RNA–Protein interactions for RNA: ENST00000497980.5

STX1A-214, Transcript of syntaxin 1A, humanhuman

TSL 3

Gene STX1A, Length 503 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-214ENST00000497980 HAND2P61296 217 aa28.79■■■□□ 2.2
STX1A-214ENST00000497980 KCTD2Q14681 263 aa28.79■■■□□ 2.2
STX1A-214ENST00000497980 RRP12Q5JTH9 1297 aaKnown RBP28.79■■■□□ 2.2
STX1A-214ENST00000497980 CHURC1Q8WUH1 139 aa28.79■■■□□ 2.2
STX1A-214ENST00000497980 RUFY2Q8WXA3 655 aa28.79■■■□□ 2.2
STX1A-214ENST00000497980 MMP19Q99542 508 aa28.79■■■□□ 2.2
STX1A-214ENST00000497980 IL17RBQ9NRM6 502 aa28.79■■■□□ 2.2
STX1A-214ENST00000497980 ISY1Q9ULR0 285 aaKnown RBP28.79■■■□□ 2.2
STX1A-214ENST00000497980 MSCO60682 206 aa28.78■■■□□ 2.2
STX1A-214ENST00000497980 ESR2Q92731 530 aa28.78■■■□□ 2.2
STX1A-214ENST00000497980 KIFC2Q96AC6 838 aa28.78■■■□□ 2.2
STX1A-214ENST00000497980 PLA2G6O60733 806 aa28.77■■■□□ 2.2
STX1A-214ENST00000497980 NPLOC4Q8TAT6 608 aa28.77■■■□□ 2.2
STX1A-214ENST00000497980 SLC38A10Q9HBR0 1119 aa28.77■■■□□ 2.2
STX1A-214ENST00000497980 INCENPQ9NQS7 918 aa28.77■■■□□ 2.2
STX1A-214ENST00000497980 TNRC18O15417 2968 aaPredicted RBP28.77■■■□□ 2.2
STX1A-214ENST00000497980 IKQ13123 557 aaPredicted RBP28.76■■■□□ 2.19
STX1A-214ENST00000497980 IMMTQ16891 758 aaKnown RBP28.76■■■□□ 2.19
STX1A-214ENST00000497980 SNRNP48Q6IEG0 339 aaKnown RBP28.76■■■□□ 2.19
STX1A-214ENST00000497980 FLRT1Q9NZU1 646 aa28.76■■■□□ 2.19
STX1A-214ENST00000497980 OGDHLQ9ULD0 1010 aa28.76■■■□□ 2.19
STX1A-214ENST00000497980 TACC3Q9Y6A5 838 aa28.76■■■□□ 2.19
STX1A-214ENST00000497980 TMEM232C9JQI7 657 aa28.75■■■□□ 2.19
STX1A-214ENST00000497980 NMT2O60551 498 aa28.75■■■□□ 2.19
STX1A-214ENST00000497980 TOP1P11387 765 aaKnown RBP28.75■■■□□ 2.19
STX1A-214ENST00000497980 CCDC178Q5BJE1 867 aa28.75■■■□□ 2.19
STX1A-214ENST00000497980 TBC1D10CQ8IV04 446 aa28.75■■■□□ 2.19
STX1A-214ENST00000497980 DCAF4Q8WV16 495 aa28.75■■■□□ 2.19
STX1A-214ENST00000497980 TTC14Q96N46 770 aa28.75■■■□□ 2.19
STX1A-214ENST00000497980 FBXO40Q9UH90 709 aa28.75■■■□□ 2.19
STX1A-214ENST00000497980 DIS3Q9Y2L1 958 aaKnown RBP28.75■■■□□ 2.19
STX1A-214ENST00000497980 NECAB2Q7Z6G3 386 aa28.74■■■□□ 2.19
STX1A-214ENST00000497980 NBPF3Q9H094 633 aa28.74■■■□□ 2.19
STX1A-214ENST00000497980 COBLO75128 1261 aa28.73■■■□□ 2.19
STX1A-214ENST00000497980 IGHA2P01877 340 aa28.73■■■□□ 2.19
STX1A-214ENST00000497980 MCCP23508 829 aa28.73■■■□□ 2.19
STX1A-214ENST00000497980 RCSD1Q6JBY9 416 aa28.73■■■□□ 2.19
STX1A-214ENST00000497980 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.73■■■□□ 2.19
STX1A-214ENST00000497980 NRBP1Q9UHY1 535 aa28.73■■■□□ 2.19
STX1A-214ENST00000497980 CCND3P30281 292 aaPredicted RBP28.72■■■□□ 2.19
STX1A-214ENST00000497980 IQCA1Q86XH1 822 aa28.72■■■□□ 2.19
STX1A-214ENST00000497980 CPXCR1Q8N123 301 aa28.72■■■□□ 2.19
STX1A-214ENST00000497980 CHST13Q8NET6 341 aa28.72■■■□□ 2.19
STX1A-214ENST00000497980 MAML3Q96JK9 1138 aa28.72■■■□□ 2.19
STX1A-214ENST00000497980 COL11A1P12107 1806 aaPredicted RBP28.71■■■□□ 2.19
STX1A-214ENST00000497980 CYBAP13498 195 aa28.71■■■□□ 2.19
STX1A-214ENST00000497980 CYP2C19P33261 490 aa28.71■■■□□ 2.19
STX1A-214ENST00000497980 CCDC96Q2M329 555 aa28.71■■■□□ 2.19
STX1A-214ENST00000497980 CENPQQ7L2Z9 268 aaPredicted RBP28.71■■■□□ 2.19
STX1A-214ENST00000497980 DPF3Q92784 378 aa28.71■■■□□ 2.19
STX1A-214ENST00000497980 CNNM2Q9H8M5 875 aa28.71■■■□□ 2.19
STX1A-214ENST00000497980 DDX20Q9UHI6 824 aaKnown RBP28.71■■■□□ 2.19
STX1A-214ENST00000497980 LAMA4Q16363 1823 aa28.71■■■□□ 2.19
STX1A-214ENST00000497980 NEDD4P46934 1319 aa28.7■■■□□ 2.19
STX1A-214ENST00000497980 MSL3Q8N5Y2 521 aaKnown RBP28.7■■■□□ 2.18
STX1A-214ENST00000497980 TMEM47Q9BQJ4 181 aa28.7■■■□□ 2.18
STX1A-214ENST00000497980 RAVER2Q9HCJ3 691 aaKnown RBP28.7■■■□□ 2.18
STX1A-214ENST00000497980 NR2E3Q9Y5X4 410 aa28.7■■■□□ 2.18
STX1A-214ENST00000497980 CHMLP26374 656 aa28.69■■■□□ 2.18
STX1A-214ENST00000497980 TKFCQ3LXA3 575 aa28.69■■■□□ 2.18
STX1A-214ENST00000497980 DGKHQ86XP1 1220 aa28.69■■■□□ 2.18
STX1A-214ENST00000497980 DDX11Q96FC9 970 aa28.69■■■□□ 2.18
STX1A-214ENST00000497980 PAWRQ96IZ0 340 aaKnown RBP28.69■■■□□ 2.18
STX1A-214ENST00000497980 KRT23Q9C075 422 aa28.69■■■□□ 2.18
STX1A-214ENST00000497980 CNGA1P29973 690 aa28.68■■■□□ 2.18
STX1A-214ENST00000497980 ZNF792Q3KQV3 632 aa28.68■■■□□ 2.18
STX1A-214ENST00000497980 LHX8Q68G74 356 aa28.68■■■□□ 2.18
STX1A-214ENST00000497980 KCTD1Q719H9 257 aa28.68■■■□□ 2.18
STX1A-214ENST00000497980 C11orf49Q9H6J7 331 aa28.68■■■□□ 2.18
STX1A-214ENST00000497980 PNMA2Q9UL42 364 aa28.67■■■□□ 2.18
STX1A-214ENST00000497980 RIPK3Q9Y572 518 aa28.67■■■□□ 2.18
STX1A-214ENST00000497980 SEPT4O43236 478 aa28.66■■■□□ 2.18
STX1A-214ENST00000497980 PGK2P07205 417 aa28.66■■■□□ 2.18
STX1A-214ENST00000497980 ANKRD35Q8N283 1001 aa28.66■■■□□ 2.18
STX1A-214ENST00000497980 DIS3LQ8TF46 1054 aaKnown RBP28.66■■■□□ 2.18
STX1A-214ENST00000497980 ACAD9Q9H845 621 aa28.66■■■□□ 2.18
STX1A-214ENST00000497980 MTMR7Q9Y216 660 aa28.66■■■□□ 2.18
STX1A-214ENST00000497980 KDM4AO75164 1064 aa28.65■■■□□ 2.18
STX1A-214ENST00000497980 BTNL9Q6UXG8 535 aa28.65■■■□□ 2.18
STX1A-214ENST00000497980 ZNF467Q7Z7K2 595 aaPredicted RBP28.65■■■□□ 2.18
STX1A-214ENST00000497980 TINF2Q9BSI4 451 aa28.65■■■□□ 2.18
STX1A-214ENST00000497980 PRR12Q9ULL5 1215 aa28.65■■■□□ 2.18
STX1A-214ENST00000497980 U3KPZ7 1027 aaPredicted RBP28.65■■■□□ 2.18
STX1A-214ENST00000497980 PDHBP11177 359 aa28.64■■■□□ 2.18
STX1A-214ENST00000497980 SLC4A3P48751 1232 aa28.64■■■□□ 2.18
STX1A-214ENST00000497980 GPATCH4Q5T3I0 446 aaKnown RBP28.64■■■□□ 2.18
STX1A-214ENST00000497980 IL25Q9H293 177 aa28.64■■■□□ 2.18
STX1A-214ENST00000497980 CNPY2Q9Y2B0 182 aa28.64■■■□□ 2.18
STX1A-214ENST00000497980 SYNGAP1Q96PV0 1343 aa28.64■■■□□ 2.17
STX1A-214ENST00000497980 DNAJC25-GNG10A0A024R161 153 aa28.63■■■□□ 2.17
STX1A-214ENST00000497980 SGSM2O43147 1006 aa28.63■■■□□ 2.17
STX1A-214ENST00000497980 EVI5O60447 810 aa28.63■■■□□ 2.17
STX1A-214ENST00000497980 TRDNQ13061 729 aa28.63■■■□□ 2.17
STX1A-214ENST00000497980 TRPV1Q8NER1 839 aa28.63■■■□□ 2.17
STX1A-214ENST00000497980 UBAC1Q9BSL1 405 aa28.63■■■□□ 2.17
STX1A-214ENST00000497980 PFASO15067 1338 aa28.63■■■□□ 2.17
STX1A-214ENST00000497980 B4E1Z4 1266 aa28.62■■■□□ 2.17
STX1A-214ENST00000497980 SNHG28P0DPA3 235 aa28.62■■■□□ 2.17
STX1A-214ENST00000497980 MNX1P50219 401 aaPredicted RBP28.62■■■□□ 2.17
STX1A-214ENST00000497980 SYDE2Q5VT97 1194 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms