RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 LAMA4Q16363 1823 aa25.09■■□□□ 1.61
SCARB1-210ENST00000545493 SEPT4O43236 478 aa25.08■■□□□ 1.61
SCARB1-210ENST00000545493 KCTD2Q14681 263 aa25.08■■□□□ 1.61
SCARB1-210ENST00000545493 ZNF792Q3KQV3 632 aa25.08■■□□□ 1.61
SCARB1-210ENST00000545493 PRAMEF19Q5SWL8 479 aa25.08■■□□□ 1.61
SCARB1-210ENST00000545493 ANO1Q5XXA6 986 aa25.08■■□□□ 1.61
SCARB1-210ENST00000545493 SLFN13Q68D06 897 aa25.08■■□□□ 1.61
SCARB1-210ENST00000545493 CHD1LQ86WJ1 897 aa25.08■■□□□ 1.61
SCARB1-210ENST00000545493 PRPF38AQ8NAV1 312 aaKnown RBP25.08■■□□□ 1.61
SCARB1-210ENST00000545493 KIFC2Q96AC6 838 aa25.08■■□□□ 1.61
SCARB1-210ENST00000545493 SLC38A10Q9HBR0 1119 aa25.08■■□□□ 1.61
SCARB1-210ENST00000545493 DNM1LO00429 736 aa25.07■■□□□ 1.6
SCARB1-210ENST00000545493 ATP2A1O14983 1001 aa25.07■■□□□ 1.6
SCARB1-210ENST00000545493 SYN1P17600 705 aa25.07■■□□□ 1.6
SCARB1-210ENST00000545493 ALX1Q15699 326 aa25.07■■□□□ 1.6
SCARB1-210ENST00000545493 MCMDC2Q4G0Z9 681 aa25.07■■□□□ 1.6
SCARB1-210ENST00000545493 RASGRP2Q7LDG7 609 aa25.07■■□□□ 1.6
SCARB1-210ENST00000545493 IL17RBQ9NRM6 502 aa25.07■■□□□ 1.6
SCARB1-210ENST00000545493 FEM1BQ9UK73 627 aa25.07■■□□□ 1.6
SCARB1-210ENST00000545493 ZMYM6O95789 1325 aa25.07■■□□□ 1.6
SCARB1-210ENST00000545493 TSPY2A6NKD2 308 aa25.06■■□□□ 1.6
SCARB1-210ENST00000545493 NMT2O60551 498 aa25.06■■□□□ 1.6
SCARB1-210ENST00000545493 BMP3P12645 472 aa25.06■■□□□ 1.6
SCARB1-210ENST00000545493 NUCB1Q02818 461 aa25.06■■□□□ 1.6
SCARB1-210ENST00000545493 TICAM2Q86XR7 235 aa25.06■■□□□ 1.6
SCARB1-210ENST00000545493 PLEKHM2Q8IWE5 1019 aa25.06■■□□□ 1.6
SCARB1-210ENST00000545493 TRIM6-TRIM34B2RNG4 842 aa25.05■■□□□ 1.6
SCARB1-210ENST00000545493 HSPD1P10809 573 aaKnown RBP25.05■■□□□ 1.6
SCARB1-210ENST00000545493 GMCL1Q96IK5 515 aa25.05■■□□□ 1.6
SCARB1-210ENST00000545493 GDF15Q99988 308 aa25.05■■□□□ 1.6
SCARB1-210ENST00000545493 TINF2Q9BSI4 451 aa25.05■■□□□ 1.6
SCARB1-210ENST00000545493 OSBPL3Q9H4L5 887 aa25.05■■□□□ 1.6
SCARB1-210ENST00000545493 RAVER2Q9HCJ3 691 aaKnown RBP25.05■■□□□ 1.6
SCARB1-210ENST00000545493 DIS3Q9Y2L1 958 aaKnown RBP25.05■■□□□ 1.6
SCARB1-210ENST00000545493 CCDC171Q6TFL3 1326 aa25.05■■□□□ 1.6
SCARB1-210ENST00000545493 ORC4O43929 436 aa25.04■■□□□ 1.6
SCARB1-210ENST00000545493 ZBED4O75132 1171 aa25.04■■□□□ 1.6
SCARB1-210ENST00000545493 FGAP02671 866 aa25.04■■□□□ 1.6
SCARB1-210ENST00000545493 FGRP09769 529 aa25.04■■□□□ 1.6
SCARB1-210ENST00000545493 NOVP48745 357 aa25.04■■□□□ 1.6
SCARB1-210ENST00000545493 GJC2Q5T442 439 aaPredicted RBP25.04■■□□□ 1.6
SCARB1-210ENST00000545493 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.04■■□□□ 1.61e-7■□□□□ 8.9
SCARB1-210ENST00000545493 CPXCR1Q8N123 301 aa25.04■■□□□ 1.6
SCARB1-210ENST00000545493 NRBP1Q9UHY1 535 aa25.04■■□□□ 1.6
SCARB1-210ENST00000545493 STX8Q9UNK0 236 aa25.04■■□□□ 1.6
SCARB1-210ENST00000545493 LTBP2Q14767 1821 aa25.03■■□□□ 1.6
SCARB1-210ENST00000545493 A0A1W2PPC1 479 aa25.03■■□□□ 1.6
SCARB1-210ENST00000545493 TAL1P17542 331 aaPredicted RBP25.03■■□□□ 1.6
SCARB1-210ENST00000545493 RILPL2Q969X0 211 aa25.03■■□□□ 1.6
SCARB1-210ENST00000545493 CHMP4CQ96CF2 233 aa25.03■■□□□ 1.6
SCARB1-210ENST00000545493 SENP6Q9GZR1 1112 aaPredicted RBP25.03■■□□□ 1.6
SCARB1-210ENST00000545493 LRRC37A2A6NM11 1700 aa25.03■■□□□ 1.6
SCARB1-210ENST00000545493 DNAJC25-GNG10A0A024R161 153 aa25.02■■□□□ 1.6
SCARB1-210ENST00000545493 TMEM232C9JQI7 657 aa25.02■■□□□ 1.6
SCARB1-210ENST00000545493 RANBP6O60518 1105 aaKnown RBP25.02■■□□□ 1.6
SCARB1-210ENST00000545493 MAGEA10P43363 369 aaPredicted RBP25.02■■□□□ 1.6
SCARB1-210ENST00000545493 STAT2P52630 851 aa25.02■■□□□ 1.6
SCARB1-210ENST00000545493 OAZ1P54368 228 aa25.02■■□□□ 1.6
SCARB1-210ENST00000545493 ZNF865P0CJ78 1059 aaPredicted RBP25.01■■□□□ 1.59
SCARB1-210ENST00000545493 MCCP23508 829 aa25.01■■□□□ 1.59
SCARB1-210ENST00000545493 SLC1A4P43007 532 aa25.01■■□□□ 1.59
SCARB1-210ENST00000545493 PPP4R3BQ5MIZ7 849 aa25.01■■□□□ 1.59
SCARB1-210ENST00000545493 FGD4Q96M96 766 aa25.01■■□□□ 1.59
SCARB1-210ENST00000545493 ISY1Q9ULR0 285 aaKnown RBP25.01■■□□□ 1.59
SCARB1-210ENST00000545493 CTDP1Q9Y5B0 961 aaPredicted RBP25.01■■□□□ 1.59
SCARB1-210ENST00000545493 ZNF536O15090 1300 aa25.01■■□□□ 1.59
SCARB1-210ENST00000545493 MCM3APO60318 1980 aa25■■□□□ 1.59
SCARB1-210ENST00000545493 SMCHD1A6NHR9 2005 aa25■■□□□ 1.59
SCARB1-210ENST00000545493 SDSP20132 328 aa25■■□□□ 1.59
SCARB1-210ENST00000545493 SLC4A3P48751 1232 aa25■■□□□ 1.59
SCARB1-210ENST00000545493 ATN1P54259 1190 aaPredicted RBP25■■□□□ 1.59
SCARB1-210ENST00000545493 HAND2P61296 217 aa25■■□□□ 1.59
SCARB1-210ENST00000545493 KCTD1Q719H9 257 aa25■■□□□ 1.59
SCARB1-210ENST00000545493 LENG1Q96BZ8 264 aaPredicted RBP25■■□□□ 1.59
SCARB1-210ENST00000545493 KBTBD13C9JR72 458 aa24.99■■□□□ 1.59
SCARB1-210ENST00000545493 SOX1O00570 391 aaPredicted RBP24.99■■□□□ 1.59
SCARB1-210ENST00000545493 LCTP09848 1927 aa24.99■■□□□ 1.59
SCARB1-210ENST00000545493 BMP8BP34820 402 aa24.99■■□□□ 1.59
SCARB1-210ENST00000545493 LRRC41Q15345 812 aa24.99■■□□□ 1.59
SCARB1-210ENST00000545493 FAM160B2Q86V87 743 aa24.99■■□□□ 1.59
SCARB1-210ENST00000545493 TBC1D10CQ8IV04 446 aa24.99■■□□□ 1.59
SCARB1-210ENST00000545493 ARRDC4Q8NCT1 418 aa24.99■■□□□ 1.59
SCARB1-210ENST00000545493 STAG1Q8WVM7 1258 aa24.99■■□□□ 1.59
SCARB1-210ENST00000545493 SYNGAP1Q96PV0 1343 aa24.99■■□□□ 1.59
SCARB1-210ENST00000545493 RTP1P59025 263 aa24.98■■□□□ 1.59
SCARB1-210ENST00000545493 RRP12Q5JTH9 1297 aaKnown RBP24.98■■□□□ 1.59
SCARB1-210ENST00000545493 MSL3Q8N5Y2 521 aaKnown RBP24.98■■□□□ 1.59
SCARB1-210ENST00000545493 CHST13Q8NET6 341 aa24.98■■□□□ 1.59
SCARB1-210ENST00000545493 TOMM22Q9NS69 142 aa24.98■■□□□ 1.59
SCARB1-210ENST00000545493 HOMER2Q9NSB8 354 aa24.98■■□□□ 1.59
SCARB1-210ENST00000545493 SUPT16HQ9Y5B9 1047 aaKnown RBP24.98■■□□□ 1.59
SCARB1-210ENST00000545493 LAMA2P24043 3122 aaKnown RBP24.97■■□□□ 1.59
SCARB1-210ENST00000545493 NEDD4P46934 1319 aa24.97■■□□□ 1.59
SCARB1-210ENST00000545493 PLA2G6O60733 806 aa24.97■■□□□ 1.59
SCARB1-210ENST00000545493 FDX1P10109 184 aa24.97■■□□□ 1.59
SCARB1-210ENST00000545493 RARBP10826 455 aa24.97■■□□□ 1.59
SCARB1-210ENST00000545493 IKQ13123 557 aaPredicted RBP24.97■■□□□ 1.59
SCARB1-210ENST00000545493 MAMDC4Q6UXC1 1216 aa24.97■■□□□ 1.59
SCARB1-210ENST00000545493 DDX11Q96FC9 970 aa24.97■■□□□ 1.59
SCARB1-210ENST00000545493 XPNPEP3Q9NQH7 507 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms