RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 REPS2Q8NFH8 660 aa18.06■□□□□ 0.48
SHMT2-204ENST00000553324 DCAF4Q8WV16 495 aa18.06■□□□□ 0.48
SHMT2-204ENST00000553324 TMEM47Q9BQJ4 181 aa18.06■□□□□ 0.48
SHMT2-204ENST00000553324 UNC93B1Q9H1C4 597 aa18.06■□□□□ 0.48
SHMT2-204ENST00000553324 SLC38A10Q9HBR0 1119 aa18.06■□□□□ 0.48
SHMT2-204ENST00000553324 ZNF214Q9UL59 606 aaPredicted RBP18.06■□□□□ 0.48
SHMT2-204ENST00000553324 ISY1Q9ULR0 285 aaKnown RBP18.06■□□□□ 0.48
SHMT2-204ENST00000553324 SGPL1O95470 568 aa18.05■□□□□ 0.48
SHMT2-204ENST00000553324 ADORA2AP29274 412 aa18.05■□□□□ 0.48
SHMT2-204ENST00000553324 MFSD14CQ5VZR4 134 aa18.05■□□□□ 0.48
SHMT2-204ENST00000553324 TRIB2Q92519 343 aa18.05■□□□□ 0.48
SHMT2-204ENST00000553324 IL25Q9H293 177 aa18.05■□□□□ 0.48
SHMT2-204ENST00000553324 PAK6Q9NQU5 681 aaPredicted RBP18.05■□□□□ 0.48
SHMT2-204ENST00000553324 KDM4AO75164 1064 aa18.04■□□□□ 0.48
SHMT2-204ENST00000553324 KCTD2Q14681 263 aa18.04■□□□□ 0.48
SHMT2-204ENST00000553324 CASC1Q6TDU7 716 aa18.04■□□□□ 0.48
SHMT2-204ENST00000553324 U2AF1L4Q8WU68 220 aaKnown RBP18.04■□□□□ 0.48
SHMT2-204ENST00000553324 MAP4K1Q92918 833 aa18.04■□□□□ 0.48
SHMT2-204ENST00000553324 ZSWIM5Q9P217 1185 aa18.04■□□□□ 0.48
SHMT2-204ENST00000553324 NEDD4P46934 1319 aa18.03■□□□□ 0.48
SHMT2-204ENST00000553324 TFRCP02786 760 aaKnown RBP18.03■□□□□ 0.48
SHMT2-204ENST00000553324 MAP3K21Q5TCX8 1036 aa18.03■□□□□ 0.48
SHMT2-204ENST00000553324 OLFML2BQ68BL8 750 aa18.03■□□□□ 0.48
SHMT2-204ENST00000553324 SNRNP48Q6IEG0 339 aaKnown RBP18.03■□□□□ 0.48
SHMT2-204ENST00000553324 ANKS1AQ92625 1134 aa18.03■□□□□ 0.48
SHMT2-204ENST00000553324 MMP19Q99542 508 aa18.03■□□□□ 0.48
SHMT2-204ENST00000553324 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.03■□□□□ 0.486e-7■□□□□ 8.9
SHMT2-204ENST00000553324 FBXO40Q9UH90 709 aa18.03■□□□□ 0.48
SHMT2-204ENST00000553324 DOCK3Q8IZD9 2030 aa18.03■□□□□ 0.48
SHMT2-204ENST00000553324 KIAA0100Q14667 2235 aaKnown RBP18.02■□□□□ 0.48
SHMT2-204ENST00000553324 B4E1Z4 1266 aa18.02■□□□□ 0.48
SHMT2-204ENST00000553324 PRKAR2AP13861 404 aaKnown RBP18.02■□□□□ 0.48
SHMT2-204ENST00000553324 PTH1RQ03431 593 aa18.02■□□□□ 0.48
SHMT2-204ENST00000553324 CCDC96Q2M329 555 aa18.02■□□□□ 0.48
SHMT2-204ENST00000553324 KCTD1Q719H9 257 aa18.02■□□□□ 0.48
SHMT2-204ENST00000553324 CPXCR1Q8N123 301 aa18.02■□□□□ 0.48
SHMT2-204ENST00000553324 CHST13Q8NET6 341 aa18.02■□□□□ 0.48
SHMT2-204ENST00000553324 DEFB118Q96PH6 123 aa18.02■□□□□ 0.48
SHMT2-204ENST00000553324 ZSCAN10Q96SZ4 725 aaPredicted RBP18.02■□□□□ 0.48
SHMT2-204ENST00000553324 UBAC1Q9BSL1 405 aa18.02■□□□□ 0.48
SHMT2-204ENST00000553324 DIS3Q9Y2L1 958 aaKnown RBP18.02■□□□□ 0.48
SHMT2-204ENST00000553324 CYP21A2P08686 494 aa18.01■□□□□ 0.47
SHMT2-204ENST00000553324 CACNB2Q08289 660 aaPredicted RBP18.01■□□□□ 0.47
SHMT2-204ENST00000553324 CCL14Q16627 93 aa18.01■□□□□ 0.47
SHMT2-204ENST00000553324 BTNL9Q6UXG8 535 aa18.01■□□□□ 0.47
SHMT2-204ENST00000553324 KAT14Q9H8E8 782 aa18.01■□□□□ 0.47
SHMT2-204ENST00000553324 RAVER2Q9HCJ3 691 aaKnown RBP18.01■□□□□ 0.47
SHMT2-204ENST00000553324 PNMA2Q9UL42 364 aa18.01■□□□□ 0.47
SHMT2-204ENST00000553324 MTMR7Q9Y216 660 aa18.01■□□□□ 0.47
SHMT2-204ENST00000553324 COBLO75128 1261 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 PDHBP11177 359 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 TRIM32Q13049 653 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 TKFCQ3LXA3 575 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 GPATCH4Q5T3I0 446 aaKnown RBP18■□□□□ 0.47
SHMT2-204ENST00000553324 NPLOC4Q8TAT6 608 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 DDX11Q96FC9 970 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 ZKSCAN3Q9BRR0 538 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 ESYT1Q9BSJ8 1104 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 CRISPLD2Q9H0B8 497 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 PRR12Q9ULL5 1215 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 MKI67P46013 3256 aaKnown RBP18■□□□□ 0.47
SHMT2-204ENST00000553324 RLFQ13129 1914 aa18■□□□□ 0.47
SHMT2-204ENST00000553324 MSCO60682 206 aa17.99■□□□□ 0.47
SHMT2-204ENST00000553324 SNHG28P0DPA3 235 aa17.99■□□□□ 0.47
SHMT2-204ENST00000553324 SLC4A3P48751 1232 aa17.99■□□□□ 0.47
SHMT2-204ENST00000553324 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.99■□□□□ 0.47
SHMT2-204ENST00000553324 RALYLQ86SE5 291 aaKnown RBP17.99■□□□□ 0.47
SHMT2-204ENST00000553324 ANKLE1Q8NAG6 615 aa17.99■□□□□ 0.47
SHMT2-204ENST00000553324 NCOA7Q8NI08 942 aa17.99■□□□□ 0.47
SHMT2-204ENST00000553324 CHMP4CQ96CF2 233 aa17.99■□□□□ 0.47
SHMT2-204ENST00000553324 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
SHMT2-204ENST00000553324 ERICH2A1L162 156 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 ZNF543Q08ER8 600 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 SART3Q15020 963 aaKnown RBP17.98■□□□□ 0.47
SHMT2-204ENST00000553324 IFIT1BQ5T764 474 aaKnown RBP17.98■□□□□ 0.47
SHMT2-204ENST00000553324 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 ANKRD35Q8N283 1001 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 MSL3Q8N5Y2 521 aaKnown RBP17.98■□□□□ 0.47
SHMT2-204ENST00000553324 ENAHQ8N8S7 591 aaPredicted RBP17.98■□□□□ 0.47
SHMT2-204ENST00000553324 PNMA1Q8ND90 353 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 SHISA4Q96DD7 197 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 MAML3Q96JK9 1138 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 PPP4R2Q9NY27 417 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 FLRT1Q9NZU1 646 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 RBM8AQ9Y5S9 174 aaKnown RBP17.98■□□□□ 0.47
SHMT2-204ENST00000553324 MYH4Q9Y623 1939 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 TNKSO95271 1327 aa17.98■□□□□ 0.47
SHMT2-204ENST00000553324 E7EWF7 191 aa17.97■□□□□ 0.47
SHMT2-204ENST00000553324 IGHA2P01877 340 aa17.97■□□□□ 0.47
SHMT2-204ENST00000553324 ZNF792Q3KQV3 632 aa17.97■□□□□ 0.47
SHMT2-204ENST00000553324 LSG1Q9H089 658 aaKnown RBP17.97■□□□□ 0.47
SHMT2-204ENST00000553324 GPCPD1Q9NPB8 672 aa17.97■□□□□ 0.47
SHMT2-204ENST00000553324 NRBP1Q9UHY1 535 aa17.97■□□□□ 0.47
SHMT2-204ENST00000553324 A0A0G2JMZ2 1700 aa17.97■□□□□ 0.47
SHMT2-204ENST00000553324 CDC45O75419 566 aa17.96■□□□□ 0.47
SHMT2-204ENST00000553324 CYP2C19P33261 490 aa17.96■□□□□ 0.47
SHMT2-204ENST00000553324 TTBK2Q6IQ55 1244 aa17.96■□□□□ 0.47
SHMT2-204ENST00000553324 TRERF1Q96PN7 1200 aa17.96■□□□□ 0.47
SHMT2-204ENST00000553324 RANBP17Q9H2T7 1088 aaKnown RBP17.96■□□□□ 0.47
SHMT2-204ENST00000553324 ACAD9Q9H845 621 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms