RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 BEND4Q6ZU67 534 aa9.78□□□□□ -0.84
HIF1A-205ENST00000547430 FAM214BQ7L5A3 538 aa9.78□□□□□ -0.84
HIF1A-205ENST00000547430 DTWD2Q8NBA8 298 aa9.78□□□□□ -0.84
HIF1A-205ENST00000547430 GIMAP7Q8NHV1 300 aa9.78□□□□□ -0.84
HIF1A-205ENST00000547430 Q96M66 194 aa9.78□□□□□ -0.84
HIF1A-205ENST00000547430 SSBP4Q9BWG4 385 aaPredicted RBP9.78□□□□□ -0.84
HIF1A-205ENST00000547430 KCNF1Q9H3M0 494 aa9.78□□□□□ -0.84
HIF1A-205ENST00000547430 DHX15O43143 795 aaKnown RBP9.77□□□□□ -0.85
HIF1A-205ENST00000547430 KCNQ2O43526 872 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 SIGLEC6O43699 453 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 DLX3O60479 287 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 KCNH1O95259 989 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 STAT3P40763 770 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 KIR3DL1P43629 444 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 GTF2IRD2BQ6EKJ0 949 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 C22orf34Q6ZV56 151 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 GTF2IRD2Q86UP8 949 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 GATA6Q92908 595 aa9.77□□□□□ -0.85
HIF1A-205ENST00000547430 PRDM5Q9NQX1 630 aaPredicted RBP9.77□□□□□ -0.85
HIF1A-205ENST00000547430 FAM87AP0C7U9 286 aa9.76□□□□□ -0.85
HIF1A-205ENST00000547430 MYCLP1P12525 358 aaPredicted RBP9.76□□□□□ -0.85
HIF1A-205ENST00000547430 GFRA1P56159 465 aa9.76□□□□□ -0.85
HIF1A-205ENST00000547430 PPP2R5DQ14738 602 aa9.76□□□□□ -0.85
HIF1A-205ENST00000547430 SFRP5Q5T4F7 317 aa9.76□□□□□ -0.85
HIF1A-205ENST00000547430 TMC3Q7Z5M5 1100 aa9.76□□□□□ -0.85
HIF1A-205ENST00000547430 CLEC10AQ8IUN9 316 aa9.76□□□□□ -0.85
HIF1A-205ENST00000547430 FAM83CQ9BQN1 747 aa9.76□□□□□ -0.85
HIF1A-205ENST00000547430 NKX2-4Q9H2Z4 354 aa9.76□□□□□ -0.85
HIF1A-205ENST00000547430 KCNH3Q9ULD8 1083 aa9.76□□□□□ -0.85
HIF1A-205ENST00000547430 SCG5P05408 212 aa9.75□□□□□ -0.85
HIF1A-205ENST00000547430 MAP4K2Q12851 820 aa9.75□□□□□ -0.85
HIF1A-205ENST00000547430 INTS7Q9NVH2 962 aaKnown RBP9.75□□□□□ -0.85
HIF1A-205ENST00000547430 SFMBT1Q9UHJ3 866 aa9.75□□□□□ -0.85
HIF1A-205ENST00000547430 SF3B6Q9Y3B4 125 aaKnown RBP9.75□□□□□ -0.85
HIF1A-205ENST00000547430 PDE8AO60658 829 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 PRAMEF1O95521 474 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 ZNF865P0CJ78 1059 aaPredicted RBP9.74□□□□□ -0.85
HIF1A-205ENST00000547430 HOXC12P31275 282 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 SF1Q15637 639 aaKnown RBP9.74□□□□□ -0.85
HIF1A-205ENST00000547430 RNF180Q86T96 592 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 GSTCDQ8NEC7 633 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 CHAC2Q8WUX2 184 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 KCTD13Q8WZ19 329 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 C1orf159Q96HA4 380 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 CCDC140Q96MF4 163 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 ZDHHC15Q96MV8 337 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 DSCC1Q9BVC3 393 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 CHST7Q9NS84 486 aa9.74□□□□□ -0.85
HIF1A-205ENST00000547430 GSG1L2A8MUP6 293 aa9.73□□□□□ -0.85
HIF1A-205ENST00000547430 IGF2BP3O00425 579 aaKnown RBP eCLIP9.73□□□□□ -0.85
HIF1A-205ENST00000547430 SDSP20132 328 aa9.73□□□□□ -0.85
HIF1A-205ENST00000547430 GABREP78334 506 aa9.73□□□□□ -0.85
HIF1A-205ENST00000547430 NMIQ13287 307 aaPredicted RBP9.73□□□□□ -0.85
HIF1A-205ENST00000547430 OGFOD3Q6PK18 319 aa9.73□□□□□ -0.85
HIF1A-205ENST00000547430 HEXIM2Q96MH2 286 aaKnown RBP9.73□□□□□ -0.85
HIF1A-205ENST00000547430 CAAP1Q9H8G2 361 aa9.73□□□□□ -0.85
HIF1A-205ENST00000547430 TRIM39Q9HCM9 518 aa9.73□□□□□ -0.85
HIF1A-205ENST00000547430 CYP26B1Q9NR63 512 aa9.73□□□□□ -0.85
HIF1A-205ENST00000547430 MAGEC2Q9UBF1 373 aaPredicted RBP9.73□□□□□ -0.85
HIF1A-205ENST00000547430 GTF2IRD1Q9UHL9 959 aa9.73□□□□□ -0.85
HIF1A-205ENST00000547430 H0Y8X5 98 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 CBX7O95931 251 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 POU3F3P20264 500 aaPredicted RBP9.72□□□□□ -0.85
HIF1A-205ENST00000547430 ADMP35318 185 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 CHRNA4P43681 627 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 INSM1Q01101 510 aaPredicted RBP9.72□□□□□ -0.85
HIF1A-205ENST00000547430 AMPD2Q01433 879 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 CYP4F3Q08477 520 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 NTRK3Q16288 839 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 ZAR1Q86SH2 424 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 TMEM145Q8NBT3 493 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 SLC7A14Q8TBB6 771 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 PIWIL2Q8TC59 973 aaKnown RBP9.72□□□□□ -0.85
HIF1A-205ENST00000547430 SLC52A2Q9HAB3 445 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 MAPRE3Q9UPY8 281 aa9.72□□□□□ -0.85
HIF1A-205ENST00000547430 GPR55Q9Y2T6 319 aaPredicted RBP9.72□□□□□ -0.85
HIF1A-205ENST00000547430 PRR33A8MZF0 331 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 EFCAB14O75071 495 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 VAMP4O75379 141 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 DNAJC8O75937 253 aaPredicted RBP9.71□□□□□ -0.86
HIF1A-205ENST00000547430 CPP00450 1065 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 SNRPB2P08579 225 aaKnown RBP9.71□□□□□ -0.86
HIF1A-205ENST00000547430 SOX5P35711 763 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 TNK2Q07912 1038 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 SLC35F1Q5T1Q4 408 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 LRRTM3Q86VH5 581 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 TBC1D32Q96NH3 1257 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 TARS2Q9BW92 718 aaKnown RBP9.71□□□□□ -0.86
HIF1A-205ENST00000547430 HDAC8Q9BY41 377 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 FAM126AQ9BYI3 521 aaPredicted RBP9.71□□□□□ -0.86
HIF1A-205ENST00000547430 DDX56Q9NY93 547 aaKnown RBP9.71□□□□□ -0.86
HIF1A-205ENST00000547430 MINPP1Q9UNW1 487 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 CAPN6Q9Y6Q1 641 aa9.71□□□□□ -0.86
HIF1A-205ENST00000547430 SHISA3A0PJX4 238 aa9.7□□□□□ -0.86
HIF1A-205ENST00000547430 GSNP06396 782 aa9.7□□□□□ -0.86
HIF1A-205ENST00000547430 ITIH2P19823 946 aa9.7□□□□□ -0.86
HIF1A-205ENST00000547430 CNGA1P29973 690 aa9.7□□□□□ -0.86
HIF1A-205ENST00000547430 CTSKP43235 329 aa9.7□□□□□ -0.86
HIF1A-205ENST00000547430 BRAPQ7Z569 592 aa9.7□□□□□ -0.86
HIF1A-205ENST00000547430 ENOX1Q8TC92 643 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms