RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 KIFC2Q96AC6 838 aa10.69□□□□□ -0.7
LMO3-222ENST00000540445 FAM227BQ96M60 508 aa10.69□□□□□ -0.7
LMO3-222ENST00000540445 MMP19Q99542 508 aa10.69□□□□□ -0.7
LMO3-222ENST00000540445 STX8Q9UNK0 236 aa10.69□□□□□ -0.7
LMO3-222ENST00000540445 LAMA2P24043 3122 aaKnown RBP10.68□□□□□ -0.7
LMO3-222ENST00000540445 A0A1W2PPC1 479 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 MSCO60682 206 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 FGAP02671 866 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 MYCNP04198 464 aaPredicted RBP10.68□□□□□ -0.7
LMO3-222ENST00000540445 BMP3P12645 472 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 CYBAP13498 195 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 COPB2P35606 906 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 IKQ13123 557 aaPredicted RBP10.68□□□□□ -0.7
LMO3-222ENST00000540445 NMIQ13287 307 aaPredicted RBP10.68□□□□□ -0.7
LMO3-222ENST00000540445 RRP12Q5JTH9 1297 aaKnown RBP10.68□□□□□ -0.7
LMO3-222ENST00000540445 PPP4R3BQ5MIZ7 849 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 PRAMEF19Q5SWL8 479 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 TICAM2Q86XR7 235 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 PLEKHM2Q8IWE5 1019 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 C7orf61Q8IZ16 206 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 ABRAQ8N0Z2 381 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 GDF15Q99988 308 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 DDX20Q9UHI6 824 aaKnown RBP10.68□□□□□ -0.7
LMO3-222ENST00000540445 FEM1BQ9UK73 627 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 MTMR7Q9Y216 660 aa10.68□□□□□ -0.7
LMO3-222ENST00000540445 MYH6P13533 1939 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 A0A0D9SFI3 127 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 TMEM232C9JQI7 657 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 PGK2P07205 417 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 HSPD1P10809 573 aaKnown RBP10.67□□□□□ -0.7
LMO3-222ENST00000540445 SDSP20132 328 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 MCCP23508 829 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 BMP8BP34820 402 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 SLC1A4P43007 532 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 MFAP1P55081 439 aaKnown RBP10.67□□□□□ -0.7
LMO3-222ENST00000540445 IRX6P78412 446 aaPredicted RBP10.67□□□□□ -0.7
LMO3-222ENST00000540445 ALX1Q15699 326 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 ANO1Q5XXA6 986 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 SNRNP48Q6IEG0 339 aaKnown RBP10.67□□□□□ -0.7
LMO3-222ENST00000540445 GMCL1P1Q8NEA9 526 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 MAML3Q96JK9 1138 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 TEX13BQ9BXU2 312 aa10.67□□□□□ -0.7
LMO3-222ENST00000540445 SENP6Q9GZR1 1112 aaPredicted RBP10.67□□□□□ -0.7
LMO3-222ENST00000540445 ZNF214Q9UL59 606 aaPredicted RBP10.67□□□□□ -0.7
LMO3-222ENST00000540445 PLIN4Q96Q06 1357 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 FOXP2O15409 715 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 NMT2O60551 498 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 STAT2P52630 851 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 HAND2P61296 217 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 LRRC26Q2I0M4 334 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 CWC27Q6UX04 472 aaKnown RBP10.66□□□□□ -0.7
LMO3-222ENST00000540445 ARRDC4Q8NCT1 418 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 CHURC1Q8WUH1 139 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 OSBPL3Q9H4L5 887 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 RAVER2Q9HCJ3 691 aaKnown RBP10.66□□□□□ -0.7
LMO3-222ENST00000540445 IL17RBQ9NRM6 502 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 ANAPC4Q9UJX5 808 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 ZMYND8Q9ULU4 1186 aaPredicted RBP10.66□□□□□ -0.7
LMO3-222ENST00000540445 SYNPO2Q9UMS6 1093 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 RIPK3Q9Y572 518 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 LCTP09848 1927 aa10.66□□□□□ -0.7
LMO3-222ENST00000540445 CCDC171Q6TFL3 1326 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 SEPT4O43236 478 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 GJC2Q5T442 439 aaPredicted RBP10.65□□□□□ -0.7
LMO3-222ENST00000540445 RCSD1Q6JBY9 416 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 MFSD6Q6ZSS7 791 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 KCTD1Q719H9 257 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 ZNF589Q86UQ0 364 aaPredicted RBP10.65□□□□□ -0.7
LMO3-222ENST00000540445 ANKRD35Q8N283 1001 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 STAG1Q8WVM7 1258 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 TINF2Q9BSI4 451 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 SLC38A10Q9HBR0 1119 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 DIAPH3Q9NSV4 1193 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 DIS3Q9Y2L1 958 aaKnown RBP10.65□□□□□ -0.7
LMO3-222ENST00000540445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.65□□□□□ -0.7
LMO3-222ENST00000540445 COL6A3P12111 3177 aa10.65□□□□□ -0.7
LMO3-222ENST00000540445 LAMA4Q16363 1823 aa10.65□□□□□ -0.71
LMO3-222ENST00000540445 KBTBD13C9JR72 458 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 HIP1O00291 1037 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 DNM1LO00429 736 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
LMO3-222ENST00000540445 ZNF213O14771 459 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 ATP2A1O14983 1001 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 ORC4O43929 436 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 FDX1P10109 184 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 SYN1P17600 705 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 ATN1P54259 1190 aaPredicted RBP10.64□□□□□ -0.71
LMO3-222ENST00000540445 ZNF792Q3KQV3 632 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
LMO3-222ENST00000540445 FAM160B2Q86V87 743 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 GMCL1Q96IK5 515 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 HOMER2Q9NSB8 354 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 CNPY2Q9Y2B0 182 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 TACC3Q9Y6A5 838 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 LRRC37A2A6NM11 1700 aa10.64□□□□□ -0.71
LMO3-222ENST00000540445 FGRP09769 529 aa10.63□□□□□ -0.71
LMO3-222ENST00000540445 HOXD11P31277 338 aaPredicted RBP10.63□□□□□ -0.71
LMO3-222ENST00000540445 MAGEA10P43363 369 aaPredicted RBP10.63□□□□□ -0.71
LMO3-222ENST00000540445 OAZ1P54368 228 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms