RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 ZKSCAN1P17029 563 aaPredicted RBP10.43□□□□□ -0.74
PABPC1-213ENST00000519848 TAL1P17542 331 aaPredicted RBP10.43□□□□□ -0.74
PABPC1-213ENST00000519848 MAPK4P31152 587 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 ICA1Q05084 483 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 CCDC129Q6ZRS4 1044 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 SOCS4Q8WXH5 440 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 FGD4Q96M96 766 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 GDF15Q99988 308 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 TMX2Q9Y320 296 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 SLC4A4Q9Y6R1 1079 aa10.43□□□□□ -0.74
PABPC1-213ENST00000519848 SMCHD1A6NHR9 2005 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 ERCC3P19447 782 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 TMEM132BQ14DG7 1078 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 LAPTM4AQ15012 233 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 PRAMEF19Q5SWL8 479 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 TMEM179Q6ZVK1 233 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 KBTBD3Q8NAB2 608 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 CRBNQ96SW2 442 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 TANGO6Q9C0B7 1094 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 NBPF3Q9H094 633 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 VCPKMTQ9H867 229 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 HMX1Q9NP08 348 aaPredicted RBP10.42□□□□□ -0.74
PABPC1-213ENST00000519848 INCENPQ9NQS7 918 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 ECHDC1Q9NTX5 307 aa10.42□□□□□ -0.74
PABPC1-213ENST00000519848 ZNF214Q9UL59 606 aaPredicted RBP10.42□□□□□ -0.74
PABPC1-213ENST00000519848 DDX49Q9Y6V7 483 aaKnown RBP10.42□□□□□ -0.74
PABPC1-213ENST00000519848 ADCY6O43306 1168 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 PRDM1O75626 825 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 HOXC6P09630 235 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 PTGS1P23219 599 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 ADORA2AP29274 412 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 RGS2P41220 211 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 RRP1P56182 461 aaKnown RBP10.41□□□□□ -0.74
PABPC1-213ENST00000519848 FAM83BQ5T0W9 1011 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 CERS3Q8IU89 383 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 GCC1Q96CN9 775 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 SPATC1LQ9H0A9 340 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 C11orf49Q9H6J7 331 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 ATP8A2Q9NTI2 1148 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 ADAMTS5Q9UNA0 930 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 RIPK3Q9Y572 518 aa10.41□□□□□ -0.74
PABPC1-213ENST00000519848 COL6A3P12111 3177 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 SLC15A5A6NIM6 579 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 GPAA1O43292 621 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 EVI5O60447 810 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 PGK2P07205 417 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 MAGEA10P43363 369 aaPredicted RBP10.4□□□□□ -0.74
PABPC1-213ENST00000519848 USP14P54578 494 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 VPS53Q5VIR6 699 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 TMED8Q6PL24 325 aaPredicted RBP10.4□□□□□ -0.74
PABPC1-213ENST00000519848 APPBP2Q92624 585 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 HTATIP2Q9BUP3 242 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 CABP5Q9NP86 173 aa10.4□□□□□ -0.74
PABPC1-213ENST00000519848 FLOT1O75955 427 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 MS4A1P11836 297 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 COG2Q14746 738 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 SBK1Q52WX2 424 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 FAM47AQ5JRC9 791 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 NECAB2Q7Z6G3 386 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 LRRC47Q8N1G4 583 aaKnown RBP10.39□□□□□ -0.75
PABPC1-213ENST00000519848 ANKLE1Q8NAG6 615 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 SWAP70Q9UH65 585 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 LAMA4Q16363 1823 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 PLIN4Q96Q06 1357 aa10.39□□□□□ -0.75
PABPC1-213ENST00000519848 ASTN1O14525 1302 aa10.38□□□□□ -0.75
PABPC1-213ENST00000519848 RNF113AO15541 343 aaKnown RBP10.38□□□□□ -0.75
PABPC1-213ENST00000519848 NMT2O60551 498 aa10.38□□□□□ -0.75
PABPC1-213ENST00000519848 GFRA3O60609 400 aa10.38□□□□□ -0.75
PABPC1-213ENST00000519848 NDUFB10O96000 172 aa10.38□□□□□ -0.75
PABPC1-213ENST00000519848 ZMYM1Q5SVZ6 1142 aa10.38□□□□□ -0.75
PABPC1-213ENST00000519848 GJC2Q5T442 439 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-213ENST00000519848 Q7L0L9 218 aa10.38□□□□□ -0.75
PABPC1-213ENST00000519848 GTF3C2Q8WUA4 911 aaPredicted RBP10.38□□□□□ -0.75
PABPC1-213ENST00000519848 CHMP4CQ96CF2 233 aa10.38□□□□□ -0.75
PABPC1-213ENST00000519848 CEP95Q96GE4 821 aa10.38□□□□□ -0.75
PABPC1-213ENST00000519848 MAML3Q96JK9 1138 aa10.38□□□□□ -0.75
PABPC1-213ENST00000519848 DDX20Q9UHI6 824 aaKnown RBP10.38□□□□□ -0.75
PABPC1-213ENST00000519848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
PABPC1-213ENST00000519848 LAMA2P24043 3122 aaKnown RBP10.38□□□□□ -0.75
PABPC1-213ENST00000519848 MYADML2A6NDP7 307 aa10.37□□□□□ -0.75
PABPC1-213ENST00000519848 MINDY4BA8MYZ0 360 aa10.37□□□□□ -0.75
PABPC1-213ENST00000519848 VWA5AO00534 786 aa10.37□□□□□ -0.75
PABPC1-213ENST00000519848 WDR46O15213 610 aaKnown RBP10.37□□□□□ -0.75
PABPC1-213ENST00000519848 ATP2B2Q01814 1243 aa10.37□□□□□ -0.75
PABPC1-213ENST00000519848 PLS1Q14651 629 aa10.37□□□□□ -0.75
PABPC1-213ENST00000519848 SHCBP1Q8NEM2 672 aa10.37□□□□□ -0.75
PABPC1-213ENST00000519848 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.37□□□□□ -0.75
PABPC1-213ENST00000519848 ARPP21Q9UBL0 812 aaPredicted RBP10.37□□□□□ -0.75
PABPC1-213ENST00000519848 PPP1R9AQ9ULJ8 1098 aa10.37□□□□□ -0.75
PABPC1-213ENST00000519848 EYSQ5T1H1 3165 aa10.36□□□□□ -0.75
PABPC1-213ENST00000519848 A0A0D9SFI3 127 aa10.36□□□□□ -0.75
PABPC1-213ENST00000519848 ITGB8P26012 769 aa10.36□□□□□ -0.75
PABPC1-213ENST00000519848 SNAP25P60880 206 aa10.36□□□□□ -0.75
PABPC1-213ENST00000519848 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
PABPC1-213ENST00000519848 ZNF792Q3KQV3 632 aa10.36□□□□□ -0.75
PABPC1-213ENST00000519848 OLFML2BQ68BL8 750 aa10.36□□□□□ -0.75
PABPC1-213ENST00000519848 SH3RF1Q7Z6J0 888 aa10.36□□□□□ -0.75
PABPC1-213ENST00000519848 ZNF589Q86UQ0 364 aaPredicted RBP10.36□□□□□ -0.75
PABPC1-213ENST00000519848 NCAPG2Q86XI2 1143 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms