RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 HELLSQ9NRZ9 838 aa14.74□□□□□ -0.05
CAPRIN1-213ENST00000533562 ZNFX1Q9P2E3 1918 aaKnown RBP14.74□□□□□ -0.05
CAPRIN1-213ENST00000533562 ALPK3Q96L96 1907 aa14.73□□□□□ -0.05
CAPRIN1-213ENST00000533562 KBTBD13C9JR72 458 aa14.73□□□□□ -0.05
CAPRIN1-213ENST00000533562 ATP2A1O14983 1001 aa14.73□□□□□ -0.05
CAPRIN1-213ENST00000533562 FDX1P10109 184 aa14.73□□□□□ -0.05
CAPRIN1-213ENST00000533562 BMP3P12645 472 aa14.73□□□□□ -0.05
CAPRIN1-213ENST00000533562 ZNF792Q3KQV3 632 aa14.73□□□□□ -0.05
CAPRIN1-213ENST00000533562 GJC2Q5T442 439 aaPredicted RBP14.73□□□□□ -0.05
CAPRIN1-213ENST00000533562 SLFN13Q68D06 897 aa14.73□□□□□ -0.05
CAPRIN1-213ENST00000533562 CPXCR1Q8N123 301 aa14.73□□□□□ -0.05
CAPRIN1-213ENST00000533562 GREB1LQ9C091 1923 aaPredicted RBP14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 PARP14Q460N5 1801 aa14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 TSPY2A6NKD2 308 aa14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 MYCNP04198 464 aaPredicted RBP14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 MAGEA10P43363 369 aaPredicted RBP14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 SLC4A3P48751 1232 aa14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 MCMDC2Q4G0Z9 681 aa14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 CCDC129Q6ZRS4 1044 aa14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 LRRC47Q8N1G4 583 aaKnown RBP14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 MSL3Q8N5Y2 521 aaKnown RBP14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 CHURC1Q8WUH1 139 aa14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 SLC38A10Q9HBR0 1119 aa14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 CNPY2Q9Y2B0 182 aa14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 PLIN4Q96Q06 1357 aa14.72□□□□□ -0.05
CAPRIN1-213ENST00000533562 COL11A1P12107 1806 aaPredicted RBP14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 TRIM6-TRIM34B2RNG4 842 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 RARBP10826 455 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 STAT2P52630 851 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 ATN1P54259 1190 aaPredicted RBP14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 OAZ1P54368 228 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 CTDSPL2Q05D32 466 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 ALX1Q15699 326 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 ANO1Q5XXA6 986 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 GMCL1Q96IK5 515 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 UBE2OQ9C0C9 1292 aaKnown RBP14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 LNPKQ9C0E8 428 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 PRKAG2Q9UGJ0 569 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 FBXO40Q9UH90 709 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 ANAPC4Q9UJX5 808 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 ISY1Q9ULR0 285 aaKnown RBP14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 STX8Q9UNK0 236 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 RIPK3Q9Y572 518 aa14.71□□□□□ -0.05
CAPRIN1-213ENST00000533562 SMCHD1A6NHR9 2005 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 TMEM232C9JQI7 657 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 FOXP2O15409 715 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 RANBP6O60518 1105 aaKnown RBP14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 SLC1A4P43007 532 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 IKQ13123 557 aaPredicted RBP14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 VPS53Q5VIR6 699 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 B4GALNT3Q6L9W6 998 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 FAM160B2Q86V87 743 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 SMC5Q8IY18 1101 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 ANKRD35Q8N283 1001 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 CHST13Q8NET6 341 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 STAG1Q8WVM7 1258 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 RAVER2Q9HCJ3 691 aaKnown RBP14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 MYH4Q9Y623 1939 aa14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 LAMA2P24043 3122 aaKnown RBP14.7□□□□□ -0.06
CAPRIN1-213ENST00000533562 SYNGAP1Q96PV0 1343 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 ORC4O43929 436 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 PLA2G6O60733 806 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 FGAP02671 866 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 AKR1A1P14550 325 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 MCCP23508 829 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 LRRC41Q15345 812 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 SLC39A5Q6ZMH5 540 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 RNF180Q86T96 592 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 TDHQ8IZJ6 230 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 RILPL2Q969X0 211 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 FAM227BQ96M60 508 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 LBHD1Q9BQE6 289 aaPredicted RBP14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 XPNPEP3Q9NQH7 507 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 INCENPQ9NQS7 918 aa14.69□□□□□ -0.06
CAPRIN1-213ENST00000533562 DNAJC25-GNG10A0A024R161 153 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 FGRP09769 529 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 ZNF865P0CJ78 1059 aaPredicted RBP14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 TAL1P17542 331 aaPredicted RBP14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 ADCYAP1R1P41586 468 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 MFAP1P55081 439 aaKnown RBP14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 RTP1P59025 263 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 RCSD1Q6JBY9 416 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 MAMDC4Q6UXC1 1216 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 ZNF467Q7Z7K2 595 aaPredicted RBP14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 CHD1LQ86WJ1 897 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 IL17RBQ9NRM6 502 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 TOMM22Q9NS69 142 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 FAM184BQ9ULE4 1060 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 ATP11BQ9Y2G3 1177 aa14.68□□□□□ -0.06
CAPRIN1-213ENST00000533562 FRMPD3Q5JV73 1810 aa14.67□□□□□ -0.06
CAPRIN1-213ENST00000533562 A0A0D9SFI3 127 aa14.67□□□□□ -0.06
CAPRIN1-213ENST00000533562 HSPD1P10809 573 aaKnown RBP14.67□□□□□ -0.06
CAPRIN1-213ENST00000533562 MDM2Q00987 491 aaPredicted RBP14.67□□□□□ -0.06
CAPRIN1-213ENST00000533562 NUCB1Q02818 461 aa14.67□□□□□ -0.06
CAPRIN1-213ENST00000533562 LRIT3Q3SXY7 679 aa14.67□□□□□ -0.06
CAPRIN1-213ENST00000533562 GPR153Q6NV75 609 aa14.67□□□□□ -0.06
CAPRIN1-213ENST00000533562 SOX1O00570 391 aaPredicted RBP14.66□□□□□ -0.06
CAPRIN1-213ENST00000533562 NMT2O60551 498 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms