RNA–Protein interactions for RNA: ENST00000498645.1

LSAMP-206, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-206ENST00000498645 COL6A3P12111 3177 aa13.15□□□□□ -0.3
LSAMP-206ENST00000498645 MCM3APO60318 1980 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 IGKV6D-41A0A0C4DH26 115 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 ZBED4O75132 1171 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 TTLL1O95922 423 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
LSAMP-206ENST00000498645 RARBP10826 455 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 PPARAQ07869 468 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 ZNF792Q3KQV3 632 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 LRIT3Q3SXY7 679 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 TRIM60Q495X7 471 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 SLC39A5Q6ZMH5 540 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 CCDC129Q6ZRS4 1044 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 Q7L0L9 218 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 DEFB123Q8N688 67 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 PRPF38AQ8NAV1 312 aaKnown RBP13.14□□□□□ -0.31
LSAMP-206ENST00000498645 LENG1Q96BZ8 264 aaPredicted RBP13.14□□□□□ -0.31
LSAMP-206ENST00000498645 DDX11Q96FC9 970 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 RAVER2Q9HCJ3 691 aaKnown RBP13.14□□□□□ -0.31
LSAMP-206ENST00000498645 XPNPEP3Q9NQH7 507 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
LSAMP-206ENST00000498645 PGK1P00558 417 aa13.13□□□□□ -0.31
LSAMP-206ENST00000498645 TFAP4Q01664 338 aa13.13□□□□□ -0.31
LSAMP-206ENST00000498645 IKQ13123 557 aaPredicted RBP13.13□□□□□ -0.31
LSAMP-206ENST00000498645 ZMYM1Q5SVZ6 1142 aa13.13□□□□□ -0.31
LSAMP-206ENST00000498645 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
LSAMP-206ENST00000498645 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
LSAMP-206ENST00000498645 HOMER2Q9NSB8 354 aa13.13□□□□□ -0.31
LSAMP-206ENST00000498645 ZHX1Q9UKY1 873 aaPredicted RBP13.13□□□□□ -0.31
LSAMP-206ENST00000498645 DIS3Q9Y2L1 958 aaKnown RBP13.13□□□□□ -0.31
LSAMP-206ENST00000498645 AKR1A1P14550 325 aa13.12□□□□□ -0.31
LSAMP-206ENST00000498645 CTDSPL2Q05D32 466 aa13.12□□□□□ -0.31
LSAMP-206ENST00000498645 SLFN13Q68D06 897 aa13.12□□□□□ -0.31
LSAMP-206ENST00000498645 NEDD1Q8NHV4 660 aa13.12□□□□□ -0.31
LSAMP-206ENST00000498645 NRBP1Q9UHY1 535 aa13.12□□□□□ -0.31
LSAMP-206ENST00000498645 FEM1BQ9UK73 627 aa13.12□□□□□ -0.31
LSAMP-206ENST00000498645 MTMR7Q9Y216 660 aa13.12□□□□□ -0.31
LSAMP-206ENST00000498645 PLIN4Q96Q06 1357 aa13.11□□□□□ -0.31
LSAMP-206ENST00000498645 TMEM232C9JQI7 657 aa13.11□□□□□ -0.31
LSAMP-206ENST00000498645 ZNF865P0CJ78 1059 aaPredicted RBP13.11□□□□□ -0.31
LSAMP-206ENST00000498645 BMP3P12645 472 aa13.11□□□□□ -0.31
LSAMP-206ENST00000498645 RNF180Q86T96 592 aa13.11□□□□□ -0.31
LSAMP-206ENST00000498645 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
LSAMP-206ENST00000498645 GMCL1P1Q8NEA9 526 aa13.11□□□□□ -0.31
LSAMP-206ENST00000498645 YTHDC1Q96MU7 727 aaKnown RBP13.11□□□□□ -0.31
LSAMP-206ENST00000498645 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
LSAMP-206ENST00000498645 INCENPQ9NQS7 918 aa13.11□□□□□ -0.31
LSAMP-206ENST00000498645 STX8Q9UNK0 236 aa13.11□□□□□ -0.31
LSAMP-206ENST00000498645 TSPY2A6NKD2 308 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 SLC1A4P43007 532 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 SH3RF1Q7Z6J0 888 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 SLC17A8Q8NDX2 589 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 MKL1Q969V6 931 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 PDLIM7Q9NR12 457 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 TOMM22Q9NS69 142 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 SYNPO2Q9UMS6 1093 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 PHF24Q9UPV7 400 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 SALL3Q9BXA9 1300 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 SYNRGQ9UMZ2 1314 aa13.1□□□□□ -0.31
LSAMP-206ENST00000498645 A0A1W2PQ45 241 aaPredicted RBP13.09□□□□□ -0.31
LSAMP-206ENST00000498645 A0A1W2PQY0 241 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 ATP2A1O14983 1001 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 FOXP2O15409 715 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
LSAMP-206ENST00000498645 NMT2O60551 498 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
LSAMP-206ENST00000498645 SNAI1O95863 264 aaPredicted RBP13.09□□□□□ -0.31
LSAMP-206ENST00000498645 MCCP23508 829 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 STAT2P52630 851 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 TLE2Q04725 743 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 VPS53Q5VIR6 699 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 CCDC174Q6PII3 467 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 RASGRP2Q7LDG7 609 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 BADQ92934 168 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 EVI5LQ96CN4 794 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 FBXO40Q9UH90 709 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 FAM184BQ9ULE4 1060 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 SYNGAP1Q96PV0 1343 aa13.09□□□□□ -0.31
LSAMP-206ENST00000498645 DNAJC25-GNG10A0A024R161 153 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 TRIM43BA6NCK2 446 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 OAZ1P54368 228 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 SNAP25P60880 206 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 SNX17Q15036 470 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 KCTD1Q719H9 257 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 MSL3Q8N5Y2 521 aaKnown RBP13.08□□□□□ -0.32
LSAMP-206ENST00000498645 CHST13Q8NET6 341 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 TRIM43Q96BQ3 446 aaPredicted RBP13.08□□□□□ -0.32
LSAMP-206ENST00000498645 AGBL1Q96MI9 1066 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 FAM161BQ96MY7 647 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 RNF146Q9NTX7 359 aa13.08□□□□□ -0.32
LSAMP-206ENST00000498645 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.08□□□□□ -0.32
LSAMP-206ENST00000498645 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.08□□□□□ -0.32
LSAMP-206ENST00000498645 TRIM6-TRIM34B2RNG4 842 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 ADAMTS4O75173 837 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 CLTBP09497 229 aa13.07□□□□□ -0.32
LSAMP-206ENST00000498645 C6orf222P0C671 652 aaPredicted RBP13.07□□□□□ -0.32
LSAMP-206ENST00000498645 ALAS1P13196 640 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms