RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 TICAM2Q86XR7 235 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 RAB11FIP4Q86YS3 637 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 WHAMMQ8TF30 809 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 DYNLL2Q96FJ2 89 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 ALDH8A1Q9H2A2 487 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-230ENST00000554673 SLKQ9H2G2 1235 aaPredicted RBP6.96□□□□□ -1.3
ATXN3-230ENST00000554673 AATFQ9NY61 560 aaKnown RBP eCLIP6.96□□□□□ -1.3
ATXN3-230ENST00000554673 MROH7-TTC4A0A0A0MT08 1334 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 ZNF541Q9H0D2 1346 aa6.96□□□□□ -1.3
ATXN3-230ENST00000554673 CNTNAP1P78357 1384 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 ROBO3Q96MS0 1386 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 CDC14CA4D256 554 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 TTLL8A6PVC2 850 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 ZBBXA8MT70 800 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 B4E1Z4 1266 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 HIP1O00291 1037 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 NMT2O60551 498 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 RECKO95980 971 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 ZFYP08048 801 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-230ENST00000554673 FDPSP14324 419 aaKnown RBP6.95□□□□□ -1.3
ATXN3-230ENST00000554673 VEGFAP15692 232 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-230ENST00000554673 CACNB3P54284 484 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 EVCP57679 992 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 SF3B2Q13435 895 aaKnown RBP6.95□□□□□ -1.3
ATXN3-230ENST00000554673 SEC23AQ15436 765 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 RNFT1Q5M7Z0 435 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 MFSD14BQ5SR56 506 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 DPP8Q6V1X1 898 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-230ENST00000554673 CLEC10AQ8IUN9 316 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 STK11IPQ8N1F8 1099 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 IGDCC4Q8TDY8 1250 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 TSEN34Q9BSV6 310 aaKnown RBP6.95□□□□□ -1.3
ATXN3-230ENST00000554673 COA1Q9GZY4 146 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 NCOA5Q9HCD5 579 aaKnown RBP6.95□□□□□ -1.3
ATXN3-230ENST00000554673 GJB4Q9NTQ9 266 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 RAI14Q9P0K7 980 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 ANAPC4Q9UJX5 808 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 SCAF8Q9UPN6 1271 aaKnown RBP6.95□□□□□ -1.3
ATXN3-230ENST00000554673 DNMT3AQ9Y6K1 912 aaPredicted RBP6.95□□□□□ -1.3
ATXN3-230ENST00000554673 SSC5DA1L4H1 1573 aa6.95□□□□□ -1.3
ATXN3-230ENST00000554673 MAGEB6P1A0A0J9YX57 407 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 F8W031 263 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-230ENST00000554673 PSMD14O00487 310 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 ALDH1B1P30837 517 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 BTDP43251 543 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 KCNJ4P48050 445 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 GABPAQ06546 454 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 APOBRQ0VD83 1088 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 SCRN1Q12765 414 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 TTF1Q15361 905 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-230ENST00000554673 SWI5Q1ZZU3 235 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 NAA16Q6N069 864 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-230ENST00000554673 CDC42EP5Q6NZY7 148 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 DLK2Q6UY11 383 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 VASH1Q7L8A9 365 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-230ENST00000554673 TMC4Q7Z404 712 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 ZNF804AQ7Z570 1209 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 BPHLQ86WA6 291 aaPredicted RBP6.94□□□□□ -1.3
ATXN3-230ENST00000554673 TTLL6Q8N841 843 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 FAM200AQ8TCP9 573 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 RUFY2Q8WXA3 655 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 CNKSR1Q969H4 720 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 NEK1Q96PY6 1258 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 PSMD1Q99460 953 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 IL17RBQ9NRM6 502 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 LRP2BPQ9P2M1 347 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 EGFL7Q9UHF1 273 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 SLC4A4Q9Y6R1 1079 aa6.94□□□□□ -1.3
ATXN3-230ENST00000554673 SH2B2O14492 632 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-230ENST00000554673 NPHP1O15259 732 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 RANBP6O60518 1105 aaKnown RBP6.93□□□□□ -1.3
ATXN3-230ENST00000554673 PRDM1O75626 825 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 RAD17O75943 681 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 RXRAP19793 462 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 CDC27P30260 824 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 TGFB2P61812 414 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 CXCL9Q07325 125 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 PPARAQ07869 468 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 MAP3K12Q12852 859 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 NTRK3Q16288 839 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 CAVIN4Q5BKX8 364 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 C12orf60Q5U649 245 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 Q6ZUG5 572 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 ANKMY2Q8IV38 441 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 DEPDC4Q8N2C3 294 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 FBXL16Q8N461 479 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 CCDC155Q8N6L0 562 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 WDR66Q8TBY9 1149 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 STAG1Q8WVM7 1258 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 PRMT6Q96LA8 375 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-230ENST00000554673 AIFM3Q96NN9 605 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 ZKSCAN3Q9BRR0 538 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 MYL10Q9BUA6 226 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 FHDC1Q9C0D6 1143 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-230ENST00000554673 LY9Q9HBG7 655 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 PDRG1Q9NUG6 133 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 ZSWIM5Q9P217 1185 aa6.93□□□□□ -1.3
ATXN3-230ENST00000554673 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.93□□□□□ -1.3
ATXN3-230ENST00000554673 SAP30BPQ9UHR5 308 aaKnown RBP6.93□□□□□ -1.3
ATXN3-230ENST00000554673 FLT1P17948 1338 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms