RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SNRNP48Q6IEG0 339 aaKnown RBP15.87■□□□□ 0.13
CPSF6-204ENST00000547486 CPXCR1Q8N123 301 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 ARRDC4Q8NCT1 418 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 TINF2Q9BSI4 451 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 TEX13BQ9BXU2 312 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 LNPKQ9C0E8 428 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 SLC38A10Q9HBR0 1119 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 RAVER2Q9HCJ3 691 aaKnown RBP15.87■□□□□ 0.13
CPSF6-204ENST00000547486 IL17RBQ9NRM6 502 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 SYNPO2Q9UMS6 1093 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 DIS3Q9Y2L1 958 aaKnown RBP15.87■□□□□ 0.13
CPSF6-204ENST00000547486 PARP14Q460N5 1801 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 PLIN4Q96Q06 1357 aa15.87■□□□□ 0.13
CPSF6-204ENST00000547486 ATP2A1O14983 1001 aa15.86■□□□□ 0.13
CPSF6-204ENST00000547486 NMT2O60551 498 aa15.86■□□□□ 0.13
CPSF6-204ENST00000547486 ZBED4O75132 1171 aa15.86■□□□□ 0.13
CPSF6-204ENST00000547486 COPB2P35606 906 aa15.86■□□□□ 0.13
CPSF6-204ENST00000547486 B4GALNT3Q6L9W6 998 aa15.86■□□□□ 0.13
CPSF6-204ENST00000547486 SMC5Q8IY18 1101 aa15.86■□□□□ 0.13
CPSF6-204ENST00000547486 LRCH3Q96II8 777 aa15.86■□□□□ 0.13
CPSF6-204ENST00000547486 HELLSQ9NRZ9 838 aa15.86■□□□□ 0.13
CPSF6-204ENST00000547486 FEM1BQ9UK73 627 aa15.86■□□□□ 0.13
CPSF6-204ENST00000547486 DNAJC25-GNG10A0A024R161 153 aa15.85■□□□□ 0.13
CPSF6-204ENST00000547486 A0A0D9SFI3 127 aa15.85■□□□□ 0.13
CPSF6-204ENST00000547486 MYCNP04198 464 aaPredicted RBP15.85■□□□□ 0.13
CPSF6-204ENST00000547486 ZNF865P0CJ78 1059 aaPredicted RBP15.85■□□□□ 0.13
CPSF6-204ENST00000547486 BMP3P12645 472 aa15.85■□□□□ 0.13
CPSF6-204ENST00000547486 MCCP23508 829 aa15.85■□□□□ 0.13
CPSF6-204ENST00000547486 LRRC41Q15345 812 aa15.85■□□□□ 0.13
CPSF6-204ENST00000547486 ALX1Q15699 326 aa15.85■□□□□ 0.13
CPSF6-204ENST00000547486 EXOC6Q8TAG9 804 aa15.85■□□□□ 0.13
CPSF6-204ENST00000547486 ANAPC4Q9UJX5 808 aa15.85■□□□□ 0.13
CPSF6-204ENST00000547486 TMEM232C9JQI7 657 aa15.84■□□□□ 0.13
CPSF6-204ENST00000547486 FGAP02671 866 aa15.84■□□□□ 0.13
CPSF6-204ENST00000547486 ADCYAP1R1P41586 468 aa15.84■□□□□ 0.13
CPSF6-204ENST00000547486 MDM2Q00987 491 aaPredicted RBP15.84■□□□□ 0.13
CPSF6-204ENST00000547486 MCMDC2Q4G0Z9 681 aa15.84■□□□□ 0.13
CPSF6-204ENST00000547486 SLC39A5Q6ZMH5 540 aa15.84■□□□□ 0.13
CPSF6-204ENST00000547486 GMCL1Q96IK5 515 aa15.84■□□□□ 0.13
CPSF6-204ENST00000547486 NRBP1Q9UHY1 535 aa15.84■□□□□ 0.13
CPSF6-204ENST00000547486 COL11A1P12107 1806 aaPredicted RBP15.84■□□□□ 0.13
CPSF6-204ENST00000547486 TSPY2A6NKD2 308 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 SNAI1O95863 264 aaPredicted RBP15.83■□□□□ 0.12
CPSF6-204ENST00000547486 PGK1P00558 417 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 FGRP09769 529 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 NOVP48745 357 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 RTP1P59025 263 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 NMIQ13287 307 aaPredicted RBP15.83■□□□□ 0.12
CPSF6-204ENST00000547486 AAMPQ13685 434 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 RASGRP2Q7LDG7 609 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 ZNF589Q86UQ0 364 aaPredicted RBP15.83■□□□□ 0.12
CPSF6-204ENST00000547486 FERMT2Q96AC1 680 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 LENG1Q96BZ8 264 aaPredicted RBP15.83■□□□□ 0.12
CPSF6-204ENST00000547486 DDX11Q96FC9 970 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 UBE2OQ9C0C9 1292 aaKnown RBP15.83■□□□□ 0.12
CPSF6-204ENST00000547486 RWDD1Q9H446 243 aaPredicted RBP15.83■□□□□ 0.12
CPSF6-204ENST00000547486 STX8Q9UNK0 236 aa15.83■□□□□ 0.12
CPSF6-204ENST00000547486 CTDP1Q9Y5B0 961 aaPredicted RBP15.83■□□□□ 0.12
CPSF6-204ENST00000547486 TRIM6-TRIM34B2RNG4 842 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 KBTBD13C9JR72 458 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 ORC4O43929 436 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 RANBP6O60518 1105 aaKnown RBP15.82■□□□□ 0.12
CPSF6-204ENST00000547486 HSPD1P10809 573 aaKnown RBP15.82■□□□□ 0.12
CPSF6-204ENST00000547486 SLC1A4P43007 532 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 OAZ1P54368 228 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 SNAP25P60880 206 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 NUCB1Q02818 461 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 MAMDC4Q6UXC1 1216 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.82■□□□□ 0.12
CPSF6-204ENST00000547486 CHD1LQ86WJ1 897 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 PLEKHM2Q8IWE5 1019 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 STAG1Q8WVM7 1258 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 RILPL2Q969X0 211 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 FGD4Q96M96 766 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 AGBL1Q96MI9 1066 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 XPNPEP3Q9NQH7 507 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 ATP11BQ9Y2G3 1177 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 ZNF536O15090 1300 aa15.82■□□□□ 0.12
CPSF6-204ENST00000547486 RARBP10826 455 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 STAT2P52630 851 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 SNX17Q15036 470 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 TRIM60Q495X7 471 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 FRMPD3Q5JV73 1810 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 RCSD1Q6JBY9 416 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 KCTD1Q719H9 257 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 TDHQ8IZJ6 230 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 ANKRD35Q8N283 1001 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 MSL3Q8N5Y2 521 aaKnown RBP15.81■□□□□ 0.12
CPSF6-204ENST00000547486 CHST13Q8NET6 341 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 CHURC1Q8WUH1 139 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 HOMER2Q9NSB8 354 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 ISY1Q9ULR0 285 aaKnown RBP15.81■□□□□ 0.12
CPSF6-204ENST00000547486 CNPY2Q9Y2B0 182 aa15.81■□□□□ 0.12
CPSF6-204ENST00000547486 ZNFX1Q9P2E3 1918 aaKnown RBP15.8■□□□□ 0.12
CPSF6-204ENST00000547486 SYNGAP1Q96PV0 1343 aa15.8■□□□□ 0.12
CPSF6-204ENST00000547486 AKR1A1P14550 325 aa15.8■□□□□ 0.12
CPSF6-204ENST00000547486 SDSP20132 328 aa15.8■□□□□ 0.12
CPSF6-204ENST00000547486 LRIT3Q3SXY7 679 aa15.8■□□□□ 0.12
CPSF6-204ENST00000547486 ZNF467Q7Z7K2 595 aaPredicted RBP15.8■□□□□ 0.12
CPSF6-204ENST00000547486 FAM160B2Q86V87 743 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms