RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 PTH1RQ03431 593 aa15.47■□□□□ 0.07
TCOF1-209ENST00000506630 COG2Q14746 738 aa15.47■□□□□ 0.07
TCOF1-209ENST00000506630 MKL1Q969V6 931 aa15.47■□□□□ 0.07
TCOF1-209ENST00000506630 IL17RBQ9NRM6 502 aa15.47■□□□□ 0.07
TCOF1-209ENST00000506630 ISY1Q9ULR0 285 aaKnown RBP15.47■□□□□ 0.07
TCOF1-209ENST00000506630 PLXNA1Q9UIW2 1896 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 CUL9Q8IWT3 2517 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 F5H6K3 240 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 COL6A1P12109 1028 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 DSG3P32926 999 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 RGS2P41220 211 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 KLRC3Q07444 240 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 CACNB2Q08289 660 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-209ENST00000506630 LBX2Q6XYB7 198 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 ESR2Q92731 530 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 NUP88Q99567 741 aaPredicted RBP15.46■□□□□ 0.07
TCOF1-209ENST00000506630 ESYT1Q9BSJ8 1104 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 CWC22Q9HCG8 908 aaKnown RBP15.46■□□□□ 0.07
TCOF1-209ENST00000506630 HOXC10Q9NYD6 342 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 SYNPO2Q9UMS6 1093 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 RABGAP1Q9Y3P9 1069 aa15.46■□□□□ 0.07
TCOF1-209ENST00000506630 MDM2Q00987 491 aaPredicted RBP15.45■□□□□ 0.06
TCOF1-209ENST00000506630 SLFN13Q68D06 897 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 CASC1Q6TDU7 716 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 KIAA1211Q6ZU35 1233 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 GMCL1P1Q8NEA9 526 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 CHMP4CQ96CF2 233 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 ATG4CQ96DT6 458 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 LBHD1Q9BQE6 289 aaPredicted RBP15.45■□□□□ 0.06
TCOF1-209ENST00000506630 FBXO28Q9NVF7 368 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 BTBD7Q9P203 1132 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 MTMR7Q9Y216 660 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
TCOF1-209ENST00000506630 LAMA3Q16787 3333 aa15.45■□□□□ 0.06
TCOF1-209ENST00000506630 B4E1Z4 1266 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 KDM4AO75164 1064 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 CDC45O75419 566 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 CCNA1P78396 465 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 PLS1Q14651 629 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 CCL14Q16627 93 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 LRRC26Q2I0M4 334 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 WDR78Q5VTH9 848 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 LHX8Q68G74 356 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.44■□□□□ 0.06
TCOF1-209ENST00000506630 ZKSCAN3Q9BRR0 538 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 TCP11L1Q9NUJ3 509 aa15.44■□□□□ 0.06
TCOF1-209ENST00000506630 ZNF236Q9UL36 1845 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 COL6A3P12111 3177 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 CCND3P30281 292 aaPredicted RBP15.43■□□□□ 0.06
TCOF1-209ENST00000506630 SLC1A4P43007 532 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 NT5C2P49902 561 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 FAM109BQ6ICB4 259 aaPredicted RBP15.43■□□□□ 0.06
TCOF1-209ENST00000506630 GPR142Q7Z601 462 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 PLEKHH3Q7Z736 793 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 MB21D1Q8N884 522 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 USP6NLQ92738 828 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 APBA2Q99767 749 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 SLF1Q9BQI6 1058 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 COL25A1Q9BXS0 654 aaPredicted RBP15.43■□□□□ 0.06
TCOF1-209ENST00000506630 KRT23Q9C075 422 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 CNNM2Q9H8M5 875 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 ANO2Q9NQ90 1003 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 PPP1R9AQ9ULJ8 1098 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 RBM8AQ9Y5S9 174 aaKnown RBP15.43■□□□□ 0.06
TCOF1-209ENST00000506630 SMCHD1A6NHR9 2005 aa15.43■□□□□ 0.06
TCOF1-209ENST00000506630 CYP21A2P08686 494 aa15.42■□□□□ 0.06
TCOF1-209ENST00000506630 BMP3P12645 472 aa15.42■□□□□ 0.06
TCOF1-209ENST00000506630 IKQ13123 557 aaPredicted RBP15.42■□□□□ 0.06
TCOF1-209ENST00000506630 MORN1Q5T089 497 aa15.42■□□□□ 0.06
TCOF1-209ENST00000506630 MFSD14CQ5VZR4 134 aa15.42■□□□□ 0.06
TCOF1-209ENST00000506630 IQCA1Q86XH1 822 aa15.42■□□□□ 0.06
TCOF1-209ENST00000506630 MAP4K1Q92918 833 aa15.42■□□□□ 0.06
TCOF1-209ENST00000506630 TMEM47Q9BQJ4 181 aa15.42■□□□□ 0.06
TCOF1-209ENST00000506630 LSG1Q9H089 658 aaKnown RBP15.42■□□□□ 0.06
TCOF1-209ENST00000506630 PRKAG2Q9UGJ0 569 aa15.42■□□□□ 0.06
TCOF1-209ENST00000506630 FEM1BQ9UK73 627 aa15.42■□□□□ 0.06
TCOF1-209ENST00000506630 TMEM232C9JQI7 657 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 POTEB2H3BUK9 544 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 TOP1P11387 765 aaKnown RBP15.41■□□□□ 0.06
TCOF1-209ENST00000506630 MCCP23508 829 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 NOVP48745 357 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 TRDNQ13061 729 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 MAP2K5Q13163 448 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 CCDC96Q2M329 555 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 RASGRP2Q7LDG7 609 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 KIFC2Q96AC6 838 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 GMCL1Q96IK5 515 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 SENP6Q9GZR1 1112 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-209ENST00000506630 SPATC1LQ9H0A9 340 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 FLRT1Q9NZU1 646 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 CTDP1Q9Y5B0 961 aaPredicted RBP15.41■□□□□ 0.06
TCOF1-209ENST00000506630 A0A0C4DFX4 3053 aa15.41■□□□□ 0.06
TCOF1-209ENST00000506630 VWA5AO00534 786 aa15.4■□□□□ 0.06
TCOF1-209ENST00000506630 MSCO60682 206 aa15.4■□□□□ 0.06
TCOF1-209ENST00000506630 STAT2P52630 851 aa15.4■□□□□ 0.06
TCOF1-209ENST00000506630 CCDC178Q5BJE1 867 aa15.4■□□□□ 0.06
TCOF1-209ENST00000506630 KCTD1Q719H9 257 aa15.4■□□□□ 0.06
TCOF1-209ENST00000506630 RALYLQ86SE5 291 aaKnown RBP15.4■□□□□ 0.06
TCOF1-209ENST00000506630 PRPF38AQ8NAV1 312 aaKnown RBP15.4■□□□□ 0.06
TCOF1-209ENST00000506630 MOV10L1Q9BXT6 1211 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms