RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 STX8Q9UNK0 236 aa15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 RBM8AQ9Y5S9 174 aaKnown RBP15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 TNRC18O15417 2968 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 BRCA2P51587 3418 aa15.25■□□□□ 0.03
TRAPPC4-212ENST00000533058 BMP3P12645 472 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 ADORA2AP29274 412 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 OAZ1P54368 228 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 TRIM32Q13049 653 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 PLS1Q14651 629 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 CCL14Q16627 93 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 OLFML2BQ68BL8 750 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 NCAPG2Q86XI2 1143 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 LRRC47Q8N1G4 583 aaKnown RBP15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 ANKLE1Q8NAG6 615 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 MAP4K1Q92918 833 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 DEFB118Q96PH6 123 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 TEX13BQ9BXU2 312 aa15.24■□□□□ 0.03
TRAPPC4-212ENST00000533058 ZBED4O75132 1171 aa15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 FCER1AP12319 257 aa15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 PRKAR2AP13861 404 aaKnown RBP15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 SLC1A4P43007 532 aa15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 CACNB2Q08289 660 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 PRPF38BQ5VTL8 546 aaKnown RBP15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 MFSD14CQ5VZR4 134 aa15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 RCSD1Q6JBY9 416 aa15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 DPP9Q86TI2 863 aa15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 FAM160B2Q86V87 743 aa15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 CHURC1Q8WUH1 139 aa15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 SLC38A10Q9HBR0 1119 aa15.23■□□□□ 0.03
TRAPPC4-212ENST00000533058 PARP14Q460N5 1801 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 NMT2O60551 498 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 TFRCP02786 760 aaKnown RBP15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 TOP1P11387 765 aaKnown RBP15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 STAT2P52630 851 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 CCDC178Q5BJE1 867 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 TBC1D10CQ8IV04 446 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 NPLOC4Q8TAT6 608 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 ESR2Q92731 530 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 FLRT1Q9NZU1 646 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 OGDHLQ9ULD0 1010 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 DIS3Q9Y2L1 958 aaKnown RBP15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 ZNF236Q9UL36 1845 aa15.22■□□□□ 0.03
TRAPPC4-212ENST00000533058 TMEM232C9JQI7 657 aa15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 COBLO75128 1261 aa15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 MCCP23508 829 aa15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 TRDNQ13061 729 aa15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 KCTD2Q14681 263 aa15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 RNF20Q5VTR2 975 aa15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 DGKHQ86XP1 1220 aa15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 DCAF4Q8WV16 495 aa15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 TMEM47Q9BQJ4 181 aa15.21■□□□□ 0.03
TRAPPC4-212ENST00000533058 FARP2O94887 1054 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC4-212ENST00000533058 CYP21A2P08686 494 aa15.2■□□□□ 0.02
TRAPPC4-212ENST00000533058 CREB3L3Q68CJ9 461 aa15.2■□□□□ 0.02
TRAPPC4-212ENST00000533058 SNRNP48Q6IEG0 339 aaKnown RBP15.2■□□□□ 0.02
TRAPPC4-212ENST00000533058 ANKS1AQ92625 1134 aa15.2■□□□□ 0.02
TRAPPC4-212ENST00000533058 KIFC2Q96AC6 838 aa15.2■□□□□ 0.02
TRAPPC4-212ENST00000533058 MMP19Q99542 508 aa15.2■□□□□ 0.02
TRAPPC4-212ENST00000533058 FBXO40Q9UH90 709 aa15.2■□□□□ 0.02
TRAPPC4-212ENST00000533058 MKI67P46013 3256 aaKnown RBP15.2■□□□□ 0.02
TRAPPC4-212ENST00000533058 MYH4Q9Y623 1939 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 SLC27A2O14975 620 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 MSCO60682 206 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 ZNF792Q3KQV3 632 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 LHX8Q68G74 356 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 BTNL9Q6UXG8 535 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 RALYLQ86SE5 291 aaKnown RBP15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 CHST13Q8NET6 341 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 MAML3Q96JK9 1138 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 HTATIP2Q9BUP3 242 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 KRT23Q9C075 422 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 CNNM2Q9H8M5 875 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 NRBP1Q9UHY1 535 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 RIPK3Q9Y572 518 aa15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 CTDP1Q9Y5B0 961 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC4-212ENST00000533058 NEDD4P46934 1319 aa15.18■□□□□ 0.02
TRAPPC4-212ENST00000533058 SNHG28P0DPA3 235 aa15.18■□□□□ 0.02
TRAPPC4-212ENST00000533058 CYBAP13498 195 aa15.18■□□□□ 0.02
TRAPPC4-212ENST00000533058 CCND3P30281 292 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC4-212ENST00000533058 CYP2C19P33261 490 aa15.18■□□□□ 0.02
TRAPPC4-212ENST00000533058 IQCA1Q86XH1 822 aa15.18■□□□□ 0.02
TRAPPC4-212ENST00000533058 MSL3Q8N5Y2 521 aaKnown RBP15.18■□□□□ 0.02
TRAPPC4-212ENST00000533058 DNAJC25-GNG10A0A024R161 153 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 B4E1Z4 1266 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 E7EWF7 191 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 KDM4AO75164 1064 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 MNX1P50219 401 aaPredicted RBP15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 NECTIN1Q15223 517 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 TKFCQ3LXA3 575 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 KCTD1Q719H9 257 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 NECAB2Q7Z6G3 386 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 CPXCR1Q8N123 301 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 RAVER2Q9HCJ3 691 aaKnown RBP15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 PRR12Q9ULL5 1215 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 ZNF536O15090 1300 aa15.17■□□□□ 0.02
TRAPPC4-212ENST00000533058 PDHBP11177 359 aa15.16■□□□□ 0.02
TRAPPC4-212ENST00000533058 IKQ13123 557 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms