RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 KIAA1328Q86T90 577 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 CTAGE6Q86UF2 777 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 DZIP1Q86YF9 867 aaKnown RBP11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 CTAGE4Q8IX94 777 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 SEC62Q99442 399 aaKnown RBP11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 ALDH8A1Q9H2A2 487 aaPredicted RBP11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 INTS13Q9NVM9 706 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 MAP3K5Q99683 1374 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 CHUKO15111 745 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 BBOX1O75936 387 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 ZNF202O95125 648 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 AARSP49588 968 aaKnown RBP eCLIP11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 PPP2R5BQ15173 497 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 WLSQ5T9L3 541 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 AGAP9Q5VTM2 703 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 CWF19L1Q69YN2 538 aaKnown RBP11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 LMBR1Q8WVP7 490 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 RBM41Q96IZ5 413 aaKnown RBP11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 EYA1Q99502 592 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 ECHDC1Q9NTX5 307 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 NLRP2Q9NX02 1062 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 CPDO75976 1380 aa11.53□□□□□ -0.56
EFCAB11-208ENST00000555872 A0A0D9SFI3 127 aa11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 SHOX2O60902 331 aaPredicted RBP11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 AKAP17AQ02040 695 aaKnown RBP11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 LRRC23Q53EV4 343 aaPredicted RBP11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 FAM76AQ8TAV0 307 aa11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 ZC3H15Q8WU90 426 aaKnown RBP11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 IGSF5Q9NSI5 407 aa11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 ZNF510Q9Y2H8 683 aa11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 CHD4Q14839 1912 aa11.52□□□□□ -0.56
EFCAB11-208ENST00000555872 SOWAHDA6NJG2 315 aa11.52□□□□□ -0.57
EFCAB11-208ENST00000555872 GGCXP38435 758 aa11.52□□□□□ -0.57
EFCAB11-208ENST00000555872 KRT72Q14CN4 511 aa11.52□□□□□ -0.57
EFCAB11-208ENST00000555872 STK38Q15208 465 aa11.52□□□□□ -0.57
EFCAB11-208ENST00000555872 CDCA7Q9BWT1 371 aaPredicted RBP11.52□□□□□ -0.57
EFCAB11-208ENST00000555872 ZCWPW1Q9H0M4 648 aa11.52□□□□□ -0.57
EFCAB11-208ENST00000555872 VIPAS39Q9H9C1 493 aa11.52□□□□□ -0.57
EFCAB11-208ENST00000555872 HPCAL4Q9UM19 191 aa11.52□□□□□ -0.57
EFCAB11-208ENST00000555872 A0A1W2PQ27 194 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 A0A1W2PQ64 194 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 A0A1W2PQD8 194 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 CTAGE9A4FU28 777 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 C1QTNF8P60827 252 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 ATL3Q6DD88 541 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 MFN1Q8IWA4 741 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 SLF2Q8IX21 1173 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 PLPP6Q8IY26 295 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 PCDHGC5Q9Y5F6 944 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 LRRC37A3O60309 1634 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 PTPDC1A2A3K4 754 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 RPSAP08865 295 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 VIL1P09327 827 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 FNTAP49354 379 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 TUBB4BP68371 445 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 TBX2Q13207 712 aaPredicted RBP11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 STIM1Q13586 685 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 BTG3Q14201 252 aaPredicted RBP11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 MYBPC3Q14896 1274 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 ZCCHC8Q6NZY4 707 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 SYCP3Q8IZU3 236 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 NSUN7Q8NE18 718 aaKnown RBP11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 SMARCC2Q8TAQ2 1214 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 MIPOL1Q8TD10 442 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 VMP1Q96GC9 406 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 OSBPL10Q9BXB5 764 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 WWC3Q9ULE0 1092 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 CLIC4Q9Y696 253 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 DISP2A7MBM2 1401 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 RNF8O76064 485 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 FOSL1P15407 271 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 SPECC1LQ69YQ0 1117 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 NEK10Q6ZWH5 1172 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 UBE2Q1Q7Z7E8 422 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 NEUROD6Q96NK8 337 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 NEK1Q96PY6 1258 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 EXOC1Q9NV70 894 aa11.51□□□□□ -0.57
EFCAB11-208ENST00000555872 USP42Q9H9J4 1324 aaKnown RBP11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 COL22A1Q8NFW1 1626 aaPredicted RBP11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 A0A1B0GVG6 124 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 NDUFB5O43674 189 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 KIAA0754O94854 1291 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 TUBBP07437 444 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 GNGT1P63211 74 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 DMPKQ09013 629 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 ZNF589Q86UQ0 364 aaPredicted RBP11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 PEX5LQ8IYB4 626 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 SLC35F6Q8N357 371 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 TMCO5AQ8N6Q1 288 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 LINC00301Q8NCQ3 95 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 CENPHQ9H3R5 247 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 AHCYL1O43865 530 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 PFKFB2O60825 505 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 CTDNEP1O95476 244 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 POLR3DP05423 398 aaPredicted RBP11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 FESP07332 822 aa11.5□□□□□ -0.57
EFCAB11-208ENST00000555872 PIP4K2BP78356 416 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms