RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 APOBRQ0VD83 1088 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 WTAPQ15007 396 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 FAM47AQ5JRC9 791 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 PRPF38BQ5VTL8 546 aaKnown RBP14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 LBX2Q6XYB7 198 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 NFXL1Q6ZNB6 911 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 GTF3C2Q8WUA4 911 aaPredicted RBP14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 ZNF274Q96GC6 653 aaPredicted RBP14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 ZSCAN10Q96SZ4 725 aaPredicted RBP14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 RNF208Q9H0X6 261 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 PORCNQ9H237 461 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 TPCN1Q9ULQ1 816 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 NAP1L2Q9ULW6 460 aaPredicted RBP14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 RABGAP1Q9Y3P9 1069 aa14.82□□□□□ -0.04
SSSCA1-203ENST00000526877 CEP290O15078 2479 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 CCDC69A6NI79 296 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 CUL4AQ13619 759 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 SYNE3Q6ZMZ3 975 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 UBE2Q1Q7Z7E8 422 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 CLEC10AQ8IUN9 316 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 SPRYD3Q8NCJ5 442 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 NKX2-3Q8TAU0 364 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 USP6NLQ92738 828 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 ZKSCAN3Q9BRR0 538 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 RPAP3Q9H6T3 665 aaPredicted RBP14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 TCP11L1Q9NUJ3 509 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 BTBD7Q9P203 1132 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 TMX2Q9Y320 296 aa14.81□□□□□ -0.04
SSSCA1-203ENST00000526877 GREB1LQ9C091 1923 aaPredicted RBP14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 KLF18A0A0U1RQI7 1052 aa14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 SPDYE16A6NNV3 312 aaPredicted RBP14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 MAPK4P31152 587 aa14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 EVCP57679 992 aa14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 ME3Q16798 604 aa14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 NEDD1Q8NHV4 660 aa14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 INTS4Q96HW7 963 aaKnown RBP14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 PAGR1Q9BTK6 254 aa14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 SLKQ9H2G2 1235 aaPredicted RBP14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 LY9Q9HBG7 655 aa14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 GPHNQ9NQX3 736 aaPredicted RBP14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 TNKSO95271 1327 aa14.8□□□□□ -0.04
SSSCA1-203ENST00000526877 SGPL1O95470 568 aa14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 XRCC5P13010 732 aaKnown RBP14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 COG2Q14746 738 aa14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 PPP4R3BQ5MIZ7 849 aa14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 MORN1Q5T089 497 aa14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 IFIT1BQ5T764 474 aaKnown RBP14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 GPR142Q7Z601 462 aa14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 SGMS1Q86VZ5 419 aa14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 U2AF1L4Q8WU68 220 aaKnown RBP14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 PAK6Q9NQU5 681 aaPredicted RBP14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 SLC12A7Q9Y666 1083 aa14.79□□□□□ -0.04
SSSCA1-203ENST00000526877 PFKFB2O60825 505 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 LARGE1O95461 756 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 HMGCRP04035 888 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 EEF2P13639 858 aaKnown RBP14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 CYP2B6P20813 491 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 PDIA3P30101 505 aaKnown RBP14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 ICA1Q05084 483 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 TRIM32Q13049 653 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 STK3Q13188 491 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 SEC23AQ15436 765 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 PLEKHH3Q7Z736 793 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 DGKHQ86XP1 1220 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 CCDC83Q8IWF9 413 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 ENAHQ8N8S7 591 aaPredicted RBP14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 TRIB2Q92519 343 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 LPAR1Q92633 364 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 NUDT12Q9BQG2 462 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 VCPKMTQ9H867 229 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 KANSL2Q9H9L4 492 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 ARHGEF10LQ9HCE6 1279 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 FOXD4L1Q9NU39 408 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 HOXC10Q9NYD6 342 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 BRPF3Q9ULD4 1205 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 PARP14Q460N5 1801 aa14.78□□□□□ -0.04
SSSCA1-203ENST00000526877 GOLGA8BA8MQT2 603 aa14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 ZBTB43O43298 467 aa14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 DHX16O60231 1041 aaKnown RBP14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 MAP3K21Q5TCX8 1036 aa14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 CATIPQ7Z7H3 387 aa14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 NECAB1Q8N987 351 aa14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 ANKS1AQ92625 1134 aa14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 GTF3C6Q969F1 213 aa14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 CRISPLD2Q9H0B8 497 aa14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 CWC22Q9HCG8 908 aaKnown RBP14.77□□□□□ -0.05
SSSCA1-203ENST00000526877 PLIN4Q96Q06 1357 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 RPTORQ8N122 1335 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 A0A0G2JMZ2 1700 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 NMT2O60551 498 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 CALM1P0DP23 149 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 CALM2P0DP24 149 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 CALM3P0DP25 149 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 DSG3P32926 999 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 RCAN1P53805 252 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 CCNA1P78396 465 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 APOA5Q6Q788 366 aa14.76□□□□□ -0.05
SSSCA1-203ENST00000526877 SPICE1Q8N0Z3 855 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms