RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 CCDC96Q2M329 555 aa21.1■□□□□ 0.97
NFKB1-204ENST00000504044 SNRNP48Q6IEG0 339 aaKnown RBP21.1■□□□□ 0.97
NFKB1-204ENST00000504044 RCSD1Q6JBY9 416 aa21.1■□□□□ 0.97
NFKB1-204ENST00000504044 KIAA1211Q6ZU35 1233 aa21.1■□□□□ 0.97
NFKB1-204ENST00000504044 CCDC136Q96JN2 1154 aa21.1■□□□□ 0.97
NFKB1-204ENST00000504044 HTATIP2Q9BUP3 242 aa21.1■□□□□ 0.97
NFKB1-204ENST00000504044 ZNF214Q9UL59 606 aaPredicted RBP21.1■□□□□ 0.97
NFKB1-204ENST00000504044 U3KPZ7 1027 aaPredicted RBP21.1■□□□□ 0.97
NFKB1-204ENST00000504044 NMT2O60551 498 aa21.09■□□□□ 0.97
NFKB1-204ENST00000504044 MSCO60682 206 aa21.09■□□□□ 0.97
NFKB1-204ENST00000504044 FARP2O94887 1054 aaPredicted RBP21.09■□□□□ 0.97
NFKB1-204ENST00000504044 NOVP48745 357 aa21.09■□□□□ 0.97
NFKB1-204ENST00000504044 MAP3K21Q5TCX8 1036 aa21.09■□□□□ 0.97
NFKB1-204ENST00000504044 OLFML2BQ68BL8 750 aa21.09■□□□□ 0.97
NFKB1-204ENST00000504044 DGKHQ86XP1 1220 aa21.09■□□□□ 0.97
NFKB1-204ENST00000504044 TBC1D10CQ8IV04 446 aa21.09■□□□□ 0.97
NFKB1-204ENST00000504044 ANKLE1Q8NAG6 615 aa21.09■□□□□ 0.97
NFKB1-204ENST00000504044 SLC38A10Q9HBR0 1119 aa21.09■□□□□ 0.97
NFKB1-204ENST00000504044 HTTP42858 3142 aa21.08■□□□□ 0.97
NFKB1-204ENST00000504044 CASC1Q6TDU7 716 aa21.08■□□□□ 0.97
NFKB1-204ENST00000504044 CPXCR1Q8N123 301 aa21.08■□□□□ 0.97
NFKB1-204ENST00000504044 REPS2Q8NFH8 660 aa21.08■□□□□ 0.97
NFKB1-204ENST00000504044 PNMA2Q9UL42 364 aa21.08■□□□□ 0.97
NFKB1-204ENST00000504044 MTMR7Q9Y216 660 aa21.08■□□□□ 0.97
NFKB1-204ENST00000504044 SLC4A3P48751 1232 aa21.07■□□□□ 0.96
NFKB1-204ENST00000504044 CACNB2Q08289 660 aaPredicted RBP21.07■□□□□ 0.96
NFKB1-204ENST00000504044 CCL14Q16627 93 aa21.07■□□□□ 0.96
NFKB1-204ENST00000504044 PRPF38BQ5VTL8 546 aaKnown RBP21.07■□□□□ 0.96
NFKB1-204ENST00000504044 CHST13Q8NET6 341 aa21.07■□□□□ 0.96
NFKB1-204ENST00000504044 SHISA4Q96DD7 197 aa21.07■□□□□ 0.96
NFKB1-204ENST00000504044 DDX11Q96FC9 970 aa21.07■□□□□ 0.96
NFKB1-204ENST00000504044 TMEM47Q9BQJ4 181 aa21.07■□□□□ 0.96
NFKB1-204ENST00000504044 UBAC1Q9BSL1 405 aa21.07■□□□□ 0.96
NFKB1-204ENST00000504044 DIS3Q9Y2L1 958 aaKnown RBP21.07■□□□□ 0.96
NFKB1-204ENST00000504044 A0A0G2JMZ2 1700 aa21.07■□□□□ 0.96
NFKB1-204ENST00000504044 NEDD4P46934 1319 aa21.06■□□□□ 0.96
NFKB1-204ENST00000504044 KDM4AO75164 1064 aa21.06■□□□□ 0.96
NFKB1-204ENST00000504044 TRIM32Q13049 653 aa21.06■□□□□ 0.96
NFKB1-204ENST00000504044 TKFCQ3LXA3 575 aa21.06■□□□□ 0.96
NFKB1-204ENST00000504044 NBPF3Q9H094 633 aa21.06■□□□□ 0.96
NFKB1-204ENST00000504044 CRISPLD2Q9H0B8 497 aa21.06■□□□□ 0.96
NFKB1-204ENST00000504044 KAT14Q9H8E8 782 aa21.06■□□□□ 0.96
NFKB1-204ENST00000504044 TACC3Q9Y6A5 838 aa21.06■□□□□ 0.96
NFKB1-204ENST00000504044 SGSM2O43147 1006 aa21.05■□□□□ 0.96
NFKB1-204ENST00000504044 KCTD1Q719H9 257 aa21.05■□□□□ 0.96
NFKB1-204ENST00000504044 NPLOC4Q8TAT6 608 aa21.05■□□□□ 0.96
NFKB1-204ENST00000504044 RAVER2Q9HCJ3 691 aaKnown RBP21.05■□□□□ 0.96
NFKB1-204ENST00000504044 CENPBP07199 599 aaPredicted RBP21.04■□□□□ 0.96
NFKB1-204ENST00000504044 CNGA1P29973 690 aa21.04■□□□□ 0.96
NFKB1-204ENST00000504044 BMP2KLQ5H9B9 411 aa21.04■□□□□ 0.96
NFKB1-204ENST00000504044 GPATCH4Q5T3I0 446 aaKnown RBP21.04■□□□□ 0.96
NFKB1-204ENST00000504044 NECAB2Q7Z6G3 386 aa21.04■□□□□ 0.96
NFKB1-204ENST00000504044 RALYLQ86SE5 291 aaKnown RBP21.04■□□□□ 0.96
NFKB1-204ENST00000504044 ANKRD35Q8N283 1001 aa21.04■□□□□ 0.96
NFKB1-204ENST00000504044 ZSCAN10Q96SZ4 725 aaPredicted RBP21.04■□□□□ 0.96
NFKB1-204ENST00000504044 NRBP1Q9UHY1 535 aa21.04■□□□□ 0.96
NFKB1-204ENST00000504044 KIAA0100Q14667 2235 aaKnown RBP21.03■□□□□ 0.96
NFKB1-204ENST00000504044 ERICH2A1L162 156 aa21.03■□□□□ 0.96
NFKB1-204ENST00000504044 B4E1Z4 1266 aa21.03■□□□□ 0.96
NFKB1-204ENST00000504044 COBLO75128 1261 aa21.03■□□□□ 0.96
NFKB1-204ENST00000504044 SART3Q15020 963 aaKnown RBP21.03■□□□□ 0.96
NFKB1-204ENST00000504044 MSL3Q8N5Y2 521 aaKnown RBP21.03■□□□□ 0.96
NFKB1-204ENST00000504044 MAML3Q96JK9 1138 aa21.03■□□□□ 0.96
NFKB1-204ENST00000504044 ACAD9Q9H845 621 aa21.03■□□□□ 0.96
NFKB1-204ENST00000504044 ZNF236Q9UL36 1845 aa21.02■□□□□ 0.96
NFKB1-204ENST00000504044 CYP2C19P33261 490 aa21.02■□□□□ 0.96
NFKB1-204ENST00000504044 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.02■□□□□ 0.96
NFKB1-204ENST00000504044 DPF3Q92784 378 aa21.02■□□□□ 0.96
NFKB1-204ENST00000504044 CHMP4CQ96CF2 233 aa21.02■□□□□ 0.96
NFKB1-204ENST00000504044 FLRT1Q9NZU1 646 aa21.02■□□□□ 0.96
NFKB1-204ENST00000504044 OGDHLQ9ULD0 1010 aa21.02■□□□□ 0.96
NFKB1-204ENST00000504044 PRR12Q9ULL5 1215 aa21.02■□□□□ 0.96
NFKB1-204ENST00000504044 MYH4Q9Y623 1939 aa21.02■□□□□ 0.95
NFKB1-204ENST00000504044 PDHBP11177 359 aa21.01■□□□□ 0.95
NFKB1-204ENST00000504044 CCND3P30281 292 aaPredicted RBP21.01■□□□□ 0.95
NFKB1-204ENST00000504044 SYDE2Q5VT97 1194 aa21.01■□□□□ 0.95
NFKB1-204ENST00000504044 BTNL9Q6UXG8 535 aa21.01■□□□□ 0.95
NFKB1-204ENST00000504044 PNMA1Q8ND90 353 aa21.01■□□□□ 0.95
NFKB1-204ENST00000504044 ZKSCAN3Q9BRR0 538 aa21.01■□□□□ 0.95
NFKB1-204ENST00000504044 ZSWIM5Q9P217 1185 aa21.01■□□□□ 0.95
NFKB1-204ENST00000504044 DDX20Q9UHI6 824 aaKnown RBP21.01■□□□□ 0.95
NFKB1-204ENST00000504044 CNPY2Q9Y2B0 182 aa21.01■□□□□ 0.95
NFKB1-204ENST00000504044 TNKSO95271 1327 aa21.01■□□□□ 0.95
NFKB1-204ENST00000504044 DOCK3Q8IZD9 2030 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 RLFQ13129 1914 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 PGK2P07205 417 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 ZNF792Q3KQV3 632 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 IFIT1BQ5T764 474 aaKnown RBP21■□□□□ 0.95
NFKB1-204ENST00000504044 CCDC174Q6PII3 467 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 NCOA7Q8NI08 942 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 ANKS1AQ92625 1134 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 IL25Q9H293 177 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 GPCPD1Q9NPB8 672 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 HOMER2Q9NSB8 354 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 CCPG1Q9ULG6 757 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 NR2E3Q9Y5X4 410 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 PFASO15067 1338 aa21■□□□□ 0.95
NFKB1-204ENST00000504044 FRMPD2Q68DX3 1309 aaPredicted RBP21■□□□□ 0.95
NFKB1-204ENST00000504044 PLXNB2O15031 1838 aa20.99■□□□□ 0.95
NFKB1-204ENST00000504044 ALAS1P13196 640 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms