RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 PARP14Q460N5 1801 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 PRDM1O75626 825 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 TSPY3P0CV98 308 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 TSPY8P0CW00 308 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 ATN1P54259 1190 aaPredicted RBP13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 OAZ1P54368 228 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 LRRC41Q15345 812 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 C1orf53Q5VUE5 145 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 SNRNP48Q6IEG0 339 aaKnown RBP13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 CEP95Q96GE4 821 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 LRCH3Q96II8 777 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 SEC62Q99442 399 aaKnown RBP13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 NUP88Q99567 741 aaPredicted RBP13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 PLIN4Q96Q06 1357 aa13.2□□□□□ -0.3
AMBRA1-204ENST00000526545 RARBP10826 455 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 RTP1P59025 263 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 TFAP4Q01664 338 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 PPARAQ07869 468 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 SNX17Q15036 470 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 ZNF467Q7Z7K2 595 aaPredicted RBP13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 RNF180Q86T96 592 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 OTUD7AQ8TE49 926 aaPredicted RBP13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 KIFC2Q96AC6 838 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 EVI5LQ96CN4 794 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 DDX11Q96FC9 970 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 SLC38A10Q9HBR0 1119 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 XPNPEP3Q9NQH7 507 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 FBXO40Q9UH90 709 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 CNPY2Q9Y2B0 182 aa13.19□□□□□ -0.3
AMBRA1-204ENST00000526545 SYNGAP1Q96PV0 1343 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 SALL3Q9BXA9 1300 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 DNAJC25-GNG10A0A024R161 153 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 BMP3P12645 472 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 AKR1A1P14550 325 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 ADCYAP1R1P41586 468 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 MDM2Q00987 491 aaPredicted RBP13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 NUCB1Q02818 461 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 ERICH6BQ5W0A0 696 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 ANO1Q5XXA6 986 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 B4GALNT3Q6L9W6 998 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 MAMDC4Q6UXC1 1216 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 CHURC1Q8WUH1 139 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 GMCL1Q96IK5 515 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 PHF24Q9UPV7 400 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 ATP11BQ9Y2G3 1177 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 RIPK3Q9Y572 518 aa13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 COL11A1P12107 1806 aaPredicted RBP13.18□□□□□ -0.3
AMBRA1-204ENST00000526545 ZNF865P0CJ78 1059 aaPredicted RBP13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 FAM47AQ5JRC9 791 aa13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 SLFN13Q68D06 897 aa13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 FAM160B2Q86V87 743 aa13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 CHD1LQ86WJ1 897 aa13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 CPXCR1Q8N123 301 aa13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 TSEN34Q9BSV6 310 aaKnown RBP13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 HELLSQ9NRZ9 838 aa13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 ANAPC4Q9UJX5 808 aa13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 FAM184BQ9ULE4 1060 aa13.17□□□□□ -0.3
AMBRA1-204ENST00000526545 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
AMBRA1-204ENST00000526545 PLA2G6O60733 806 aa13.16□□□□□ -0.3
AMBRA1-204ENST00000526545 TAL1P17542 331 aaPredicted RBP13.16□□□□□ -0.3
AMBRA1-204ENST00000526545 STAT2P52630 851 aa13.16□□□□□ -0.3
AMBRA1-204ENST00000526545 ALX1Q15699 326 aa13.16□□□□□ -0.3
AMBRA1-204ENST00000526545 ANKRD35Q8N283 1001 aa13.16□□□□□ -0.3
AMBRA1-204ENST00000526545 DEFB123Q8N688 67 aa13.16□□□□□ -0.3
AMBRA1-204ENST00000526545 RAVER2Q9HCJ3 691 aaKnown RBP13.16□□□□□ -0.3
AMBRA1-204ENST00000526545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.16□□□□□ -0.3
AMBRA1-204ENST00000526545 ZNFX1Q9P2E3 1918 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 TMEM232C9JQI7 657 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 SNAI1O95863 264 aaPredicted RBP13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 PGK1P00558 417 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 SLC1A4P43007 532 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 SLC4A3P48751 1232 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 PDE1AP54750 535 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 TRIM60Q495X7 471 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 LRRC47Q8N1G4 583 aaKnown RBP13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 NUP133Q8WUM0 1156 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 STAG1Q8WVM7 1258 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 FERMT2Q96AC1 680 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 LNPKQ9C0E8 428 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 ABHD16BQ9H3Z7 469 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 TACC3Q9Y6A5 838 aa13.15□□□□□ -0.3
AMBRA1-204ENST00000526545 FOXP2O15409 715 aa13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 ORC4O43929 436 aa13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 DUSP11O75319 330 aaKnown RBP13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 NOVP48745 357 aa13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 IKQ13123 557 aaPredicted RBP13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 TKFCQ3LXA3 575 aa13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 MCMDC2Q4G0Z9 681 aa13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 FAM109BQ6ICB4 259 aaPredicted RBP13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 STX8Q9UNK0 236 aa13.14□□□□□ -0.31
AMBRA1-204ENST00000526545 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 COL6A3P12111 3177 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 PLXNA1Q9UIW2 1896 aa13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 A0A1W2PQ45 241 aaPredicted RBP13.13□□□□□ -0.31
AMBRA1-204ENST00000526545 A0A1W2PQY0 241 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms