RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 DCAF4Q8WV16 495 aa18.23■□□□□ 0.51
UBXN1-217ENST00000534176 DEFB118Q96PH6 123 aa18.23■□□□□ 0.51
UBXN1-217ENST00000534176 NRBP1Q9UHY1 535 aa18.23■□□□□ 0.51
UBXN1-217ENST00000534176 ZNF214Q9UL59 606 aaPredicted RBP18.23■□□□□ 0.51
UBXN1-217ENST00000534176 PEX10O60683 326 aa18.22■□□□□ 0.51
UBXN1-217ENST00000534176 GSPT1P15170 499 aaKnown RBP18.22■□□□□ 0.51
UBXN1-217ENST00000534176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.22■□□□□ 0.51
UBXN1-217ENST00000534176 LRRC47Q8N1G4 583 aaKnown RBP18.22■□□□□ 0.51
UBXN1-217ENST00000534176 MSL3Q8N5Y2 521 aaKnown RBP18.22■□□□□ 0.51
UBXN1-217ENST00000534176 KRT23Q9C075 422 aa18.22■□□□□ 0.51
UBXN1-217ENST00000534176 SLC38A10Q9HBR0 1119 aa18.22■□□□□ 0.51
UBXN1-217ENST00000534176 IL17RBQ9NRM6 502 aa18.22■□□□□ 0.51
UBXN1-217ENST00000534176 FBXO28Q9NVF7 368 aa18.22■□□□□ 0.51
UBXN1-217ENST00000534176 FARP2O94887 1054 aaPredicted RBP18.21■□□□□ 0.51
UBXN1-217ENST00000534176 IKQ13123 557 aaPredicted RBP18.21■□□□□ 0.51
UBXN1-217ENST00000534176 RRP12Q5JTH9 1297 aaKnown RBP18.21■□□□□ 0.51
UBXN1-217ENST00000534176 SAMD1Q6SPF0 538 aaPredicted RBP18.21■□□□□ 0.51
UBXN1-217ENST00000534176 DGKHQ86XP1 1220 aa18.21■□□□□ 0.51
UBXN1-217ENST00000534176 CHST13Q8NET6 341 aa18.21■□□□□ 0.51
UBXN1-217ENST00000534176 REPS2Q8NFH8 660 aa18.21■□□□□ 0.51
UBXN1-217ENST00000534176 KIFC2Q96AC6 838 aa18.21■□□□□ 0.51
UBXN1-217ENST00000534176 SHISA4Q96DD7 197 aa18.21■□□□□ 0.51
UBXN1-217ENST00000534176 MMP19Q99542 508 aa18.21■□□□□ 0.51
UBXN1-217ENST00000534176 BRCA2P51587 3418 aa18.21■□□□□ 0.51
UBXN1-217ENST00000534176 TMEM232C9JQI7 657 aa18.2■□□□□ 0.5
UBXN1-217ENST00000534176 CACNB2Q08289 660 aaPredicted RBP18.2■□□□□ 0.5
UBXN1-217ENST00000534176 TKFCQ3LXA3 575 aa18.2■□□□□ 0.5
UBXN1-217ENST00000534176 NUP88Q99567 741 aaPredicted RBP18.2■□□□□ 0.5
UBXN1-217ENST00000534176 U3KPZ7 1027 aaPredicted RBP18.2■□□□□ 0.5
UBXN1-217ENST00000534176 LAMA4Q16363 1823 aa18.19■□□□□ 0.5
UBXN1-217ENST00000534176 CHMLP26374 656 aa18.19■□□□□ 0.5
UBXN1-217ENST00000534176 HAND2P61296 217 aa18.19■□□□□ 0.5
UBXN1-217ENST00000534176 TRDNQ13061 729 aa18.19■□□□□ 0.5
UBXN1-217ENST00000534176 SNRNP48Q6IEG0 339 aaKnown RBP18.19■□□□□ 0.5
UBXN1-217ENST00000534176 NECAB2Q7Z6G3 386 aa18.19■□□□□ 0.5
UBXN1-217ENST00000534176 UBE2Q1Q7Z7E8 422 aa18.19■□□□□ 0.5
UBXN1-217ENST00000534176 OGDHLQ9ULD0 1010 aa18.19■□□□□ 0.5
UBXN1-217ENST00000534176 ISY1Q9ULR0 285 aaKnown RBP18.19■□□□□ 0.5
UBXN1-217ENST00000534176 MCCP23508 829 aa18.18■□□□□ 0.5
UBXN1-217ENST00000534176 GPATCH4Q5T3I0 446 aaKnown RBP18.18■□□□□ 0.5
UBXN1-217ENST00000534176 COL11A1P12107 1806 aaPredicted RBP18.17■□□□□ 0.5
UBXN1-217ENST00000534176 IGHA2P01877 340 aa18.17■□□□□ 0.5
UBXN1-217ENST00000534176 NEFLP07196 543 aa18.17■□□□□ 0.5
UBXN1-217ENST00000534176 CCL14Q16627 93 aa18.17■□□□□ 0.5
UBXN1-217ENST00000534176 TBC1D10CQ8IV04 446 aa18.17■□□□□ 0.5
UBXN1-217ENST00000534176 DDX11Q96FC9 970 aa18.17■□□□□ 0.5
UBXN1-217ENST00000534176 MAML3Q96JK9 1138 aa18.17■□□□□ 0.5
UBXN1-217ENST00000534176 TMEM47Q9BQJ4 181 aa18.17■□□□□ 0.5
UBXN1-217ENST00000534176 NBPF3Q9H094 633 aa18.17■□□□□ 0.5
UBXN1-217ENST00000534176 NR2E3Q9Y5X4 410 aa18.17■□□□□ 0.5
UBXN1-217ENST00000534176 TNRC18O15417 2968 aaPredicted RBP18.16■□□□□ 0.5
UBXN1-217ENST00000534176 SGSM2O43147 1006 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 NMT2O60551 498 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 CCDC96Q2M329 555 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 BTNL9Q6UXG8 535 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 KIAA1211Q6ZU35 1233 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 ZNF467Q7Z7K2 595 aaPredicted RBP18.16■□□□□ 0.5
UBXN1-217ENST00000534176 CPXCR1Q8N123 301 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 NPLOC4Q8TAT6 608 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 ANKS1AQ92625 1134 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 MAF1Q9H063 256 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 INCENPQ9NQS7 918 aa18.16■□□□□ 0.5
UBXN1-217ENST00000534176 COBLO75128 1261 aa18.15■□□□□ 0.5
UBXN1-217ENST00000534176 TRIM32Q13049 653 aa18.15■□□□□ 0.5
UBXN1-217ENST00000534176 BMP2KLQ5H9B9 411 aa18.15■□□□□ 0.5
UBXN1-217ENST00000534176 CASC1Q6TDU7 716 aa18.15■□□□□ 0.5
UBXN1-217ENST00000534176 ANKRD35Q8N283 1001 aa18.15■□□□□ 0.5
UBXN1-217ENST00000534176 UBAC1Q9BSL1 405 aa18.15■□□□□ 0.5
UBXN1-217ENST00000534176 ACAD9Q9H845 621 aa18.15■□□□□ 0.5
UBXN1-217ENST00000534176 DDX20Q9UHI6 824 aaKnown RBP18.15■□□□□ 0.5
UBXN1-217ENST00000534176 PFASO15067 1338 aa18.15■□□□□ 0.5
UBXN1-217ENST00000534176 SEPT4O43236 478 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 KDM4AO75164 1064 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 CYBAP13498 195 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 ZNF792Q3KQV3 632 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 ARRDC4Q8NCT1 418 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 ZSCAN10Q96SZ4 725 aaPredicted RBP18.14■□□□□ 0.49
UBXN1-217ENST00000534176 TINF2Q9BSI4 451 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 KAT14Q9H8E8 782 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 RAVER2Q9HCJ3 691 aaKnown RBP18.14■□□□□ 0.49
UBXN1-217ENST00000534176 FLRT1Q9NZU1 646 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 CNPY2Q9Y2B0 182 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 TACC3Q9Y6A5 838 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 NEDD4P46934 1319 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 SYNGAP1Q96PV0 1343 aa18.14■□□□□ 0.49
UBXN1-217ENST00000534176 PDHBP11177 359 aa18.13■□□□□ 0.49
UBXN1-217ENST00000534176 CNGA1P29973 690 aa18.13■□□□□ 0.49
UBXN1-217ENST00000534176 CYP2C19P33261 490 aa18.13■□□□□ 0.49
UBXN1-217ENST00000534176 SART3Q15020 963 aaKnown RBP18.13■□□□□ 0.49
UBXN1-217ENST00000534176 LHX8Q68G74 356 aa18.13■□□□□ 0.49
UBXN1-217ENST00000534176 KCTD1Q719H9 257 aa18.13■□□□□ 0.49
UBXN1-217ENST00000534176 DPF3Q92784 378 aa18.13■□□□□ 0.49
UBXN1-217ENST00000534176 CCDC136Q96JN2 1154 aa18.13■□□□□ 0.49
UBXN1-217ENST00000534176 PRR12Q9ULL5 1215 aa18.13■□□□□ 0.49
UBXN1-217ENST00000534176 DNAJC25-GNG10A0A024R161 153 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 LOC102724159A0A0B4J2E5 919 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 ERICH2A1L162 156 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 ICAM1P05362 532 aa18.12■□□□□ 0.49
UBXN1-217ENST00000534176 CCND3P30281 292 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms