RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHD7-208ENST00000528280 GMCL1Q96IK5 515 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 FAM227BQ96M60 508 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 TTC14Q96N46 770 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 TEX13BQ9BXU2 312 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 NBPF3Q9H094 633 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 TCP11L1Q9NUJ3 509 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 CTNNA3Q9UI47 895 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 OGDHLQ9ULD0 1010 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHD7-208ENST00000528280 PLIN4Q96Q06 1357 aa11.36□□□□□ -0.59
CHD7-208ENST00000528280 CCDC171Q6TFL3 1326 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 CTDSPL2Q05D32 466 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 VPS53Q5VIR6 699 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 RCSD1Q6JBY9 416 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 MFSD6Q6ZSS7 791 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 Q7L0L9 218 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 RUFY2Q8WXA3 655 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 MMP19Q99542 508 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 TOMM22Q9NS69 142 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 FBXO28Q9NVF7 368 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 FBXO40Q9UH90 709 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 NRBP1Q9UHY1 535 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 STX8Q9UNK0 236 aa11.35□□□□□ -0.59
CHD7-208ENST00000528280 VCANP13611 3396 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 A0A0D9SFI3 127 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 FOXP2O15409 715 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 EVI5O60447 810 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 BMP8BP34820 402 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 SLC1A4P43007 532 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 STAT2P52630 851 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 TRIM32Q13049 653 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 CCL14Q16627 93 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 AKNAD1Q5T1N1 836 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 CWC27Q6UX04 472 aaKnown RBP11.34□□□□□ -0.59
CHD7-208ENST00000528280 MSL3Q8N5Y2 521 aaKnown RBP11.34□□□□□ -0.59
CHD7-208ENST00000528280 STAG1Q8WVM7 1258 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 KIFC2Q96AC6 838 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 DDX11Q96FC9 970 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 PAWRQ96IZ0 340 aaKnown RBP11.34□□□□□ -0.59
CHD7-208ENST00000528280 PNMA2Q9UL42 364 aa11.34□□□□□ -0.59
CHD7-208ENST00000528280 ZNF214Q9UL59 606 aaPredicted RBP11.34□□□□□ -0.59
CHD7-208ENST00000528280 TOP1P11387 765 aaKnown RBP11.33□□□□□ -0.6
CHD7-208ENST00000528280 CNGA1P29973 690 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 NOVP48745 357 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 IKQ13123 557 aaPredicted RBP11.33□□□□□ -0.6
CHD7-208ENST00000528280 ARRDC4Q8NCT1 418 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 CHST13Q8NET6 341 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 NPLOC4Q8TAT6 608 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 DCAF4Q8WV16 495 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 ESR2Q92731 530 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 NUP88Q99567 741 aaPredicted RBP11.33□□□□□ -0.6
CHD7-208ENST00000528280 GDF15Q99988 308 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 DSCC1Q9BVC3 393 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 C11orf49Q9H6J7 331 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 SLC38A10Q9HBR0 1119 aa11.33□□□□□ -0.6
CHD7-208ENST00000528280 SPTBN5Q9NRC6 3674 aaKnown RBP11.32□□□□□ -0.6
CHD7-208ENST00000528280 TMEM232C9JQI7 657 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 COBLO75128 1261 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 IGHA2P01877 340 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 MCCP23508 829 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 CCND3P30281 292 aaPredicted RBP11.32□□□□□ -0.6
CHD7-208ENST00000528280 IMMTQ16891 758 aaKnown RBP11.32□□□□□ -0.6
CHD7-208ENST00000528280 TKFCQ3LXA3 575 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 LRIT3Q3SXY7 679 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 RRP12Q5JTH9 1297 aaKnown RBP11.32□□□□□ -0.6
CHD7-208ENST00000528280 LHX8Q68G74 356 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 SNRNP48Q6IEG0 339 aaKnown RBP11.32□□□□□ -0.6
CHD7-208ENST00000528280 CPXCR1Q8N123 301 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 LRRC47Q8N1G4 583 aaKnown RBP11.32□□□□□ -0.6
CHD7-208ENST00000528280 REPS2Q8NFH8 660 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 MAML3Q96JK9 1138 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 IL17RBQ9NRM6 502 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 FLRT1Q9NZU1 646 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 DDX20Q9UHI6 824 aaKnown RBP11.32□□□□□ -0.6
CHD7-208ENST00000528280 ISY1Q9ULR0 285 aaKnown RBP11.32□□□□□ -0.6
CHD7-208ENST00000528280 PLXNB2O15031 1838 aa11.32□□□□□ -0.6
CHD7-208ENST00000528280 RLFQ13129 1914 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 GREB1LQ9C091 1923 aaPredicted RBP11.31□□□□□ -0.6
CHD7-208ENST00000528280 SEPT4O43236 478 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 CYP2C19P33261 490 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 ZNF792Q3KQV3 632 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 TTC22Q5TAA0 569 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHD7-208ENST00000528280 ZNF467Q7Z7K2 595 aaPredicted RBP11.31□□□□□ -0.6
CHD7-208ENST00000528280 ZNF589Q86UQ0 364 aaPredicted RBP11.31□□□□□ -0.6
CHD7-208ENST00000528280 IQCA1Q86XH1 822 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 DGKHQ86XP1 1220 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 TINF2Q9BSI4 451 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 KRT23Q9C075 422 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 CNNM2Q9H8M5 875 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 INCENPQ9NQS7 918 aa11.31□□□□□ -0.6
CHD7-208ENST00000528280 CYBAP13498 195 aa11.3□□□□□ -0.6
CHD7-208ENST00000528280 HAND2P61296 217 aa11.3□□□□□ -0.6
CHD7-208ENST00000528280 RAVER2Q9HCJ3 691 aaKnown RBP11.3□□□□□ -0.6
CHD7-208ENST00000528280 CNPY2Q9Y2B0 182 aa11.3□□□□□ -0.6
CHD7-208ENST00000528280 DNM1LO00429 736 aa11.29□□□□□ -0.6
CHD7-208ENST00000528280 COL9A1P20849 921 aa11.29□□□□□ -0.6
CHD7-208ENST00000528280 SLC4A3P48751 1232 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms