RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 PRAMEF19Q5SWL8 479 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 SLFN13Q68D06 897 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 B4GALNT3Q6L9W6 998 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 ARRDC4Q8NCT1 418 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 FAM227BQ96M60 508 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 SENP6Q9GZR1 1112 aaPredicted RBP26.97■■□□□ 1.91
CHD4-214ENST00000545942 NRBP1Q9UHY1 535 aa26.97■■□□□ 1.91
CHD4-214ENST00000545942 A0A0D9SFI3 127 aa26.96■■□□□ 1.91
CHD4-214ENST00000545942 BMP3P12645 472 aa26.96■■□□□ 1.91
CHD4-214ENST00000545942 SYN1P17600 705 aa26.96■■□□□ 1.91
CHD4-214ENST00000545942 CPXCR1Q8N123 301 aa26.96■■□□□ 1.91
CHD4-214ENST00000545942 EXOC6Q8TAG9 804 aa26.96■■□□□ 1.91
CHD4-214ENST00000545942 SLC38A10Q9HBR0 1119 aa26.96■■□□□ 1.91
CHD4-214ENST00000545942 TRIM6-TRIM34B2RNG4 842 aa26.95■■□□□ 1.91
CHD4-214ENST00000545942 CHD1LQ86WJ1 897 aa26.95■■□□□ 1.91
CHD4-214ENST00000545942 GDF15Q99988 308 aa26.95■■□□□ 1.91
CHD4-214ENST00000545942 TINF2Q9BSI4 451 aa26.95■■□□□ 1.91
CHD4-214ENST00000545942 RIPK3Q9Y572 518 aa26.95■■□□□ 1.91
CHD4-214ENST00000545942 FRMPD3Q5JV73 1810 aa26.95■■□□□ 1.9
CHD4-214ENST00000545942 MYH4Q9Y623 1939 aa26.95■■□□□ 1.9
CHD4-214ENST00000545942 IGHDP01880 384 aa26.94■■□□□ 1.9
CHD4-214ENST00000545942 ANO1Q5XXA6 986 aa26.94■■□□□ 1.9
CHD4-214ENST00000545942 GMCL1Q96IK5 515 aa26.94■■□□□ 1.9
CHD4-214ENST00000545942 RAVER2Q9HCJ3 691 aaKnown RBP26.94■■□□□ 1.9
CHD4-214ENST00000545942 INCENPQ9NQS7 918 aa26.94■■□□□ 1.9
CHD4-214ENST00000545942 ISY1Q9ULR0 285 aaKnown RBP26.94■■□□□ 1.9
CHD4-214ENST00000545942 STX8Q9UNK0 236 aa26.94■■□□□ 1.9
CHD4-214ENST00000545942 RANBP6O60518 1105 aaKnown RBP26.93■■□□□ 1.9
CHD4-214ENST00000545942 OAZ1P54368 228 aa26.93■■□□□ 1.9
CHD4-214ENST00000545942 NUCB1Q02818 461 aa26.93■■□□□ 1.9
CHD4-214ENST00000545942 GJC2Q5T442 439 aaPredicted RBP26.93■■□□□ 1.9
CHD4-214ENST00000545942 RILPL2Q969X0 211 aa26.93■■□□□ 1.9
CHD4-214ENST00000545942 DDX11Q96FC9 970 aa26.93■■□□□ 1.9
CHD4-214ENST00000545942 TMEM232C9JQI7 657 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 KBTBD13C9JR72 458 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 ORC4O43929 436 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 FGAP02671 866 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 FDX1P10109 184 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 BMP8BP34820 402 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 SLC1A4P43007 532 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 SLC4A3P48751 1232 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 STAT2P52630 851 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 NMIQ13287 307 aaPredicted RBP26.92■■□□□ 1.9
CHD4-214ENST00000545942 IL17RBQ9NRM6 502 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 TACC3Q9Y6A5 838 aa26.92■■□□□ 1.9
CHD4-214ENST00000545942 FGRP09769 529 aa26.91■■□□□ 1.9
CHD4-214ENST00000545942 HSPD1P10809 573 aaKnown RBP26.91■■□□□ 1.9
CHD4-214ENST00000545942 ZNF589Q86UQ0 364 aaPredicted RBP26.91■■□□□ 1.9
CHD4-214ENST00000545942 FAM160B2Q86V87 743 aa26.91■■□□□ 1.9
CHD4-214ENST00000545942 PLEKHM2Q8IWE5 1019 aa26.91■■□□□ 1.9
CHD4-214ENST00000545942 MSL3Q8N5Y2 521 aaKnown RBP26.91■■□□□ 1.9
CHD4-214ENST00000545942 CHURC1Q8WUH1 139 aa26.91■■□□□ 1.9
CHD4-214ENST00000545942 OSBPL3Q9H4L5 887 aa26.91■■□□□ 1.9
CHD4-214ENST00000545942 FBXO40Q9UH90 709 aa26.91■■□□□ 1.9
CHD4-214ENST00000545942 ZMYM6O95789 1325 aa26.91■■□□□ 1.9
CHD4-214ENST00000545942 NMT2O60551 498 aa26.9■■□□□ 1.9
CHD4-214ENST00000545942 MCCP23508 829 aa26.9■■□□□ 1.9
CHD4-214ENST00000545942 MAGEA10P43363 369 aaPredicted RBP26.9■■□□□ 1.9
CHD4-214ENST00000545942 IKQ13123 557 aaPredicted RBP26.9■■□□□ 1.9
CHD4-214ENST00000545942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.9■■□□□ 1.9
CHD4-214ENST00000545942 TOMM22Q9NS69 142 aa26.9■■□□□ 1.9
CHD4-214ENST00000545942 CNPY2Q9Y2B0 182 aa26.9■■□□□ 1.9
CHD4-214ENST00000545942 CCDC171Q6TFL3 1326 aa26.9■■□□□ 1.9
CHD4-214ENST00000545942 DNAJC25-GNG10A0A024R161 153 aa26.9■■□□□ 1.9
CHD4-214ENST00000545942 MYCNP04198 464 aaPredicted RBP26.9■■□□□ 1.9
CHD4-214ENST00000545942 ATN1P54259 1190 aaPredicted RBP26.9■■□□□ 1.9
CHD4-214ENST00000545942 CHST13Q8NET6 341 aa26.9■■□□□ 1.9
CHD4-214ENST00000545942 STAG1Q8WVM7 1258 aa26.9■■□□□ 1.9
CHD4-214ENST00000545942 RARBP10826 455 aa26.89■■□□□ 1.89
CHD4-214ENST00000545942 MFAP1P55081 439 aaKnown RBP26.89■■□□□ 1.89
CHD4-214ENST00000545942 ANKRD35Q8N283 1001 aa26.89■■□□□ 1.89
CHD4-214ENST00000545942 ZNFX1Q9P2E3 1918 aaKnown RBP26.88■■□□□ 1.89
CHD4-214ENST00000545942 PLA2G6O60733 806 aa26.88■■□□□ 1.89
CHD4-214ENST00000545942 ZNF865P0CJ78 1059 aaPredicted RBP26.88■■□□□ 1.89
CHD4-214ENST00000545942 TAL1P17542 331 aaPredicted RBP26.88■■□□□ 1.89
CHD4-214ENST00000545942 SDSP20132 328 aa26.88■■□□□ 1.89
CHD4-214ENST00000545942 NOVP48745 357 aa26.88■■□□□ 1.89
CHD4-214ENST00000545942 LRRC41Q15345 812 aa26.88■■□□□ 1.89
CHD4-214ENST00000545942 RCSD1Q6JBY9 416 aa26.88■■□□□ 1.89
CHD4-214ENST00000545942 MAMDC4Q6UXC1 1216 aa26.88■■□□□ 1.89
CHD4-214ENST00000545942 ZNF467Q7Z7K2 595 aaPredicted RBP26.88■■□□□ 1.89
CHD4-214ENST00000545942 CHMP4CQ96CF2 233 aa26.88■■□□□ 1.89
CHD4-214ENST00000545942 XPNPEP3Q9NQH7 507 aa26.88■■□□□ 1.89
CHD4-214ENST00000545942 SYNGAP1Q96PV0 1343 aa26.87■■□□□ 1.89
CHD4-214ENST00000545942 AKR1A1P14550 325 aa26.87■■□□□ 1.89
CHD4-214ENST00000545942 RRP12Q5JTH9 1297 aaKnown RBP26.87■■□□□ 1.89
CHD4-214ENST00000545942 KCTD1Q719H9 257 aa26.87■■□□□ 1.89
CHD4-214ENST00000545942 RTP1P59025 263 aa26.86■■□□□ 1.89
CHD4-214ENST00000545942 HOMER2Q9NSB8 354 aa26.86■■□□□ 1.89
CHD4-214ENST00000545942 ADCYAP1R1P41586 468 aa26.85■■□□□ 1.89
CHD4-214ENST00000545942 HAND2P61296 217 aa26.85■■□□□ 1.89
CHD4-214ENST00000545942 SLC39A5Q6ZMH5 540 aa26.85■■□□□ 1.89
CHD4-214ENST00000545942 UBE2OQ9C0C9 1292 aaKnown RBP26.85■■□□□ 1.89
CHD4-214ENST00000545942 ACAD9Q9H845 621 aa26.85■■□□□ 1.89
CHD4-214ENST00000545942 SUPT16HQ9Y5B9 1047 aaKnown RBP26.85■■□□□ 1.89
CHD4-214ENST00000545942 PLXNA1Q9UIW2 1896 aa26.84■■□□□ 1.89
CHD4-214ENST00000545942 SNAI1O95863 264 aaPredicted RBP26.84■■□□□ 1.89
CHD4-214ENST00000545942 PCP11498 1178 aaKnown RBP26.84■■□□□ 1.89
CHD4-214ENST00000545942 RNF180Q86T96 592 aa26.84■■□□□ 1.89
CHD4-214ENST00000545942 DCAF4Q8WV16 495 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms