RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 PRPF38AQ8NAV1 312 aaKnown RBP17.22■□□□□ 0.35
MSRB3-209ENST00000540804 EVI5LQ96CN4 794 aa17.22■□□□□ 0.35
MSRB3-209ENST00000540804 ZNF287Q9HBT7 754 aa17.22■□□□□ 0.35
MSRB3-209ENST00000540804 SLC5A4Q9NY91 659 aa17.22■□□□□ 0.35
MSRB3-209ENST00000540804 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
MSRB3-209ENST00000540804 COL11A1P12107 1806 aaPredicted RBP17.21■□□□□ 0.35
MSRB3-209ENST00000540804 FRMPD3Q5JV73 1810 aa17.21■□□□□ 0.35
MSRB3-209ENST00000540804 TRIOBPQ9H2D6 2365 aa17.21■□□□□ 0.35
MSRB3-209ENST00000540804 PLIN4Q96Q06 1357 aa17.21■□□□□ 0.35
MSRB3-209ENST00000540804 SNAP25P60880 206 aa17.21■□□□□ 0.35
MSRB3-209ENST00000540804 EXOC6Q8TAG9 804 aa17.21■□□□□ 0.35
MSRB3-209ENST00000540804 FERMT2Q96AC1 680 aa17.21■□□□□ 0.35
MSRB3-209ENST00000540804 TINF2Q9BSI4 451 aa17.21■□□□□ 0.35
MSRB3-209ENST00000540804 TEX13BQ9BXU2 312 aa17.21■□□□□ 0.35
MSRB3-209ENST00000540804 IL17RBQ9NRM6 502 aa17.21■□□□□ 0.35
MSRB3-209ENST00000540804 ISY1Q9ULR0 285 aaKnown RBP17.21■□□□□ 0.35
MSRB3-209ENST00000540804 TMEM232C9JQI7 657 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 ZBED4O75132 1171 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 BMP3P12645 472 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 BMP8BP34820 402 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 RTP1P59025 263 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 LRRC41Q15345 812 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 ZNF589Q86UQ0 364 aaPredicted RBP17.2■□□□□ 0.34
MSRB3-209ENST00000540804 GMCL1P1Q8NEA9 526 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 SLC38A10Q9HBR0 1119 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 FEM1BQ9UK73 627 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 MTMR7Q9Y216 660 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 ATP11BQ9Y2G3 1177 aa17.2■□□□□ 0.34
MSRB3-209ENST00000540804 LAMA3Q16787 3333 aa17.19■□□□□ 0.34
MSRB3-209ENST00000540804 A0A1W2PPC1 479 aa17.19■□□□□ 0.34
MSRB3-209ENST00000540804 PGK1P00558 417 aa17.19■□□□□ 0.34
MSRB3-209ENST00000540804 SLC3A2P08195 630 aaKnown RBP17.19■□□□□ 0.34
MSRB3-209ENST00000540804 ZNF865P0CJ78 1059 aaPredicted RBP17.19■□□□□ 0.34
MSRB3-209ENST00000540804 MCCP23508 829 aa17.19■□□□□ 0.34
MSRB3-209ENST00000540804 ADCYAP1R1P41586 468 aa17.19■□□□□ 0.34
MSRB3-209ENST00000540804 NMIQ13287 307 aaPredicted RBP17.19■□□□□ 0.34
MSRB3-209ENST00000540804 ARRDC4Q8NCT1 418 aa17.19■□□□□ 0.34
MSRB3-209ENST00000540804 UBE2OQ9C0C9 1292 aaKnown RBP17.19■□□□□ 0.34
MSRB3-209ENST00000540804 CTDP1Q9Y5B0 961 aaPredicted RBP17.19■□□□□ 0.34
MSRB3-209ENST00000540804 DNAH12Q6ZR08 3092 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 TSPY2A6NKD2 308 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 TRIM6-TRIM34B2RNG4 842 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 KBTBD13C9JR72 458 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 RANBP6O60518 1105 aaKnown RBP17.18■□□□□ 0.34
MSRB3-209ENST00000540804 IRX5P78411 483 aaPredicted RBP17.18■□□□□ 0.34
MSRB3-209ENST00000540804 SLC39A5Q6ZMH5 540 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 KCTD1Q719H9 257 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 DDX11Q96FC9 970 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 HELLSQ9NRZ9 838 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 HOMER2Q9NSB8 354 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 STX8Q9UNK0 236 aa17.18■□□□□ 0.34
MSRB3-209ENST00000540804 DIS3Q9Y2L1 958 aaKnown RBP17.18■□□□□ 0.34
MSRB3-209ENST00000540804 DNAJC25-GNG10A0A024R161 153 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 ATP2A1O14983 1001 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 SNAI1O95863 264 aaPredicted RBP17.17■□□□□ 0.34
MSRB3-209ENST00000540804 FGAP02671 866 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 COPB2P35606 906 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 TRIM60Q495X7 471 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 MCMDC2Q4G0Z9 681 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 FGD4Q96M96 766 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 AGBL1Q96MI9 1066 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 XPNPEP3Q9NQH7 507 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
MSRB3-209ENST00000540804 DDX49Q9Y6V7 483 aaKnown RBP17.17■□□□□ 0.34
MSRB3-209ENST00000540804 HAND2P61296 217 aa17.16■□□□□ 0.34
MSRB3-209ENST00000540804 IKQ13123 557 aaPredicted RBP17.16■□□□□ 0.34
MSRB3-209ENST00000540804 RRP12Q5JTH9 1297 aaKnown RBP17.16■□□□□ 0.34
MSRB3-209ENST00000540804 TDHQ8IZJ6 230 aa17.16■□□□□ 0.34
MSRB3-209ENST00000540804 TOMM22Q9NS69 142 aa17.16■□□□□ 0.34
MSRB3-209ENST00000540804 ZNF536O15090 1300 aa17.16■□□□□ 0.34
MSRB3-209ENST00000540804 ADCY6O43306 1168 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 HSPD1P10809 573 aaKnown RBP17.15■□□□□ 0.34
MSRB3-209ENST00000540804 RARBP10826 455 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 SLC1A4P43007 532 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 STAT2P52630 851 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 CNTN2Q02246 1040 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 ALX1Q15699 326 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 CCDC174Q6PII3 467 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 Q7L0L9 218 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 SH3RF1Q7Z6J0 888 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 CHD1LQ86WJ1 897 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 PLEKHM2Q8IWE5 1019 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 ANKRD35Q8N283 1001 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 GMCL1Q96IK5 515 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 RWDD1Q9H446 243 aaPredicted RBP17.15■□□□□ 0.34
MSRB3-209ENST00000540804 PRDM5Q9NQX1 630 aaPredicted RBP17.15■□□□□ 0.34
MSRB3-209ENST00000540804 ZHX1Q9UKY1 873 aaPredicted RBP17.15■□□□□ 0.34
MSRB3-209ENST00000540804 SYNPO2Q9UMS6 1093 aa17.15■□□□□ 0.34
MSRB3-209ENST00000540804 MYH4Q9Y623 1939 aa17.14■□□□□ 0.33
MSRB3-209ENST00000540804 MYADML2A6NDP7 307 aa17.14■□□□□ 0.33
MSRB3-209ENST00000540804 ORC4O43929 436 aa17.14■□□□□ 0.33
MSRB3-209ENST00000540804 AKR1A1P14550 325 aa17.14■□□□□ 0.33
MSRB3-209ENST00000540804 TTBK2Q6IQ55 1244 aa17.14■□□□□ 0.33
MSRB3-209ENST00000540804 NRBP1Q9UHY1 535 aa17.14■□□□□ 0.33
MSRB3-209ENST00000540804 CNPY2Q9Y2B0 182 aa17.14■□□□□ 0.33
MSRB3-209ENST00000540804 ADAMTS4O75173 837 aa17.13■□□□□ 0.33
MSRB3-209ENST00000540804 FGRP09769 529 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms