RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 FESP07332 822 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 ERCC5P28715 1186 aaPredicted RBP15.74■□□□□ 0.11
PCF11-204ENST00000530660 PAPOLAP51003 745 aaKnown RBP15.74■□□□□ 0.11
PCF11-204ENST00000530660 HAUS3Q68CZ6 603 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 USP49Q70CQ1 688 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 CACNA2D3Q8IZS8 1091 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 PAIP2Q9BPZ3 127 aaKnown RBP15.74■□□□□ 0.11
PCF11-204ENST00000530660 PANK4Q9NVE7 773 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 TAB2Q9NYJ8 693 aa15.74■□□□□ 0.11
PCF11-204ENST00000530660 HOXB7P09629 217 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 GNAT1P11488 350 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 RANBP1P43487 201 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 KRT31Q15323 416 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 EPHA10Q5JZY3 1008 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 CCT6BQ92526 530 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 CAVIN3Q969G5 261 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 PAPOLBQ9NRJ5 636 aaKnown RBP15.73■□□□□ 0.11
PCF11-204ENST00000530660 NWD1Q149M9 1564 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 AFMP43652 599 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 HAND2P61296 217 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 IQCEQ6IPM2 695 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 TBC1D1Q86TI0 1168 aaPredicted RBP15.73■□□□□ 0.11
PCF11-204ENST00000530660 C14orf37Q86TY3 774 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 CTAGE1Q96RT6 745 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 NCAPD2Q15021 1401 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 SPDYE3A6NKU9 549 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 PHF20L1A8MW92 1017 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 NEFHP12036 1026 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 ABL2P42684 1182 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 CWF19L1Q69YN2 538 aaKnown RBP15.73■□□□□ 0.11
PCF11-204ENST00000530660 MAATS1Q7Z4T9 603 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 EPAS1Q99814 870 aa15.73■□□□□ 0.11
PCF11-204ENST00000530660 RICTORQ6R327 1708 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.72■□□□□ 0.11
PCF11-204ENST00000530660 AHCYL1O43865 530 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 DNAJC8O75937 253 aaPredicted RBP15.72■□□□□ 0.11
PCF11-204ENST00000530660 RXRAP19793 462 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 TFCP2Q12800 502 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 LACTB2Q53H82 288 aaPredicted RBP15.72■□□□□ 0.11
PCF11-204ENST00000530660 EMC10Q5UCC4 262 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 KRT40Q6A162 431 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 MPRIPQ6WCQ1 1025 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 KRI1Q8N9T8 703 aaKnown RBP15.72■□□□□ 0.11
PCF11-204ENST00000530660 B4GALNT2Q8NHY0 566 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 ANKRD24Q8TF21 1146 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 ALG1Q9BT22 464 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 TTC26A0AVF1 554 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 PYGBP11216 843 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 CYP27A1Q02318 531 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 LINS1Q8NG48 757 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 ITIH6Q6UXX5 1313 aa15.72■□□□□ 0.11
PCF11-204ENST00000530660 UBE2Q2LH0YL09 131 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 MAP3K13O43283 966 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 TRAPPC3O43617 180 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 DPYDQ12882 1025 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 CUL4BQ13620 913 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 DBNDD2Q9BQY9 259 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 TSGA10Q9BZW7 698 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 PIDD1Q9HB75 910 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 PPIP5K2O43314 1243 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 KRT86O43790 486 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 GLI1P08151 1106 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 FAM163BP0C2L3 166 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 PPP4R3AQ6IN85 833 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 NOC3LQ8WTT2 800 aaKnown RBP15.71■□□□□ 0.11
PCF11-204ENST00000530660 PICK1Q9NRD5 415 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 SLC5A4Q9NY91 659 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 MYH13Q9UKX3 1938 aa15.71■□□□□ 0.11
PCF11-204ENST00000530660 COQ9O75208 318 aa15.71■□□□□ 0.1
PCF11-204ENST00000530660 VAV2P52735 878 aa15.71■□□□□ 0.1
PCF11-204ENST00000530660 BLMHQ13867 455 aa15.71■□□□□ 0.1
PCF11-204ENST00000530660 TRADDQ15628 312 aa15.71■□□□□ 0.1
PCF11-204ENST00000530660 TNNI3KQ59H18 835 aa15.71■□□□□ 0.1
PCF11-204ENST00000530660 OR2W6PQ8NHA6 318 aa15.71■□□□□ 0.1
PCF11-204ENST00000530660 L3MBTL3Q96JM7 780 aaPredicted RBP15.71■□□□□ 0.1
PCF11-204ENST00000530660 TSC22D3Q99576 134 aa15.71■□□□□ 0.1
PCF11-204ENST00000530660 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.71■□□□□ 0.1
PCF11-204ENST00000530660 FPGT-TNNI3KV9GXZ4 949 aa15.71■□□□□ 0.1
PCF11-204ENST00000530660 SMIM24O75264 130 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 ATP4AP20648 1035 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 CTCFP49711 727 aaPredicted RBP15.7■□□□□ 0.1
PCF11-204ENST00000530660 GLE1Q53GS7 698 aaKnown RBP15.7■□□□□ 0.1
PCF11-204ENST00000530660 NFRKBQ6P4R8 1299 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 SPICE1Q8N0Z3 855 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 PHKBQ93100 1093 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 OSBPL9Q96SU4 736 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.7■□□□□ 0.14e-18■□□□□ 11.2
PCF11-204ENST00000530660 TOPAZ1Q8N9V7 1692 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 OVOS2A0A0G2JMS6 1433 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 WDR59Q6PJI9 974 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 CRELD2Q6UXH1 353 aaPredicted RBP15.7■□□□□ 0.1
PCF11-204ENST00000530660 CCDC63Q8NA47 563 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 NOP53Q9NZM5 478 aaKnown RBP15.7■□□□□ 0.1
PCF11-204ENST00000530660 SNX12Q9UMY4 172 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 IGKV5-2P06315 115 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 C8orf74Q6P047 294 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 TRIML1Q8N9V2 468 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 CTNND2Q9UQB3 1225 aa15.7■□□□□ 0.1
PCF11-204ENST00000530660 HSPD1P10809 573 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms