77■■□□□ 1.88
TDP1-216ENST00000556867 CHST13Q8NET6 341 aa26.77■■□□□ 1.88
TDP1-216ENST00000556867 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.77■■□□□ 1.88
TDP1-216ENST00000556867 ERICH2A1L162 156 aa26.76■■□□□ 1.87
TDP1-216ENST00000556867 TKFCQ3LXA3 575 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms