RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 SLC44A5Q8NCS7 719 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 BICD2Q8TD16 824 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 AIFM3Q96NN9 605 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 USP28Q96RU2 1077 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 LZTS2Q9BRK4 669 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 MXD3Q9BW11 206 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 DHX36Q9H2U1 1008 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 FOXP1Q9H334 677 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 GRPEL1Q9HAV7 217 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 BRMS1Q9HCU9 246 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 DDX4Q9NQI0 724 aaKnown RBP6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 IL17RBQ9NRM6 502 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 PIM2Q9P1W9 311 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 SERPINB13Q9UIV8 391 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 RCOR1Q9UKL0 485 aa6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 MORC2Q9Y6X9 1032 aaPredicted RBP6.3□□□□□ -1.4
NPIPB3-214ENST00000545358 LTBP3Q9NS15 1303 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 IGKV6D-41A0A0C4DH26 115 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 A0A1W2PQ27 194 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 A0A1W2PQ64 194 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 A0A1W2PQD8 194 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 SYCE3A1L190 88 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 NMT2O60551 498 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 ENTPD3O75355 529 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 ZBTB7AO95365 584 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 VIL1P09327 827 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 TOP1P11387 765 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 SMARCA1P28370 1054 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 KRT2P35908 639 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 GCGRP47871 477 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 MMP14P50281 582 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 STK38Q15208 465 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 PKN1Q16512 942 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 DALRD3Q5D0E6 543 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 ANO1Q5XXA6 986 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 OTUD7BQ6GQQ9 843 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 BLOC1S3Q6QNY0 202 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 CCDC73Q6ZRK6 1079 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 GAS2L3Q86XJ1 694 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 NOSTRINQ8IVI9 506 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 NIM1KQ8IY84 436 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 DIS3L2Q8IYB7 885 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 LARGE2Q8N3Y3 721 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 LINC00301Q8NCQ3 95 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 PGBD1Q96JS3 809 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 CCDC17Q96LX7 622 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 TMEM47Q9BQJ4 181 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 TMUB1Q9BVT8 246 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 SPZ1Q9BXG8 430 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 NUP62CLQ9H1M0 184 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 TSPY26PQ9H489 355 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 CLSTN2Q9H4D0 955 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 TMOD2Q9NZR1 351 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 TFIP11Q9UBB9 837 aaKnown RBP6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 HDAC9Q9UKV0 1011 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 CD2APQ9Y5K6 639 aa6.29□□□□□ -1.4
NPIPB3-214ENST00000545358 hCG_1984214I3L0E3 225 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 SPTLC2O15270 562 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 CTAGE5O15320 804 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 PPP6R2O75170 966 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 BMP15O95972 392 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 SCG2P13521 617 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 LIG1P18858 919 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 CALML3P27482 149 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 GUCY1A2P33402 732 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 SHMT1P34896 483 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 ME1P48163 572 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 RBM5P52756 815 aaKnown RBP eCLIP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 MDM2Q00987 491 aaPredicted RBP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 NFIAQ12857 509 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 SF3A1Q15459 793 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 MAP3K11Q16584 847 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 AMHR2Q16671 573 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 PFKFB3Q16875 520 aaPredicted RBP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 CFAP100Q494V2 611 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 ASPRV1Q53RT3 343 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 RILPL1Q5EBL4 403 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 ADALQ6DHV7 355 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 RBM43Q6ZSC3 357 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 METTL16Q86W50 562 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 SRBD1Q8N5C6 995 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 ZNF713Q8N859 430 aaPredicted RBP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 MTMR14Q8NCE2 650 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 DAGLBQ8NCG7 672 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 AGBL3Q8NEM8 1001 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 CCDC148Q8NFR7 591 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 MRPS27Q92552 414 aaKnown RBP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 CEP95Q96GE4 821 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 GMLQ99445 158 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 PHF20Q9BVI0 1012 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 TRIM34Q9BYJ4 488 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 FTOQ9C0B1 505 aaKnown RBP eCLIP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 TAOK3Q9H2K8 898 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 SH3GLB2Q9NR46 395 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 KCNQ5Q9NR82 932 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 ZNF277Q9NRM2 450 aaPredicted RBP6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 MAD2L2Q9UI95 211 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 ZNRF3Q9ULT6 936 aa6.28□□□□□ -1.4
NPIPB3-214ENST00000545358 STX8Q9UNK0 236 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms