RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 GREB1LQ9C091 1923 aaPredicted RBP10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 A0A087X0B3 334 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 CLRN2A0PK11 232 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 NOVP48745 357 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 KCTD1Q719H9 257 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 SH3BP5LQ7L8J4 393 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 PLA2G4DQ86XP0 818 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 FOXP4Q8IVH2 680 aaPredicted RBP10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 MRIQ9BWK5 157 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 C6orf50Q9HD87 102 aa10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 ZBTB12Q9Y330 459 aaPredicted RBP10.35□□□□□ -0.75
RAB3IP-218ENST00000553099 TCP10L2B9ZVM9 353 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 PSMD14O00487 310 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 GNA11P29992 359 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 SLC16A2P36021 539 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 COA7Q96BR5 231 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 ZMYND12Q9H0C1 365 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 TMOD2Q9NZR1 351 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 ATF5Q9Y2D1 282 aaPredicted RBP10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 UTRNP46939 3433 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 M0R2N6 131 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 ACTN4O43707 911 aaKnown RBP10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 KCNA3P22001 575 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 PTGS1P23219 599 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 CDC25AP30304 524 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 TPM4P67936 248 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 ZNF543Q08ER8 600 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 TTBK2Q6IQ55 1244 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 GALNT17Q6IS24 598 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 DAGLBQ8NCG7 672 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 SMARCE1Q969G3 411 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 CCDC34Q96HJ3 373 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 CCDC17Q96LX7 622 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 CSRNP1Q96S65 589 aa10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 BIN2Q9UBW5 565 aaPredicted RBP10.34□□□□□ -0.75
RAB3IP-218ENST00000553099 EEF2P13639 858 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 LMOD1P29536 600 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 SEPT2Q15019 361 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 LETM2Q2VYF4 491 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 JAKMIP3Q5VZ66 844 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 CCDC186Q7Z3E2 898 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 OGFOD1Q8N543 542 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 RASSF8Q8NHQ8 419 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 FBXO41Q8TF61 875 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 SLC16A10Q8TF71 515 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 STAMQ92783 540 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 RIOX1Q9H6W3 641 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 NRBP1Q9UHY1 535 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 COL4A5P29400 1685 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 SNHG28P0DPA3 235 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 CASP1P29466 404 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 MDM2Q00987 491 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 ICA1Q05084 483 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 NONOQ15233 471 aaKnown RBP eCLIP10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 KANK3Q6NY19 840 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 ADGRF4Q8IZF3 695 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 REXO1Q8N1G1 1221 aaKnown RBP10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 PSMD1Q99460 953 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 BPIFA3Q9BQP9 254 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 HDAC9Q9UKV0 1011 aa10.33□□□□□ -0.76
RAB3IP-218ENST00000553099 SMTNL1A8MU46 457 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 CCNT1O60563 726 aaKnown RBP10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 SMC2O95347 1197 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 SMARCA1P28370 1054 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 SLC1A4P43007 532 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 DLGAP5Q15398 846 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 IL17AQ16552 155 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 SARM1Q6SZW1 724 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 KRT25Q7Z3Z0 450 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 NIM1KQ8IY84 436 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 VEZTQ9HBM0 779 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 MAN1B1Q9UKM7 699 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 TXLNAP40222 546 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 ABCB5Q2M3G0 1257 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 GRIPAP1Q4V328 841 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 GPATCH4Q5T3I0 446 aaKnown RBP10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 C17orf53Q8N3J3 647 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 TMEM60Q9H2L4 133 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 KANSL2Q9H9L4 492 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 JMJD4Q9H9V9 463 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 TMEM260Q9NX78 707 aa10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 MORC2Q9Y6X9 1032 aaPredicted RBP10.32□□□□□ -0.76
RAB3IP-218ENST00000553099 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 USP17L10C9JJH3 530 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 ZNF500O60304 480 aaPredicted RBP10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 SLFN14P0C7P3 912 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 BMP6P22004 513 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 ADCY7P51828 1080 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 IKQ13123 557 aaPredicted RBP10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 HSP90AA4PQ58FG1 418 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 PPP4R3BQ5MIZ7 849 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 ARL6IP4Q66PJ3 421 aaKnown RBP10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 DTHD1Q6ZMT9 781 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 FILIP1Q7Z7B0 1213 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 TBCKQ8TEA7 893 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 KCNF1Q9H3M0 494 aa10.31□□□□□ -0.76
RAB3IP-218ENST00000553099 PIM2Q9P1W9 311 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms