RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 SLC27A2O14975 620 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 POLE2P56282 527 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 RESTQ13127 1097 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 SULT6B1Q6IMI4 303 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 ZNF280DQ6N043 979 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 OLFML1Q6UWY5 402 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 LCA5Q86VQ0 697 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 RNF168Q8IYW5 571 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-214ENST00000540539 TSPYL6Q8N831 410 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 SPIRE2Q8WWL2 714 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 OPTNQ96CV9 577 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 RRP36Q96EU6 259 aaKnown RBP10.53□□□□□ -0.72
CLIP1-214ENST00000540539 RUFY1Q96T51 708 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 NAPGQ99747 312 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-214ENST00000540539 MTA3Q9BTC8 594 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 BRD8Q9H0E9 1235 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 ATXN10Q9UBB4 475 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 IGSF1Q8N6C5 1336 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 E7EVH7 732 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 ABL1P00519 1130 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 BPIFB4P59827 614 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 AMPD2Q01433 879 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 MAP3K12Q12852 859 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 KCTD16Q68DU8 428 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 CCNI2Q6ZMN8 369 aaPredicted RBP10.53□□□□□ -0.72
CLIP1-214ENST00000540539 AENQ8WTP8 325 aaKnown RBP10.53□□□□□ -0.72
CLIP1-214ENST00000540539 API5Q9BZZ5 524 aaKnown RBP10.53□□□□□ -0.72
CLIP1-214ENST00000540539 NDST4Q9H3R1 872 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 BTG4Q9NY30 223 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 CEP126Q9P2H0 1117 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 ADGRG1Q9Y653 693 aa10.53□□□□□ -0.72
CLIP1-214ENST00000540539 SOWAHDA6NJG2 315 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-214ENST00000540539 GFPT2O94808 682 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 CA8P35219 290 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 APBA1Q02410 837 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 ADCY1Q08828 1119 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 TMED1Q13445 227 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 ANKRD20A2Q5SQ80 823 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 ANKRD20A1Q5TYW2 823 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 ANKRD20A3Q5VUR7 823 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 FSIP1Q8NA03 581 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 HVCN1Q96D96 273 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLIP1-214ENST00000540539 FTOQ9C0B1 505 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLIP1-214ENST00000540539 KIAA1468Q9P260 1216 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 COL5A2P05997 1499 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-214ENST00000540539 PENKP01210 267 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-214ENST00000540539 CLTAP09496 248 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 ADCK5Q3MIX3 580 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 ZMYM1Q5SVZ6 1142 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 SND1Q7KZF4 910 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLIP1-214ENST00000540539 PNMA8AQ86V59 439 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-214ENST00000540539 APLFQ8IW19 511 aaPredicted RBP10.52□□□□□ -0.73
CLIP1-214ENST00000540539 SLF2Q8IX21 1173 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 TEX9Q8N6V9 391 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 USHBP1Q8N6Y0 703 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 EHBP1Q8NDI1 1231 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 SDF4Q9BRK5 362 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 LSG1Q9H089 658 aaKnown RBP10.52□□□□□ -0.73
CLIP1-214ENST00000540539 PANK4Q9NVE7 773 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 NLRP2Q9NX02 1062 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 CFAP45Q9UL16 551 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 FAM184BQ9ULE4 1060 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 LRP6O75581 1613 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 PLCH1Q4KWH8 1693 aa10.52□□□□□ -0.73
CLIP1-214ENST00000540539 EVI5O60447 810 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 VIMP08670 466 aaKnown RBP10.51□□□□□ -0.73
CLIP1-214ENST00000540539 PRKAR2BP31323 418 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 STAT6P42226 847 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 PSMC4P43686 418 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 EVA1CP58658 441 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 CBX3Q13185 183 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 NNTQ13423 1086 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 ALS2CLQ60I27 953 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 ANO7Q6IWH7 933 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 HOOK3Q86VS8 718 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 CCDC155Q8N6L0 562 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 NDNQ99608 321 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 SYT15Q9BQS2 421 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 STRN4Q9NRL3 753 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 FAM208AQ9UK61 1670 aaKnown RBP10.51□□□□□ -0.73
CLIP1-214ENST00000540539 NEDD4P46934 1319 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 KIF5BP33176 963 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 MAEAQ7L5Y9 396 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 IQCF2Q8IXL9 164 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 ATP11CQ8NB49 1132 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 C8orf76Q96K31 380 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 TRAIPQ9BWF2 469 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 RHBDL2Q9NX52 303 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 SYNPO2Q9UMS6 1093 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 LEMD3Q9Y2U8 911 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 GMEB1Q9Y692 573 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 WDR17Q8IZU2 1322 aa10.51□□□□□ -0.73
CLIP1-214ENST00000540539 PALM3A6NDB9 673 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-214ENST00000540539 ABLIM1O14639 778 aa10.5□□□□□ -0.73
CLIP1-214ENST00000540539 PPIP5K2O43314 1243 aa10.5□□□□□ -0.73
CLIP1-214ENST00000540539 ALADP13716 330 aa10.5□□□□□ -0.73
CLIP1-214ENST00000540539 ALOX15P16050 662 aaPredicted RBP10.5□□□□□ -0.73
CLIP1-214ENST00000540539 MDH1P40925 334 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms