RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 ZNF76P36508 570 aa5.74□□□□□ -1.49
VPS26A-208ENST00000497022 APOBRQ0VD83 1088 aa5.74□□□□□ -1.49
VPS26A-208ENST00000497022 ZXDCQ2QGD7 858 aaPredicted RBP5.74□□□□□ -1.49
VPS26A-208ENST00000497022 SEZ6Q53EL9 994 aa5.74□□□□□ -1.49
VPS26A-208ENST00000497022 ARSHQ5FYA8 562 aa5.74□□□□□ -1.49
VPS26A-208ENST00000497022 FRMD5Q7Z6J6 570 aa5.74□□□□□ -1.49
VPS26A-208ENST00000497022 REXO1Q8N1G1 1221 aaKnown RBP5.74□□□□□ -1.49
VPS26A-208ENST00000497022 G6PC3Q9BUM1 346 aa5.74□□□□□ -1.49
VPS26A-208ENST00000497022 NT5C1AQ9BXI3 368 aa5.74□□□□□ -1.49
VPS26A-208ENST00000497022 NOTOA8MTQ0 251 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 GBP1P32455 592 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 EPHB3P54753 998 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 CLCQ05315 142 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 SLITRK4Q8IW52 837 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 VWCEQ96DN2 955 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 EAF1Q96JC9 268 aaPredicted RBP5.73□□□□□ -1.49
VPS26A-208ENST00000497022 SPON2Q9BUD6 331 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 ASPNQ9BXN1 380 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 CNTD2Q9H8S5 307 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 EPB41L4AQ9HCS5 686 aaPredicted RBP5.73□□□□□ -1.49
VPS26A-208ENST00000497022 GMIPQ9P107 970 aa5.73□□□□□ -1.49
VPS26A-208ENST00000497022 ABLIM1O14639 778 aa5.72□□□□□ -1.49
VPS26A-208ENST00000497022 NRDCO43847 1150 aa5.72□□□□□ -1.49
VPS26A-208ENST00000497022 UBOX5O94941 541 aa5.72□□□□□ -1.49
VPS26A-208ENST00000497022 RAG1P15918 1043 aa5.72□□□□□ -1.49
VPS26A-208ENST00000497022 KIR2DL1P43626 348 aaPredicted RBP5.72□□□□□ -1.49
VPS26A-208ENST00000497022 KIR2DL2P43627 348 aaPredicted RBP5.72□□□□□ -1.49
VPS26A-208ENST00000497022 YBX1P67809 324 aaKnown RBP5.72□□□□□ -1.49
VPS26A-208ENST00000497022 FANCCQ00597 558 aa5.72□□□□□ -1.49
VPS26A-208ENST00000497022 CDCP2Q5VXM1 449 aa5.72□□□□□ -1.49
VPS26A-208ENST00000497022 GK5Q6ZS86 529 aa5.72□□□□□ -1.49
VPS26A-208ENST00000497022 KIAA0825Q8IV33 1275 aa5.72□□□□□ -1.49
VPS26A-208ENST00000497022 NKD1Q969G9 470 aa5.72□□□□□ -1.49
VPS26A-208ENST00000497022 METTL5Q9NRN9 209 aaKnown RBP5.72□□□□□ -1.49
VPS26A-208ENST00000497022 CNOT11Q9UKZ1 510 aaKnown RBP5.72□□□□□ -1.49
VPS26A-208ENST00000497022 VIPR1P32241 457 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 MCM4P33991 863 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 ZNF165P49910 485 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 GALK1P51570 392 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 CHMP4BP1P59074 171 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 TRIM26Q12899 539 aaPredicted RBP5.71□□□□□ -1.5
VPS26A-208ENST00000497022 OVOS1Q6IE37 1185 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 CNKSR3Q6P9H4 555 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 RNF111Q6ZNA4 994 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 USP48Q86UV5 1035 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 ZDHHC14Q8IZN3 488 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 LINC01356Q8N9X3 169 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 ENOX1Q8TC92 643 aaKnown RBP5.71□□□□□ -1.5
VPS26A-208ENST00000497022 ATG4CQ96DT6 458 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 CNNM2Q9H8M5 875 aa5.71□□□□□ -1.5
VPS26A-208ENST00000497022 POLR2BP30876 1174 aaKnown RBP5.7□□□□□ -1.5
VPS26A-208ENST00000497022 ZNF394Q53GI3 561 aa5.7□□□□□ -1.5
VPS26A-208ENST00000497022 NLRC3Q7RTR2 1065 aa5.7□□□□□ -1.5
VPS26A-208ENST00000497022 FAM129CQ86XR2 697 aa5.7□□□□□ -1.5
VPS26A-208ENST00000497022 MZB1Q8WU39 189 aa5.7□□□□□ -1.5
VPS26A-208ENST00000497022 RNF34Q969K3 372 aa5.7□□□□□ -1.5
VPS26A-208ENST00000497022 KRTAP9-8Q9BYQ0 159 aa5.7□□□□□ -1.5
VPS26A-208ENST00000497022 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS26A-208ENST00000497022 ANTXR1Q9H6X2 564 aa5.7□□□□□ -1.5
VPS26A-208ENST00000497022 MYRFQ9Y2G1 1151 aa5.7□□□□□ -1.5
VPS26A-208ENST00000497022 SHISA3A0PJX4 238 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 USP2O75604 605 aaPredicted RBP5.69□□□□□ -1.5
VPS26A-208ENST00000497022 EFEMP2O95967 443 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 PNLIPP16233 465 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 VAMP1P23763 118 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 CDR1P51861 262 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 PLP2Q04941 152 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 SLC14A2Q15849 920 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 CLEC16AQ2KHT3 1053 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 LRRFIP1Q32MZ4 808 aaKnown RBP5.69□□□□□ -1.5
VPS26A-208ENST00000497022 NBPF12Q5TAG4 269 aaPredicted RBP5.69□□□□□ -1.5
VPS26A-208ENST00000497022 SIRT2Q8IXJ6 389 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 TMEFF1Q8IYR6 380 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 MAP6Q96JE9 813 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 ADAM7Q9H2U9 754 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 PCDHGB7Q9Y5F8 929 aa5.69□□□□□ -1.5
VPS26A-208ENST00000497022 MEIS3P2A8K0S8 358 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 RECKO95980 971 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 NME1P15531 152 aaKnown RBP5.68□□□□□ -1.5
VPS26A-208ENST00000497022 CCNFP41002 786 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 ERVFRD-1P60508 538 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 RACK1P63244 317 aaKnown RBP5.68□□□□□ -1.5
VPS26A-208ENST00000497022 RNF4P78317 190 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 CAP1Q01518 475 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 RAD51AP2Q09MP3 1159 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 TMEM62Q0P6H9 643 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 SYT8Q8NBV8 401 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 SYTL5Q8TDW5 730 aaPredicted RBP5.68□□□□□ -1.5
VPS26A-208ENST00000497022 BDH2Q9BUT1 245 aa5.68□□□□□ -1.5
VPS26A-208ENST00000497022 TNFRSF10CO14798 259 aa5.67□□□□□ -1.5
VPS26A-208ENST00000497022 SCAMP3O14828 347 aaKnown RBP5.67□□□□□ -1.5
VPS26A-208ENST00000497022 RPL10P27635 214 aaKnown RBP5.67□□□□□ -1.5
VPS26A-208ENST00000497022 NMIQ13287 307 aaPredicted RBP5.67□□□□□ -1.5
VPS26A-208ENST00000497022 VMACQ2NL98 169 aa5.67□□□□□ -1.5
VPS26A-208ENST00000497022 NBPF9Q3BBW0 867 aa5.67□□□□□ -1.5
VPS26A-208ENST00000497022 CEP128Q6ZU80 1094 aa5.67□□□□□ -1.5
VPS26A-208ENST00000497022 ASCC2Q9H1I8 757 aaPredicted RBP5.67□□□□□ -1.5
VPS26A-208ENST00000497022 ZMYM5Q9UJ78 669 aa5.67□□□□□ -1.5
VPS26A-208ENST00000497022 DDX41Q9UJV9 622 aaKnown RBP5.67□□□□□ -1.5
VPS26A-208ENST00000497022 CLEC3AO75596 197 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms