RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 SLFN13Q68D06 897 aa17.19■□□□□ 0.34
HDLBP-247ENST00000498595 REPS2Q8NFH8 660 aa17.19■□□□□ 0.34
HDLBP-247ENST00000498595 RLFQ13129 1914 aa17.19■□□□□ 0.34
HDLBP-247ENST00000498595 PLIN4Q96Q06 1357 aa17.18■□□□□ 0.34
HDLBP-247ENST00000498595 FDX1P10109 184 aa17.18■□□□□ 0.34
HDLBP-247ENST00000498595 PDE1AP54750 535 aa17.18■□□□□ 0.34
HDLBP-247ENST00000498595 ZNF792Q3KQV3 632 aa17.18■□□□□ 0.34
HDLBP-247ENST00000498595 TDHQ8IZJ6 230 aa17.18■□□□□ 0.34
HDLBP-247ENST00000498595 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
HDLBP-247ENST00000498595 XPNPEP3Q9NQH7 507 aa17.18■□□□□ 0.34
HDLBP-247ENST00000498595 HELLSQ9NRZ9 838 aa17.18■□□□□ 0.34
HDLBP-247ENST00000498595 FBXO40Q9UH90 709 aa17.18■□□□□ 0.34
HDLBP-247ENST00000498595 STX8Q9UNK0 236 aa17.18■□□□□ 0.34
HDLBP-247ENST00000498595 ATP2A1O14983 1001 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 STAT2P52630 851 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 RTP1P59025 263 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 RNF180Q86T96 592 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 TICAM2Q86XR7 235 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 ANKRD35Q8N283 1001 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 MSL3Q8N5Y2 521 aaKnown RBP17.17■□□□□ 0.34
HDLBP-247ENST00000498595 CHURC1Q8WUH1 139 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 SLC38A10Q9HBR0 1119 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 RAVER2Q9HCJ3 691 aaKnown RBP17.17■□□□□ 0.34
HDLBP-247ENST00000498595 ATP11BQ9Y2G3 1177 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 SALL3Q9BXA9 1300 aa17.17■□□□□ 0.34
HDLBP-247ENST00000498595 TRIM6-TRIM34B2RNG4 842 aa17.16■□□□□ 0.34
HDLBP-247ENST00000498595 RANBP6O60518 1105 aaKnown RBP17.16■□□□□ 0.34
HDLBP-247ENST00000498595 AKR1A1P14550 325 aa17.16■□□□□ 0.34
HDLBP-247ENST00000498595 SLC1A4P43007 532 aa17.16■□□□□ 0.34
HDLBP-247ENST00000498595 OAZ1P54368 228 aa17.16■□□□□ 0.34
HDLBP-247ENST00000498595 FAM160B2Q86V87 743 aa17.16■□□□□ 0.34
HDLBP-247ENST00000498595 CHST13Q8NET6 341 aa17.16■□□□□ 0.34
HDLBP-247ENST00000498595 TOMM22Q9NS69 142 aa17.16■□□□□ 0.34
HDLBP-247ENST00000498595 ALPK3Q96L96 1907 aa17.15■□□□□ 0.34
HDLBP-247ENST00000498595 GREB1LQ9C091 1923 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-247ENST00000498595 TMEM232C9JQI7 657 aa17.15■□□□□ 0.34
HDLBP-247ENST00000498595 ADCYAP1R1P41586 468 aa17.15■□□□□ 0.34
HDLBP-247ENST00000498595 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-247ENST00000498595 CTDSPL2Q05D32 466 aa17.15■□□□□ 0.34
HDLBP-247ENST00000498595 LRRC41Q15345 812 aa17.15■□□□□ 0.34
HDLBP-247ENST00000498595 SLC39A5Q6ZMH5 540 aa17.15■□□□□ 0.34
HDLBP-247ENST00000498595 GMCL1Q96IK5 515 aa17.15■□□□□ 0.34
HDLBP-247ENST00000498595 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
HDLBP-247ENST00000498595 SYNGAP1Q96PV0 1343 aa17.15■□□□□ 0.34
HDLBP-247ENST00000498595 MFAP1P55081 439 aaKnown RBP17.14■□□□□ 0.33
HDLBP-247ENST00000498595 MCMDC2Q4G0Z9 681 aa17.14■□□□□ 0.33
HDLBP-247ENST00000498595 STAG1Q8WVM7 1258 aa17.14■□□□□ 0.33
HDLBP-247ENST00000498595 PRDM5Q9NQX1 630 aaPredicted RBP17.14■□□□□ 0.33
HDLBP-247ENST00000498595 ANAPC4Q9UJX5 808 aa17.14■□□□□ 0.33
HDLBP-247ENST00000498595 FAM184BQ9ULE4 1060 aa17.14■□□□□ 0.33
HDLBP-247ENST00000498595 RIPK3Q9Y572 518 aa17.14■□□□□ 0.33
HDLBP-247ENST00000498595 RANBP2P49792 3224 aaKnown RBP17.13■□□□□ 0.33
HDLBP-247ENST00000498595 PARP14Q460N5 1801 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 FRMPD3Q5JV73 1810 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 SOX1O00570 391 aaPredicted RBP17.13■□□□□ 0.33
HDLBP-247ENST00000498595 MCCP23508 829 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 ALX1Q15699 326 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 LRIT3Q3SXY7 679 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 B4GALNT3Q6L9W6 998 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 ZNF467Q7Z7K2 595 aaPredicted RBP17.13■□□□□ 0.33
HDLBP-247ENST00000498595 RILPL2Q969X0 211 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 FERMT2Q96AC1 680 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 LRCH3Q96II8 777 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 HOMER2Q9NSB8 354 aa17.13■□□□□ 0.33
HDLBP-247ENST00000498595 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
HDLBP-247ENST00000498595 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
HDLBP-247ENST00000498595 COL11A1P12107 1806 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-247ENST00000498595 ORC4O43929 436 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 PGK1P00558 417 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 ZNF865P0CJ78 1059 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-247ENST00000498595 TAL1P17542 331 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-247ENST00000498595 CCDC96Q2M329 555 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 TKFCQ3LXA3 575 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 RRP12Q5JTH9 1297 aaKnown RBP17.12■□□□□ 0.33
HDLBP-247ENST00000498595 VPS53Q5VIR6 699 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 GPR153Q6NV75 609 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 MAMDC4Q6UXC1 1216 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 CHMP4CQ96CF2 233 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 ACAD9Q9H845 621 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 SPC25Q9HBM1 224 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
HDLBP-247ENST00000498595 DNAJC25-GNG10A0A024R161 153 aa17.11■□□□□ 0.33
HDLBP-247ENST00000498595 POTEB2H3BUK9 544 aa17.11■□□□□ 0.33
HDLBP-247ENST00000498595 TRIM60Q495X7 471 aa17.11■□□□□ 0.33
HDLBP-247ENST00000498595 RCSD1Q6JBY9 416 aa17.11■□□□□ 0.33
HDLBP-247ENST00000498595 KCTD1Q719H9 257 aa17.11■□□□□ 0.33
HDLBP-247ENST00000498595 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.11■□□□□ 0.33
HDLBP-247ENST00000498595 FAM227BQ96M60 508 aa17.11■□□□□ 0.33
HDLBP-247ENST00000498595 ABHD16BQ9H3Z7 469 aa17.11■□□□□ 0.33
HDLBP-247ENST00000498595 PHF24Q9UPV7 400 aa17.11■□□□□ 0.33
HDLBP-247ENST00000498595 A0A0D9SFI3 127 aa17.1■□□□□ 0.33
HDLBP-247ENST00000498595 PLA2G6O60733 806 aa17.1■□□□□ 0.33
HDLBP-247ENST00000498595 FGAP02671 866 aa17.1■□□□□ 0.33
HDLBP-247ENST00000498595 NMIQ13287 307 aaPredicted RBP17.1■□□□□ 0.33
HDLBP-247ENST00000498595 ACVR2BQ13705 512 aa17.1■□□□□ 0.33
HDLBP-247ENST00000498595 CHD1LQ86WJ1 897 aa17.1■□□□□ 0.33
HDLBP-247ENST00000498595 SMC5Q8IY18 1101 aa17.1■□□□□ 0.33
HDLBP-247ENST00000498595 NUP133Q8WUM0 1156 aa17.1■□□□□ 0.33
HDLBP-247ENST00000498595 DCAF4Q8WV16 495 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms