RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 NMIQ13287 307 aaPredicted RBP19.32■□□□□ 0.68
SCLT1-204ENST00000503215 GJC2Q5T442 439 aaPredicted RBP19.32■□□□□ 0.68
SCLT1-204ENST00000503215 SNRNP48Q6IEG0 339 aaKnown RBP19.32■□□□□ 0.68
SCLT1-204ENST00000503215 PLEKHM2Q8IWE5 1019 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 GMCL1P1Q8NEA9 526 aa19.32■□□□□ 0.68
SCLT1-204ENST00000503215 SENP6Q9GZR1 1112 aaPredicted RBP19.32■□□□□ 0.68
SCLT1-204ENST00000503215 RAVER2Q9HCJ3 691 aaKnown RBP19.32■□□□□ 0.68
SCLT1-204ENST00000503215 SZT2Q5T011 3432 aa19.31■□□□□ 0.68
SCLT1-204ENST00000503215 FGAP02671 866 aa19.31■□□□□ 0.68
SCLT1-204ENST00000503215 KCTD2Q14681 263 aa19.31■□□□□ 0.68
SCLT1-204ENST00000503215 MCMDC2Q4G0Z9 681 aa19.31■□□□□ 0.68
SCLT1-204ENST00000503215 CHD1LQ86WJ1 897 aa19.31■□□□□ 0.68
SCLT1-204ENST00000503215 GDF15Q99988 308 aa19.31■□□□□ 0.68
SCLT1-204ENST00000503215 TEX13BQ9BXU2 312 aa19.31■□□□□ 0.68
SCLT1-204ENST00000503215 SLC5A4Q9NY91 659 aa19.31■□□□□ 0.68
SCLT1-204ENST00000503215 FRMPD3Q5JV73 1810 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 DNAH12Q6ZR08 3092 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 TRIM6-TRIM34B2RNG4 842 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 SEPT4O43236 478 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 MSCO60682 206 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 MCCP23508 829 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 ATN1P54259 1190 aaPredicted RBP19.3■□□□□ 0.68
SCLT1-204ENST00000503215 NUCB1Q02818 461 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 AAMPQ13685 434 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 ALX1Q15699 326 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 RILPL2Q969X0 211 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 SLC38A10Q9HBR0 1119 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 ANAPC4Q9UJX5 808 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 FEM1BQ9UK73 627 aa19.3■□□□□ 0.68
SCLT1-204ENST00000503215 SMCHD1A6NHR9 2005 aa19.29■□□□□ 0.68
SCLT1-204ENST00000503215 TMEM232C9JQI7 657 aa19.29■□□□□ 0.68
SCLT1-204ENST00000503215 RANBP6O60518 1105 aaKnown RBP19.29■□□□□ 0.68
SCLT1-204ENST00000503215 ZBED4O75132 1171 aa19.29■□□□□ 0.68
SCLT1-204ENST00000503215 BMP3P12645 472 aa19.29■□□□□ 0.68
SCLT1-204ENST00000503215 TINF2Q9BSI4 451 aa19.29■□□□□ 0.68
SCLT1-204ENST00000503215 SUPT16HQ9Y5B9 1047 aaKnown RBP19.29■□□□□ 0.68
SCLT1-204ENST00000503215 TSPY2A6NKD2 308 aa19.28■□□□□ 0.68
SCLT1-204ENST00000503215 DNM1LO00429 736 aa19.28■□□□□ 0.68
SCLT1-204ENST00000503215 SOX1O00570 391 aaPredicted RBP19.28■□□□□ 0.68
SCLT1-204ENST00000503215 ATP2A1O14983 1001 aa19.28■□□□□ 0.68
SCLT1-204ENST00000503215 MYCNP04198 464 aaPredicted RBP19.28■□□□□ 0.68
SCLT1-204ENST00000503215 HSPD1P10809 573 aaKnown RBP19.28■□□□□ 0.68
SCLT1-204ENST00000503215 MAGEA10P43363 369 aaPredicted RBP19.28■□□□□ 0.68
SCLT1-204ENST00000503215 SNAP25P60880 206 aa19.28■□□□□ 0.68
SCLT1-204ENST00000503215 LENG1Q96BZ8 264 aaPredicted RBP19.28■□□□□ 0.68
SCLT1-204ENST00000503215 ISY1Q9ULR0 285 aaKnown RBP19.28■□□□□ 0.68
SCLT1-204ENST00000503215 SYNPO2Q9UMS6 1093 aa19.28■□□□□ 0.68
SCLT1-204ENST00000503215 STX8Q9UNK0 236 aa19.28■□□□□ 0.68
SCLT1-204ENST00000503215 MTMR7Q9Y216 660 aa19.28■□□□□ 0.68
SCLT1-204ENST00000503215 DNAJC25-GNG10A0A024R161 153 aa19.27■□□□□ 0.68
SCLT1-204ENST00000503215 FGRP09769 529 aa19.27■□□□□ 0.68
SCLT1-204ENST00000503215 ZNF865P0CJ78 1059 aaPredicted RBP19.27■□□□□ 0.68
SCLT1-204ENST00000503215 HAND2P61296 217 aa19.27■□□□□ 0.68
SCLT1-204ENST00000503215 KCTD1Q719H9 257 aa19.27■□□□□ 0.68
SCLT1-204ENST00000503215 DIS3Q9Y2L1 958 aaKnown RBP19.27■□□□□ 0.68
SCLT1-204ENST00000503215 LAMA3Q16787 3333 aa19.27■□□□□ 0.68
SCLT1-204ENST00000503215 ORC4O43929 436 aa19.26■□□□□ 0.67
SCLT1-204ENST00000503215 SNAI1O95863 264 aaPredicted RBP19.26■□□□□ 0.67
SCLT1-204ENST00000503215 SDSP20132 328 aa19.26■□□□□ 0.67
SCLT1-204ENST00000503215 COPB2P35606 906 aa19.26■□□□□ 0.67
SCLT1-204ENST00000503215 RRP12Q5JTH9 1297 aaKnown RBP19.26■□□□□ 0.67
SCLT1-204ENST00000503215 DDX11Q96FC9 970 aa19.26■□□□□ 0.67
SCLT1-204ENST00000503215 GMCL1Q96IK5 515 aa19.26■□□□□ 0.67
SCLT1-204ENST00000503215 FGD4Q96M96 766 aa19.26■□□□□ 0.67
SCLT1-204ENST00000503215 ZNF536O15090 1300 aa19.26■□□□□ 0.67
SCLT1-204ENST00000503215 SLC1A4P43007 532 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 NOVP48745 357 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 LRRC41Q15345 812 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 ARRDC4Q8NCT1 418 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 STAG1Q8WVM7 1258 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 FERMT2Q96AC1 680 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 AGBL1Q96MI9 1066 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 OSBPL3Q9H4L5 887 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 TOMM22Q9NS69 142 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 HOMER2Q9NSB8 354 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 CTDP1Q9Y5B0 961 aaPredicted RBP19.25■□□□□ 0.67
SCLT1-204ENST00000503215 CCDC171Q6TFL3 1326 aa19.25■□□□□ 0.67
SCLT1-204ENST00000503215 PGK1P00558 417 aa19.24■□□□□ 0.67
SCLT1-204ENST00000503215 BMP8BP34820 402 aa19.24■□□□□ 0.67
SCLT1-204ENST00000503215 ADCYAP1R1P41586 468 aa19.24■□□□□ 0.67
SCLT1-204ENST00000503215 RCSD1Q6JBY9 416 aa19.24■□□□□ 0.67
SCLT1-204ENST00000503215 TBC1D10CQ8IV04 446 aa19.24■□□□□ 0.67
SCLT1-204ENST00000503215 LRCH3Q96II8 777 aa19.24■□□□□ 0.67
SCLT1-204ENST00000503215 PLXNA1Q9UIW2 1896 aa19.24■□□□□ 0.67
SCLT1-204ENST00000503215 STAT2P52630 851 aa19.23■□□□□ 0.67
SCLT1-204ENST00000503215 RTP1P59025 263 aa19.23■□□□□ 0.67
SCLT1-204ENST00000503215 IRX6P78412 446 aaPredicted RBP19.23■□□□□ 0.67
SCLT1-204ENST00000503215 MDM2Q00987 491 aaPredicted RBP19.23■□□□□ 0.67
SCLT1-204ENST00000503215 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
SCLT1-204ENST00000503215 TTBK2Q6IQ55 1244 aa19.23■□□□□ 0.67
SCLT1-204ENST00000503215 NRBP1Q9UHY1 535 aa19.23■□□□□ 0.67
SCLT1-204ENST00000503215 KBTBD13C9JR72 458 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 OAZ1P54368 228 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 IRX5P78411 483 aaPredicted RBP19.22■□□□□ 0.67
SCLT1-204ENST00000503215 CNTN2Q02246 1040 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 CCDC174Q6PII3 467 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 CWC27Q6UX04 472 aaKnown RBP19.22■□□□□ 0.67
SCLT1-204ENST00000503215 MAMDC4Q6UXC1 1216 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 SLC39A5Q6ZMH5 540 aa19.22■□□□□ 0.67
SCLT1-204ENST00000503215 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms