RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 FRMPD3Q5JV73 1810 aa26.86■■□□□ 1.89
ACTN1-220ENST00000556433 SLFN13Q68D06 897 aa26.86■■□□□ 1.89
ACTN1-220ENST00000556433 GMCL1P1Q8NEA9 526 aa26.86■■□□□ 1.89
ACTN1-220ENST00000556433 LRCH3Q96II8 777 aa26.86■■□□□ 1.89
ACTN1-220ENST00000556433 PDE1AP54750 535 aa26.85■■□□□ 1.89
ACTN1-220ENST00000556433 DDX11Q96FC9 970 aa26.85■■□□□ 1.89
ACTN1-220ENST00000556433 YTHDC1Q96MU7 727 aaKnown RBP26.85■■□□□ 1.89
ACTN1-220ENST00000556433 RAVER2Q9HCJ3 691 aaKnown RBP26.85■■□□□ 1.89
ACTN1-220ENST00000556433 ATP2A1O14983 1001 aa26.84■■□□□ 1.89
ACTN1-220ENST00000556433 FOXP2O15409 715 aa26.84■■□□□ 1.89
ACTN1-220ENST00000556433 BMP3P12645 472 aa26.84■■□□□ 1.89
ACTN1-220ENST00000556433 RTP1P59025 263 aa26.84■■□□□ 1.89
ACTN1-220ENST00000556433 MDM2Q00987 491 aaPredicted RBP26.84■■□□□ 1.89
ACTN1-220ENST00000556433 LRRC41Q15345 812 aa26.84■■□□□ 1.89
ACTN1-220ENST00000556433 SLC38A10Q9HBR0 1119 aa26.84■■□□□ 1.89
ACTN1-220ENST00000556433 PLIN4Q96Q06 1357 aa26.84■■□□□ 1.89
ACTN1-220ENST00000556433 RARBP10826 455 aa26.83■■□□□ 1.89
ACTN1-220ENST00000556433 TAL1P17542 331 aaPredicted RBP26.83■■□□□ 1.89
ACTN1-220ENST00000556433 ADCYAP1R1P41586 468 aa26.83■■□□□ 1.89
ACTN1-220ENST00000556433 CTDSPL2Q05D32 466 aa26.83■■□□□ 1.89
ACTN1-220ENST00000556433 SLC39A5Q6ZMH5 540 aa26.83■■□□□ 1.89
ACTN1-220ENST00000556433 TDHQ8IZJ6 230 aa26.83■■□□□ 1.89
ACTN1-220ENST00000556433 INCENPQ9NQS7 918 aa26.83■■□□□ 1.89
ACTN1-220ENST00000556433 ISY1Q9ULR0 285 aaKnown RBP26.83■■□□□ 1.89
ACTN1-220ENST00000556433 ATP11BQ9Y2G3 1177 aa26.83■■□□□ 1.89
ACTN1-220ENST00000556433 VPS53Q5VIR6 699 aa26.82■■□□□ 1.88
ACTN1-220ENST00000556433 XPNPEP3Q9NQH7 507 aa26.82■■□□□ 1.88
ACTN1-220ENST00000556433 HELLSQ9NRZ9 838 aa26.82■■□□□ 1.88
ACTN1-220ENST00000556433 CNPY2Q9Y2B0 182 aa26.82■■□□□ 1.88
ACTN1-220ENST00000556433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.82■■□□□ 1.88
ACTN1-220ENST00000556433 SZT2Q5T011 3432 aa26.81■■□□□ 1.88
ACTN1-220ENST00000556433 TSPY2A6NKD2 308 aa26.81■■□□□ 1.88
ACTN1-220ENST00000556433 TMEM232C9JQI7 657 aa26.81■■□□□ 1.88
ACTN1-220ENST00000556433 ZNF865P0CJ78 1059 aaPredicted RBP26.81■■□□□ 1.88
ACTN1-220ENST00000556433 PPP4R3BQ5MIZ7 849 aa26.81■■□□□ 1.88
ACTN1-220ENST00000556433 FERMT2Q96AC1 680 aa26.81■■□□□ 1.88
ACTN1-220ENST00000556433 CHMP4CQ96CF2 233 aa26.81■■□□□ 1.88
ACTN1-220ENST00000556433 LBHD1Q9BQE6 289 aaPredicted RBP26.81■■□□□ 1.88
ACTN1-220ENST00000556433 PRKAG2Q9UGJ0 569 aa26.81■■□□□ 1.88
ACTN1-220ENST00000556433 MYH4Q9Y623 1939 aa26.8■■□□□ 1.88
ACTN1-220ENST00000556433 LRIT3Q3SXY7 679 aa26.8■■□□□ 1.88
ACTN1-220ENST00000556433 MSL3Q8N5Y2 521 aaKnown RBP26.8■■□□□ 1.88
ACTN1-220ENST00000556433 STX8Q9UNK0 236 aa26.8■■□□□ 1.88
ACTN1-220ENST00000556433 SMCHD1A6NHR9 2005 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 DNAJC25-GNG10A0A024R161 153 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 AKR1A1P14550 325 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 MCCP23508 829 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 SLC1A4P43007 532 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 OAZ1P54368 228 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 AAMPQ13685 434 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 RNF180Q86T96 592 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 ANKRD35Q8N283 1001 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 CHST13Q8NET6 341 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 CHURC1Q8WUH1 139 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 GMCL1Q96IK5 515 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 LNPKQ9C0E8 428 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 FBXO40Q9UH90 709 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 ANAPC4Q9UJX5 808 aa26.79■■□□□ 1.88
ACTN1-220ENST00000556433 RANBP6O60518 1105 aaKnown RBP26.78■■□□□ 1.88
ACTN1-220ENST00000556433 PGK1P00558 417 aa26.78■■□□□ 1.88
ACTN1-220ENST00000556433 FDX1P10109 184 aa26.78■■□□□ 1.88
ACTN1-220ENST00000556433 STAT2P52630 851 aa26.78■■□□□ 1.88
ACTN1-220ENST00000556433 IKQ13123 557 aaPredicted RBP26.78■■□□□ 1.88
ACTN1-220ENST00000556433 ALX1Q15699 326 aa26.78■■□□□ 1.88
ACTN1-220ENST00000556433 MCMDC2Q4G0Z9 681 aa26.78■■□□□ 1.88
ACTN1-220ENST00000556433 STAG1Q8WVM7 1258 aa26.78■■□□□ 1.88
ACTN1-220ENST00000556433 FAM227BQ96M60 508 aa26.78■■□□□ 1.88
ACTN1-220ENST00000556433 IL17RBQ9NRM6 502 aa26.78■■□□□ 1.88
ACTN1-220ENST00000556433 TACC3Q9Y6A5 838 aa26.78■■□□□ 1.88
ACTN1-220ENST00000556433 SYNGAP1Q96PV0 1343 aa26.77■■□□□ 1.88
ACTN1-220ENST00000556433 NMT2O60551 498 aa26.77■■□□□ 1.88
ACTN1-220ENST00000556433 SNAI1O95863 264 aaPredicted RBP26.77■■□□□ 1.88
ACTN1-220ENST00000556433 TRIM60Q495X7 471 aa26.77■■□□□ 1.88
ACTN1-220ENST00000556433 MAMDC4Q6UXC1 1216 aa26.77■■□□□ 1.88
ACTN1-220ENST00000556433 FAM160B2Q86V87 743 aa26.77■■□□□ 1.88
ACTN1-220ENST00000556433 RWDD1Q9H446 243 aaPredicted RBP26.77■■□□□ 1.88
ACTN1-220ENST00000556433 PHF24Q9UPV7 400 aa26.77■■□□□ 1.88
ACTN1-220ENST00000556433 SNX17Q15036 470 aa26.76■■□□□ 1.87
ACTN1-220ENST00000556433 B4GALNT3Q6L9W6 998 aa26.76■■□□□ 1.87
ACTN1-220ENST00000556433 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.76■■□□□ 1.87
ACTN1-220ENST00000556433 ZNF467Q7Z7K2 595 aaPredicted RBP26.76■■□□□ 1.87
ACTN1-220ENST00000556433 TICAM2Q86XR7 235 aa26.76■■□□□ 1.87
ACTN1-220ENST00000556433 HOMER2Q9NSB8 354 aa26.76■■□□□ 1.87
ACTN1-220ENST00000556433 FAM184BQ9ULE4 1060 aa26.76■■□□□ 1.87
ACTN1-220ENST00000556433 PLXNA1Q9UIW2 1896 aa26.75■■□□□ 1.87
ACTN1-220ENST00000556433 A0A0D9SFI3 127 aa26.75■■□□□ 1.87
ACTN1-220ENST00000556433 TRIM6-TRIM34B2RNG4 842 aa26.75■■□□□ 1.87
ACTN1-220ENST00000556433 FGAP02671 866 aa26.75■■□□□ 1.87
ACTN1-220ENST00000556433 RCSD1Q6JBY9 416 aa26.75■■□□□ 1.87
ACTN1-220ENST00000556433 GPR153Q6NV75 609 aa26.75■■□□□ 1.87
ACTN1-220ENST00000556433 LENG1Q96BZ8 264 aaPredicted RBP26.75■■□□□ 1.87
ACTN1-220ENST00000556433 PRDM5Q9NQX1 630 aaPredicted RBP26.75■■□□□ 1.87
ACTN1-220ENST00000556433 ZHX1Q9UKY1 873 aaPredicted RBP26.75■■□□□ 1.87
ACTN1-220ENST00000556433 ORC4O43929 436 aa26.74■■□□□ 1.87
ACTN1-220ENST00000556433 KCTD1Q719H9 257 aa26.74■■□□□ 1.87
ACTN1-220ENST00000556433 SMC5Q8IY18 1101 aa26.74■■□□□ 1.87
ACTN1-220ENST00000556433 RILPL2Q969X0 211 aa26.74■■□□□ 1.87
ACTN1-220ENST00000556433 TOMM22Q9NS69 142 aa26.74■■□□□ 1.87
ACTN1-220ENST00000556433 PLA2G6O60733 806 aa26.73■■□□□ 1.87
ACTN1-220ENST00000556433 FGRP09769 529 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms