RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 CALM1P0DP23 149 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 CALM2P0DP24 149 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 CALM3P0DP25 149 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 PDHBP11177 359 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 IFNAR1P17181 557 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 ZNF165P49910 485 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 PLCB2Q00722 1185 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 USP50Q70EL3 339 aaPredicted RBP14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 SULF1Q8IWU6 871 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 ACER1Q8TDN7 264 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 KCNF1Q9H3M0 494 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 KANSL2Q9H9L4 492 aa14.86□□□□□ -0.03
CDK5RAP3-202ENST00000536708 A0A1W2PQ27 194 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 A0A1W2PQ64 194 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 A0A1W2PQD8 194 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 IQCA1LA6NCM1 817 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 MYRIPQ8NFW9 859 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 ZKSCAN4Q969J2 545 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 WRNIP1Q96S55 665 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 CABP5Q9NP86 173 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 FMNL1O95466 1100 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 CDC25BP30305 580 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 FAM160A1Q05DH4 1040 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 IQCB1Q15051 598 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 ZYXQ15942 572 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 SARM1Q6SZW1 724 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 CCDC73Q6ZRK6 1079 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 SMAP1Q8IYB5 467 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 FBXO18Q8NFZ0 1043 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 SHISA4Q96DD7 197 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 NUP88Q99567 741 aaPredicted RBP14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 GOLPH3LQ9H4A5 285 aa14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 RBM28Q9NW13 759 aaKnown RBP14.85□□□□□ -0.03
CDK5RAP3-202ENST00000536708 PARP14Q460N5 1801 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 CYTH3O43739 400 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 CDKL5O76039 1030 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 YEATS4O95619 227 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 VEGFAP15692 232 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 ZNF75DP51815 510 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 FMR1Q06787 632 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 DGKZQ13574 1117 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 KIAA1755Q5JYT7 1200 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 ADALQ6DHV7 355 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 CPLX2Q6PUV4 134 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 SPICE1Q8N0Z3 855 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 NMRK2Q9NPI5 230 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 NYAP2Q9P242 653 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 PPP2R3BQ9Y5P8 575 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 STK36Q9NRP7 1315 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 CCDC196A0A1B0GTZ2 297 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 PALM3A6NDB9 673 aaPredicted RBP14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 PARP1P09874 1014 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 SSRP1Q08945 709 aaKnown RBP14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 STX1AQ16623 288 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 KCTD1Q719H9 257 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 FTOQ9C0B1 505 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 DNAJC25Q9H1X3 360 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 RRAGCQ9HB90 399 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 GPCPD1Q9NPB8 672 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 POLR3EQ9NVU0 708 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 PRDM4Q9UKN5 801 aa14.84□□□□□ -0.03
CDK5RAP3-202ENST00000536708 SNHG28P0DPA3 235 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KIF5BP33176 963 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CEBPZQ03701 1054 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CCDC96Q2M329 555 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 MAP1SQ66K74 1059 aaPredicted RBP14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 LINC00301Q8NCQ3 95 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CDCA5Q96FF9 252 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 C8orf76Q96K31 380 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ALG1Q9BT22 464 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ZNF341Q9BYN7 854 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 UBA5Q9GZZ9 404 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SMCHD1A6NHR9 2005 aa14.83□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KLRF2D3W0D1 207 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KINO60870 393 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 NDUFB10O96000 172 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ASNSP08243 561 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 GTF2F1P35269 517 aaKnown RBP eCLIP14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PKN1Q16512 942 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 DCAF15Q66K64 600 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 TTBK2Q6IQ55 1244 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 MOB2Q70IA6 237 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 FMR1NBQ8N0W7 255 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KCNG4Q8TDN1 519 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PYCARDQ9ULZ3 195 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 PCDHA7Q9UN72 937 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 V9GY48 417 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 TRAF5O00463 557 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SLC16A2P36021 539 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ZNF543Q08ER8 600 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 TRIM22Q8IYM9 498 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 SPC24Q8NBT2 197 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 MRPS27Q92552 414 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 MKL1Q969V6 931 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 KLRG1Q96E93 195 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 MAP3K14Q99558 947 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 RNF26Q9BY78 433 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 ANO10Q9NW15 660 aa14.82□□□□□ -0.04
CDK5RAP3-202ENST00000536708 CLEC11AQ9Y240 323 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms