RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ETV2O00321 342 aaPredicted RBP5.97□□□□□ -1.45
YBX3-205ENST00000536107 EXOC5O00471 708 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 HCLS1P14317 486 aaPredicted RBP5.97□□□□□ -1.45
YBX3-205ENST00000536107 USP5P45974 858 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 CLCN7P51798 805 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 LINC00310P59036 64 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 NKPD1Q17RQ9 610 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 KIF4BQ2VIQ3 1234 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 TMEM164Q5U3C3 297 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 TMEM132EQ6IEE7 984 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 CCDC86Q9H6F5 360 aaKnown RBP5.97□□□□□ -1.45
YBX3-205ENST00000536107 RGPD3A6NKT7 1758 aaPredicted RBP5.97□□□□□ -1.45
YBX3-205ENST00000536107 RGPD4Q7Z3J3 1758 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 PRAG1Q86YV5 1406 aa5.97□□□□□ -1.45
YBX3-205ENST00000536107 ABCA3Q99758 1704 aa5.96□□□□□ -1.45
YBX3-205ENST00000536107 ATP7BP35670 1465 aa5.96□□□□□ -1.45
YBX3-205ENST00000536107 NUP155O75694 1391 aa5.96□□□□□ -1.45
YBX3-205ENST00000536107 ANKRD30BQ9BXX2 1392 aa5.96□□□□□ -1.45
YBX3-205ENST00000536107 ITPKAP23677 461 aa5.96□□□□□ -1.46
YBX3-205ENST00000536107 MPSTP25325 297 aa5.96□□□□□ -1.46
YBX3-205ENST00000536107 HNRNPUQ00839 825 aaKnown RBP eCLIP5.96□□□□□ -1.46
YBX3-205ENST00000536107 C9orf131Q5VYM1 1079 aa5.96□□□□□ -1.46
YBX3-205ENST00000536107 GALNT12Q8IXK2 581 aa5.96□□□□□ -1.46
YBX3-205ENST00000536107 A0A0G2JLL6 359 aaPredicted RBP5.95□□□□□ -1.46
YBX3-205ENST00000536107 ZNF862O60290 1169 aa5.95□□□□□ -1.46
YBX3-205ENST00000536107 POLR3DP05423 398 aaPredicted RBP5.95□□□□□ -1.46
YBX3-205ENST00000536107 SRFP11831 508 aa5.95□□□□□ -1.46
YBX3-205ENST00000536107 SYN1P17600 705 aa5.95□□□□□ -1.46
YBX3-205ENST00000536107 KRT82Q9NSB4 513 aa5.95□□□□□ -1.46
YBX3-205ENST00000536107 IQGAP3Q86VI3 1631 aa5.95□□□□□ -1.46
YBX3-205ENST00000536107 BRD4O60885 1362 aaPredicted RBP5.94□□□□□ -1.46
YBX3-205ENST00000536107 CRB1P82279 1406 aa5.94□□□□□ -1.46
YBX3-205ENST00000536107 NEFMP07197 916 aa5.94□□□□□ -1.46
YBX3-205ENST00000536107 COL23A1Q86Y22 540 aaPredicted RBP5.94□□□□□ -1.46
YBX3-205ENST00000536107 ISL2Q96A47 359 aa5.94□□□□□ -1.46
YBX3-205ENST00000536107 CARS2Q9HA77 564 aaKnown RBP5.94□□□□□ -1.46
YBX3-205ENST00000536107 KCNK12Q9HB15 430 aa5.94□□□□□ -1.46
YBX3-205ENST00000536107 POGKQ9P215 609 aa5.94□□□□□ -1.46
YBX3-205ENST00000536107 TOPAZ1Q8N9V7 1692 aa5.94□□□□□ -1.46
YBX3-205ENST00000536107 ATG7O95352 703 aa5.93□□□□□ -1.46
YBX3-205ENST00000536107 ATP2B4P23634 1241 aa5.93□□□□□ -1.46
YBX3-205ENST00000536107 PTPN12Q05209 780 aaKnown RBP5.93□□□□□ -1.46
YBX3-205ENST00000536107 FAM50AQ14320 339 aaKnown RBP5.93□□□□□ -1.46
YBX3-205ENST00000536107 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.93□□□□□ -1.46
YBX3-205ENST00000536107 KCNN1Q92952 543 aa5.93□□□□□ -1.46
YBX3-205ENST00000536107 CCDC120Q96HB5 630 aa5.93□□□□□ -1.46
YBX3-205ENST00000536107 IRF2BPLQ9H1B7 796 aa5.93□□□□□ -1.46
YBX3-205ENST00000536107 ZCCHC4Q9H5U6 513 aa5.93□□□□□ -1.46
YBX3-205ENST00000536107 ARHGEF28Q8N1W1 1705 aaKnown RBP5.93□□□□□ -1.46
YBX3-205ENST00000536107 RPGRIP1LQ68CZ1 1315 aa5.93□□□□□ -1.46
YBX3-205ENST00000536107 PLEKHG2Q9H7P9 1386 aa5.93□□□□□ -1.46
YBX3-205ENST00000536107 BCL9O00512 1426 aa5.92□□□□□ -1.46
YBX3-205ENST00000536107 USP6P35125 1406 aa5.92□□□□□ -1.46
YBX3-205ENST00000536107 HSPA8P11142 646 aaKnown RBP5.92□□□□□ -1.46
YBX3-205ENST00000536107 KRTAP10-2P60368 255 aa5.92□□□□□ -1.46
YBX3-205ENST00000536107 KIAA0319Q5VV43 1072 aa5.92□□□□□ -1.46
YBX3-205ENST00000536107 SYTL4Q96C24 671 aaPredicted RBP5.92□□□□□ -1.46
YBX3-205ENST00000536107 PRAM1Q96QH2 718 aa5.92□□□□□ -1.46
YBX3-205ENST00000536107 SSU72Q9NP77 194 aaKnown RBP5.92□□□□□ -1.46
YBX3-205ENST00000536107 RNF181Q9P0P0 153 aa5.92□□□□□ -1.46
YBX3-205ENST00000536107 ABCC11Q96J66 1382 aa5.92□□□□□ -1.46
YBX3-205ENST00000536107 PEAK1Q9H792 1746 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 FMN2Q9NZ56 1722 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 KIAA1210Q9ULL0 1709 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 KCPQ6ZWJ8 1503 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 GNAT3A8MTJ3 354 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 VEGFAP15692 232 aaPredicted RBP5.91□□□□□ -1.46
YBX3-205ENST00000536107 BMP7P18075 431 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 SRPK2P78362 688 aaKnown RBP5.91□□□□□ -1.46
YBX3-205ENST00000536107 NFIXQ14938 502 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 RPS26P11Q5JNZ5 115 aaPredicted RBP5.91□□□□□ -1.46
YBX3-205ENST00000536107 GGNQ86UU5 652 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 NPAS4Q8IUM7 802 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 RNF214Q8ND24 703 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 GCC1Q96CN9 775 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 KCNC2Q96PR1 638 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 ZC3H12CQ9C0D7 883 aaKnown RBP5.91□□□□□ -1.46
YBX3-205ENST00000536107 E9PCH4 1651 aa5.91□□□□□ -1.46
YBX3-205ENST00000536107 ADAMTS20P59510 1910 aa5.9□□□□□ -1.46
YBX3-205ENST00000536107 CLTCL1P53675 1640 aa5.9□□□□□ -1.46
YBX3-205ENST00000536107 PHRF1Q9P1Y6 1649 aaKnown RBP5.9□□□□□ -1.46
YBX3-205ENST00000536107 GCP02774 474 aa5.9□□□□□ -1.46
YBX3-205ENST00000536107 GSTP1P09211 210 aaKnown RBP5.9□□□□□ -1.46
YBX3-205ENST00000536107 NPR3P17342 541 aa5.9□□□□□ -1.46
YBX3-205ENST00000536107 GJD3Q8N144 294 aa5.9□□□□□ -1.46
YBX3-205ENST00000536107 SEMA3GQ9NS98 782 aa5.9□□□□□ -1.46
YBX3-205ENST00000536107 PARP4Q9UKK3 1724 aaKnown RBP5.9□□□□□ -1.47
YBX3-205ENST00000536107 ANKARQ7Z5J8 1434 aa5.9□□□□□ -1.47
YBX3-205ENST00000536107 COL5A2P05997 1499 aaPredicted RBP5.9□□□□□ -1.47
YBX3-205ENST00000536107 MAP2K1Q02750 393 aaPredicted RBP5.89□□□□□ -1.47
YBX3-205ENST00000536107 AAMPQ13685 434 aa5.89□□□□□ -1.47
YBX3-205ENST00000536107 ABHD4Q8TB40 342 aa5.89□□□□□ -1.47
YBX3-205ENST00000536107 BORCS6Q96GS4 357 aa5.89□□□□□ -1.47
YBX3-205ENST00000536107 RTEL1Q9NZ71 1219 aa5.89□□□□□ -1.47
YBX3-205ENST00000536107 CCNL1Q9UK58 526 aaPredicted RBP5.89□□□□□ -1.47
YBX3-205ENST00000536107 ADGRF5Q8IZF2 1346 aa5.89□□□□□ -1.47
YBX3-205ENST00000536107 CPDO75976 1380 aa5.89□□□□□ -1.47
YBX3-205ENST00000536107 CNTNAP1P78357 1384 aa5.89□□□□□ -1.47
YBX3-205ENST00000536107 A0A0G2JLW4 131 aa5.88□□□□□ -1.47
YBX3-205ENST00000536107 FZD6O60353 706 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms