RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 FERMT2Q96AC1 680 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 NRBP1Q9UHY1 535 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 TUBE1Q9UJT0 475 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 C10orf71Q711Q0 1435 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 TCP10L2B9ZVM9 353 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 BMP15O95972 392 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 TRAPPC10P48553 1259 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 IL17AQ16552 155 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 FBXO41Q8TF61 875 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 EHD4Q9H223 541 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 MYH8P13535 1937 aa13.42□□□□□ -0.26
RNF41-203ENST00000547967 CASP1P29466 404 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 SOGA3Q5TF21 947 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 PLA2G4DQ86XP0 818 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 STAMQ92783 540 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 ZMYND12Q9H0C1 365 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 BIN2Q9UBW5 565 aaPredicted RBP13.41□□□□□ -0.26
RNF41-203ENST00000547967 ACTN4O43707 911 aaKnown RBP13.41□□□□□ -0.26
RNF41-203ENST00000547967 EEF2P13639 858 aaKnown RBP13.41□□□□□ -0.26
RNF41-203ENST00000547967 ZNF543Q08ER8 600 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 SEPT2Q15019 361 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 ASPRV1Q53RT3 343 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 JAKMIP3Q5VZ66 844 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 CCDC17Q96LX7 622 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 CSRNP1Q96S65 589 aa13.41□□□□□ -0.26
RNF41-203ENST00000547967 HOOK1Q9UJC3 728 aaKnown RBP13.41□□□□□ -0.26
RNF41-203ENST00000547967 BMP6P22004 513 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 RSBN1LQ6PCB5 846 aaPredicted RBP13.4□□□□□ -0.26
RNF41-203ENST00000547967 ADGRF4Q8IZF3 695 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 SLC16A10Q8TF71 515 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 CCDC12Q8WUD4 166 aaPredicted RBP13.4□□□□□ -0.26
RNF41-203ENST00000547967 C6orf50Q9HD87 102 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 SNHG28P0DPA3 235 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 PTGS1P23219 599 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 LETM2Q2VYF4 491 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 CCDC186Q7Z3E2 898 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 OGFOD1Q8N543 542 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 PSMD1Q99460 953 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 TMEM60Q9H2L4 133 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 TMEM260Q9NX78 707 aa13.4□□□□□ -0.26
RNF41-203ENST00000547967 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 LMOD1P29536 600 aaPredicted RBP13.39□□□□□ -0.27
RNF41-203ENST00000547967 GNA11P29992 359 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 GALNT17Q6IS24 598 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 C17orf53Q8N3J3 647 aaPredicted RBP13.39□□□□□ -0.27
RNF41-203ENST00000547967 C4orf32Q8N8J7 132 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 DAGLBQ8NCG7 672 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 SMARCE1Q969G3 411 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 MYO3BQ8WXR4 1341 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 USP17L10C9JJH3 530 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 CCNT1O60563 726 aaKnown RBP13.39□□□□□ -0.27
RNF41-203ENST00000547967 SMARCA1P28370 1054 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 DLGAP5Q15398 846 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 VEZTQ9HBM0 779 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 PIM2Q9P1W9 311 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 MAN1B1Q9UKM7 699 aa13.39□□□□□ -0.27
RNF41-203ENST00000547967 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
RNF41-203ENST00000547967 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
RNF41-203ENST00000547967 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 SLC1A4P43007 532 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 JAG1P78504 1218 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 ABCB5Q2M3G0 1257 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 HSP90AA4PQ58FG1 418 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 REXO1Q8N1G1 1221 aaKnown RBP13.38□□□□□ -0.27
RNF41-203ENST00000547967 KCNF1Q9H3M0 494 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 KANSL2Q9H9L4 492 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 COL4A5P29400 1685 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 PP2D1A8MPX8 630 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 GH2P01242 217 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 SLFN14P0C7P3 912 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 ICA1Q05084 483 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 NCAPHQ15003 741 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 NONOQ15233 471 aaKnown RBP eCLIP13.38□□□□□ -0.27
RNF41-203ENST00000547967 TATDN1Q6P1N9 297 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 SIAH1Q8IUQ4 282 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 PAGE5Q96GU1 130 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 BPIFA3Q9BQP9 254 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 TMOD2Q9NZR1 351 aa13.38□□□□□ -0.27
RNF41-203ENST00000547967 PPP1R11O60927 126 aaPredicted RBP13.37□□□□□ -0.27
RNF41-203ENST00000547967 ATP1A3P13637 1013 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 RRP1BQ14684 758 aaKnown RBP13.37□□□□□ -0.27
RNF41-203ENST00000547967 KANK3Q6NY19 840 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 SARM1Q6SZW1 724 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 DTHD1Q6ZMT9 781 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 NIM1KQ8IY84 436 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 PLIN2Q99541 437 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 NUP88Q99567 741 aaPredicted RBP13.37□□□□□ -0.27
RNF41-203ENST00000547967 MORC2Q9Y6X9 1032 aaPredicted RBP13.37□□□□□ -0.27
RNF41-203ENST00000547967 PNMA6FA0A0J9YX94 578 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 ENTPD3O75355 529 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 SMC2O95347 1197 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 KARSQ15046 597 aaKnown RBP13.37□□□□□ -0.27
RNF41-203ENST00000547967 CCDC144BQ3MJ40 725 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 GRIPAP1Q4V328 841 aa13.37□□□□□ -0.27
RNF41-203ENST00000547967 GPATCH4Q5T3I0 446 aaKnown RBP13.37□□□□□ -0.27
RNF41-203ENST00000547967 ARL6IP4Q66PJ3 421 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms