RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 IRX3P78415 501 aaPredicted RBP12.36□□□□□ -0.43
ATL3-204ENST00000540699 SP3Q02447 781 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 APOBRQ0VD83 1088 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 HABP4Q5JVS0 413 aaKnown RBP12.36□□□□□ -0.43
ATL3-204ENST00000540699 SLFN13Q68D06 897 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 CCDC83Q8IWF9 413 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 IGDCC4Q8TDY8 1250 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 GTF3C2Q8WUA4 911 aaPredicted RBP12.36□□□□□ -0.43
ATL3-204ENST00000540699 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 UBAC1Q9BSL1 405 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 GPHNQ9NQX3 736 aaPredicted RBP12.36□□□□□ -0.43
ATL3-204ENST00000540699 MORF4L1Q9UBU8 362 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 ADAMTS5Q9UNA0 930 aa12.36□□□□□ -0.43
ATL3-204ENST00000540699 MYH6P13533 1939 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 SPDYE16A6NNV3 312 aaPredicted RBP12.35□□□□□ -0.43
ATL3-204ENST00000540699 PFKFB2O60825 505 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 DSG3P32926 999 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 COG2Q14746 738 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 FAM83BQ5T0W9 1011 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 NECAB1Q8N987 351 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 DCAF4Q8WV16 495 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 GTF3C6Q969F1 213 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 ZNF274Q96GC6 653 aaPredicted RBP12.35□□□□□ -0.43
ATL3-204ENST00000540699 TANGO6Q9C0B7 1094 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 HOXC10Q9NYD6 342 aa12.35□□□□□ -0.43
ATL3-204ENST00000540699 POTEFA5A3E0 1075 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 IFIT3O14879 490 aaKnown RBP12.34□□□□□ -0.43
ATL3-204ENST00000540699 PDHBP11177 359 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 BMP3P12645 472 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 PDIA3P30101 505 aaKnown RBP12.34□□□□□ -0.43
ATL3-204ENST00000540699 LIFRP42702 1097 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 FGD1P98174 961 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 SCRN1Q12765 414 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
ATL3-204ENST00000540699 FAM110CQ1W6H9 321 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 IFIT1BQ5T764 474 aaKnown RBP12.34□□□□□ -0.43
ATL3-204ENST00000540699 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 PNMA1Q8ND90 353 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 SMCR8Q8TEV9 937 aaPredicted RBP12.34□□□□□ -0.43
ATL3-204ENST00000540699 ARMC5Q96C12 935 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 NUP88Q99567 741 aaPredicted RBP12.34□□□□□ -0.43
ATL3-204ENST00000540699 LY9Q9HBG7 655 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 RBPJLQ9UBG7 517 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 CPA4Q9UI42 421 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 FEM1BQ9UK73 627 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 BRPF3Q9ULD4 1205 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 PPP1R9AQ9ULJ8 1098 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 RABGAP1Q9Y3P9 1069 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
ATL3-204ENST00000540699 PLXNB2O15031 1838 aa12.34□□□□□ -0.43
ATL3-204ENST00000540699 SMCHD1A6NHR9 2005 aa12.33□□□□□ -0.43
ATL3-204ENST00000540699 NID2Q14112 1375 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 ZNFX1Q9P2E3 1918 aaKnown RBP12.33□□□□□ -0.44
ATL3-204ENST00000540699 CNMDO75829 334 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 FLOT1O75955 427 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 SLC1A4P43007 532 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 WTAPQ15007 396 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 TMEM67Q5HYA8 995 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 BTNL9Q6UXG8 535 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 RASGRP2Q7LDG7 609 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 MB21D1Q8N884 522 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 SLF1Q9BQI6 1058 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 KAT14Q9H8E8 782 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 SENP2Q9HC62 589 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 TXNRD2Q9NNW7 524 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 FBXO28Q9NVF7 368 aa12.33□□□□□ -0.44
ATL3-204ENST00000540699 BAZ2BQ9UIF8 2168 aaKnown RBP12.33□□□□□ -0.44
ATL3-204ENST00000540699 ZNF236Q9UL36 1845 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 CEP290O15078 2479 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 KLF18A0A0U1RQI7 1052 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 ERICH2A1L162 156 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 STAT2P52630 851 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 ERVK-9P63128 1117 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 ERVK-24P63145 666 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 LACTBP83111 547 aaPredicted RBP12.32□□□□□ -0.44
ATL3-204ENST00000540699 ZNF543Q08ER8 600 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 TROAPQ12815 778 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 STK3Q13188 491 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 FAM160B2Q86V87 743 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 TMTC2Q8N394 836 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 ANKRD13CQ8N6S4 541 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 PRPF38AQ8NAV1 312 aaKnown RBP12.32□□□□□ -0.44
ATL3-204ENST00000540699 REPS2Q8NFH8 660 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 SMARCC2Q8TAQ2 1214 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 ATG4CQ96DT6 458 aa12.32□□□□□ -0.44
ATL3-204ENST00000540699 TMEM232C9JQI7 657 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 VWA5AO00534 786 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 RAD21O60216 631 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 CTDNEP1O95476 244 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 FDX1P10109 184 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 GJB2P29033 226 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 NUCB2P80303 420 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 PKP1Q13835 747 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 GPATCH4Q5T3I0 446 aaKnown RBP12.31□□□□□ -0.44
ATL3-204ENST00000540699 APOA5Q6Q788 366 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 KCTD1Q719H9 257 aa12.31□□□□□ -0.44
ATL3-204ENST00000540699 NSUN7Q8NE18 718 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms