RNA–Protein interactions for RNA: ENST00000544551.5

RDX-218, Transcript of radixin, humanhuman

TSL 2 BASIC

Gene RDX, Length 4,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-218ENST00000544551 TSG101Q99816 390 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 ARPP21Q9UBL0 812 aaPredicted RBP16.66■□□□□ 0.26
RDX-218ENST00000544551 EPN1Q9Y6I3 576 aaPredicted RBP16.66■□□□□ 0.26
RDX-218ENST00000544551 NFAT5O94916 1531 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 SRGAP2O75044 1071 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 PNMA6AP0CW24 399 aaPredicted RBP16.66■□□□□ 0.26
RDX-218ENST00000544551 ZSCAN20P17040 1043 aaPredicted RBP16.66■□□□□ 0.26
RDX-218ENST00000544551 ERCC5P28715 1186 aaPredicted RBP16.66■□□□□ 0.26
RDX-218ENST00000544551 PRCPP42785 496 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 PLS1Q14651 629 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 PPP2R5BQ15173 497 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 PIGSQ96S52 555 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 KANSL2Q9H9L4 492 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 CD44P16070 742 aaKnown RBP16.66■□□□□ 0.26
RDX-218ENST00000544551 FXR1P51114 621 aaKnown RBP eCLIP16.66■□□□□ 0.26
RDX-218ENST00000544551 SV2BQ7L1I2 683 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 FCHSD1Q86WN1 690 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 REXO1Q8N1G1 1221 aaKnown RBP16.66■□□□□ 0.26
RDX-218ENST00000544551 TRIML1Q8N9V2 468 aa16.66■□□□□ 0.26
RDX-218ENST00000544551 TMCO5BA8MYB1 307 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 GTPBP6O43824 516 aaPredicted RBP16.65■□□□□ 0.26
RDX-218ENST00000544551 FAM107BQ9H098 131 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 ATP8A2Q9NTI2 1148 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 EFCAB8A8MWE9 144 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 CXCR5P32302 372 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 CHP1Q99653 195 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.65■□□□□ 0.266e-7■■□□□ 12.2
RDX-218ENST00000544551 PAFAH1B1P43034 410 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 HLTFQ14527 1009 aaKnown RBP eCLIP16.65■□□□□ 0.26
RDX-218ENST00000544551 USH1GQ495M9 461 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 RRAGAQ7L523 313 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 TC2NQ8N9U0 490 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 JAKMIP2Q96AA8 810 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 PYM1Q9BRP8 204 aaKnown RBP16.65■□□□□ 0.26
RDX-218ENST00000544551 TRIM10Q9UDY6 481 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 GGA1Q9UJY5 639 aa16.65■□□□□ 0.26
RDX-218ENST00000544551 A0A0U1RQJ8 604 aa16.64■□□□□ 0.26
RDX-218ENST00000544551 ATRIPQ8WXE1 791 aa16.64■□□□□ 0.26
RDX-218ENST00000544551 PKD2L1Q9P0L9 805 aa16.64■□□□□ 0.26
RDX-218ENST00000544551 NTSR2O95665 410 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 CACNB3P54284 484 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 ZYXQ15942 572 aaKnown RBP16.64■□□□□ 0.25
RDX-218ENST00000544551 VGLL2Q8N8G2 317 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 NSUN4Q96CB9 384 aaKnown RBP16.64■□□□□ 0.25
RDX-218ENST00000544551 BPIFA3Q9BQP9 254 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 RSPH14Q9UHP6 348 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 HPSEQ9Y251 543 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 WNT7AO00755 349 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 FGFR2P21802 821 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 PRPF4BQ13523 1007 aaKnown RBP16.64■□□□□ 0.25
RDX-218ENST00000544551 NFIXQ14938 502 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 DPP8Q6V1X1 898 aaPredicted RBP16.64■□□□□ 0.25
RDX-218ENST00000544551 RAD9BQ6WBX8 426 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 PTF1AQ7RTS3 328 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 IFT81Q8WYA0 676 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 GJA10Q969M2 543 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 PDE11AQ9HCR9 933 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 A0A087X0B3 334 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 TUBB4AP04350 444 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 ST5P78524 1137 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 CALCRLQ16602 461 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 TBCKQ8TEA7 893 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 SPAG5Q96R06 1193 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 TUBGCP2Q9BSJ2 902 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 HDAC6Q9UBN7 1215 aa16.64■□□□□ 0.25
RDX-218ENST00000544551 TTF2Q9UNY4 1162 aaKnown RBP16.64■□□□□ 0.25
RDX-218ENST00000544551 DDAH1O94760 285 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 PLCG1P19174 1290 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 GBP3Q9H0R5 595 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 SNAP25P60880 206 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 HERC4Q5GLZ8 1057 aaPredicted RBP16.63■□□□□ 0.25
RDX-218ENST00000544551 FER1L4A9Z1Z3 1794 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 WDR19Q8NEZ3 1342 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
RDX-218ENST00000544551 USP8P40818 1118 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 TROAPQ12815 778 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 TMEM260Q9NX78 707 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 BCCIPQ9P287 314 aaKnown RBP eCLIP16.63■□□□□ 0.25
RDX-218ENST00000544551 TACC3Q9Y6A5 838 aa16.63■□□□□ 0.25
RDX-218ENST00000544551 CHMP2AO43633 222 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 KRT83P78385 493 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 UBE2SQ16763 222 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 KCTD1Q719H9 257 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 FAM114A1Q8IWE2 563 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 GPR161Q8N6U8 529 aaKnown RBP16.62■□□□□ 0.25
RDX-218ENST00000544551 CEP89Q96ST8 783 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 PCDHA4Q9UN74 947 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 CTDP1Q9Y5B0 961 aaPredicted RBP16.62■□□□□ 0.25
RDX-218ENST00000544551 BUB1O43683 1085 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 RAPGEF1Q13905 1077 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 DCAF17Q5H9S7 520 aaPredicted RBP16.62■□□□□ 0.25
RDX-218ENST00000544551 KIAA0825Q8IV33 1275 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 TMEM47Q9BQJ4 181 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 CWC15Q9P013 229 aaKnown RBP16.62■□□□□ 0.25
RDX-218ENST00000544551 IBSPP21815 317 aaPredicted RBP16.62■□□□□ 0.25
RDX-218ENST00000544551 LONRF2Q1L5Z9 754 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 MAEAQ7L5Y9 396 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 TMEM60Q9H2L4 133 aa16.62■□□□□ 0.25
RDX-218ENST00000544551 LTN1O94822 1766 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms