RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 ADAMTS4O75173 837 aa21.59■■□□□ 1.05
UBXN1-216ENST00000533908 PRDM1O75626 825 aa21.59■■□□□ 1.05
UBXN1-216ENST00000533908 EPHB4P54760 987 aa21.59■■□□□ 1.05
UBXN1-216ENST00000533908 SNRNP48Q6IEG0 339 aaKnown RBP21.59■■□□□ 1.05
UBXN1-216ENST00000533908 ROBO3Q96MS0 1386 aa21.59■■□□□ 1.05
UBXN1-216ENST00000533908 GPAA1O43292 621 aa21.58■■□□□ 1.05
UBXN1-216ENST00000533908 IRX5P78411 483 aaPredicted RBP21.58■■□□□ 1.05
UBXN1-216ENST00000533908 RNF180Q86T96 592 aa21.58■■□□□ 1.05
UBXN1-216ENST00000533908 CPXCR1Q8N123 301 aa21.58■■□□□ 1.05
UBXN1-216ENST00000533908 PRPF38AQ8NAV1 312 aaKnown RBP21.58■■□□□ 1.05
UBXN1-216ENST00000533908 MKL1Q969V6 931 aa21.58■■□□□ 1.05
UBXN1-216ENST00000533908 SEC62Q99442 399 aaKnown RBP21.58■■□□□ 1.05
UBXN1-216ENST00000533908 TEX13BQ9BXU2 312 aa21.58■■□□□ 1.05
UBXN1-216ENST00000533908 CUL9Q8IWT3 2517 aa21.57■■□□□ 1.04
UBXN1-216ENST00000533908 A0A1W2PQ45 241 aaPredicted RBP21.57■■□□□ 1.04
UBXN1-216ENST00000533908 A0A1W2PQY0 241 aa21.57■■□□□ 1.04
UBXN1-216ENST00000533908 ATP2A1O14983 1001 aa21.57■■□□□ 1.04
UBXN1-216ENST00000533908 AKR1A1P14550 325 aa21.57■■□□□ 1.04
UBXN1-216ENST00000533908 COPB2P35606 906 aa21.57■■□□□ 1.04
UBXN1-216ENST00000533908 SLC4A3P48751 1232 aa21.57■■□□□ 1.04
UBXN1-216ENST00000533908 MAMDC4Q6UXC1 1216 aa21.57■■□□□ 1.04
UBXN1-216ENST00000533908 RAVER2Q9HCJ3 691 aaKnown RBP21.57■■□□□ 1.04
UBXN1-216ENST00000533908 TACC3Q9Y6A5 838 aa21.57■■□□□ 1.04
UBXN1-216ENST00000533908 CCSAPQ6IQ19 270 aaPredicted RBP21.56■■□□□ 1.04
UBXN1-216ENST00000533908 KLHDC9Q8NEP7 349 aa21.56■■□□□ 1.04
UBXN1-216ENST00000533908 DDX11Q96FC9 970 aa21.56■■□□□ 1.04
UBXN1-216ENST00000533908 CEP95Q96GE4 821 aa21.56■■□□□ 1.04
UBXN1-216ENST00000533908 FGD4Q96M96 766 aa21.56■■□□□ 1.04
UBXN1-216ENST00000533908 SEMA6BQ9H3T3 888 aa21.56■■□□□ 1.04
UBXN1-216ENST00000533908 MTMR4Q9NYA4 1195 aa21.56■■□□□ 1.04
UBXN1-216ENST00000533908 MYADML2A6NDP7 307 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 PATL2C9JE40 543 aaKnown RBP21.55■■□□□ 1.04
UBXN1-216ENST00000533908 KIAA0355O15063 1070 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 ADCY6O43306 1168 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 CLTBP09497 229 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 ZNF697Q5TEC3 545 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 IFNL3Q8IZI9 196 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 ZNF444Q8N0Y2 327 aaPredicted RBP21.55■■□□□ 1.04
UBXN1-216ENST00000533908 KIFC2Q96AC6 838 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 CDX2Q99626 313 aaPredicted RBP21.55■■□□□ 1.04
UBXN1-216ENST00000533908 SLC38A10Q9HBR0 1119 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 CNPY2Q9Y2B0 182 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 SYNRGQ9UMZ2 1314 aa21.55■■□□□ 1.04
UBXN1-216ENST00000533908 PQBP1O60828 265 aaKnown RBP21.54■■□□□ 1.04
UBXN1-216ENST00000533908 ZBED4O75132 1171 aa21.54■■□□□ 1.04
UBXN1-216ENST00000533908 APPP05067 770 aa21.54■■□□□ 1.04
UBXN1-216ENST00000533908 ZFYP08048 801 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-216ENST00000533908 TDO2P48775 406 aa21.54■■□□□ 1.04
UBXN1-216ENST00000533908 ACLYP53396 1101 aa21.54■■□□□ 1.04
UBXN1-216ENST00000533908 FAAP100Q0VG06 881 aa21.54■■□□□ 1.04
UBXN1-216ENST00000533908 LRRC47Q8N1G4 583 aaKnown RBP21.54■■□□□ 1.04
UBXN1-216ENST00000533908 MSL3Q8N5Y2 521 aaKnown RBP21.54■■□□□ 1.04
UBXN1-216ENST00000533908 OTUD7AQ8TE49 926 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-216ENST00000533908 TTYH1Q9H313 450 aaPredicted RBP21.54■■□□□ 1.04
UBXN1-216ENST00000533908 FAM184BQ9ULE4 1060 aa21.54■■□□□ 1.04
UBXN1-216ENST00000533908 SYNGAP1Q96PV0 1343 aa21.54■■□□□ 1.04
UBXN1-216ENST00000533908 KCNA10Q16322 511 aa21.53■■□□□ 1.04
UBXN1-216ENST00000533908 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.53■■□□□ 1.04
UBXN1-216ENST00000533908 TSEN34Q9BSV6 310 aaKnown RBP21.53■■□□□ 1.04
UBXN1-216ENST00000533908 MYH4Q9Y623 1939 aa21.53■■□□□ 1.04
UBXN1-216ENST00000533908 GNAT2P19087 354 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 SMAD3P84022 425 aaKnown RBP21.52■■□□□ 1.04
UBXN1-216ENST00000533908 ACVR2BQ13705 512 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 ANKRD33Q7Z3H0 272 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 ZNF467Q7Z7K2 595 aaPredicted RBP21.52■■□□□ 1.04
UBXN1-216ENST00000533908 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.52■■□□□ 1.04
UBXN1-216ENST00000533908 NEDD1Q8NHV4 660 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 PI4K2BQ8TCG2 481 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 GPATCH3Q96I76 525 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 COL25A1Q9BXS0 654 aaPredicted RBP21.52■■□□□ 1.04
UBXN1-216ENST00000533908 TMEM39AQ9NV64 488 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.52■■□□□ 1.04
UBXN1-216ENST00000533908 FEM1BQ9UK73 627 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 ZHX1Q9UKY1 873 aaPredicted RBP21.52■■□□□ 1.04
UBXN1-216ENST00000533908 PCDHB15Q9Y5E8 787 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 UNC80Q8N2C7 3258 aa21.52■■□□□ 1.04
UBXN1-216ENST00000533908 RAG1P15918 1043 aa21.51■■□□□ 1.03
UBXN1-216ENST00000533908 SLFN13Q68D06 897 aa21.51■■□□□ 1.03
UBXN1-216ENST00000533908 GMCL1P1Q8NEA9 526 aa21.51■■□□□ 1.03
UBXN1-216ENST00000533908 CHMP4CQ96CF2 233 aa21.51■■□□□ 1.03
UBXN1-216ENST00000533908 TOX2Q96NM4 488 aa21.51■■□□□ 1.03
UBXN1-216ENST00000533908 FOXP2O15409 715 aa21.5■■□□□ 1.03
UBXN1-216ENST00000533908 DUSP11O75319 330 aaKnown RBP21.5■■□□□ 1.03
UBXN1-216ENST00000533908 TTLL1O95922 423 aa21.5■■□□□ 1.03
UBXN1-216ENST00000533908 TFAP4Q01664 338 aa21.5■■□□□ 1.03
UBXN1-216ENST00000533908 ANKRD35Q8N283 1001 aa21.5■■□□□ 1.03
UBXN1-216ENST00000533908 KATNBL1Q9H079 304 aa21.5■■□□□ 1.03
UBXN1-216ENST00000533908 INCENPQ9NQS7 918 aa21.5■■□□□ 1.03
UBXN1-216ENST00000533908 STARD7Q9NQZ5 370 aa21.5■■□□□ 1.03
UBXN1-216ENST00000533908 BMP3P12645 472 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 CDK7P50613 346 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 CNTN2Q02246 1040 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 CCDC144BQ3MJ40 725 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 ZMYM1Q5SVZ6 1142 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 CHST13Q8NET6 341 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 MYLIPQ8WY64 445 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 ZNF287Q9HBT7 754 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 SYNPO2Q9UMS6 1093 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 ZNF536O15090 1300 aa21.49■■□□□ 1.03
UBXN1-216ENST00000533908 PLIN4Q96Q06 1357 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms