RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ANTXR1Q9H6X2 564 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 PIDD1Q9HB75 910 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 SSU72Q9NP77 194 aaKnown RBP3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 ODF2LQ9ULJ1 636 aa3.67□□□□□ -1.82
SNRNP48-202ENST00000496946 PRR19A6NJB7 356 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 GOLGA6L6A8MZA4 724 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 HTATSF1O43719 755 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 PF4P02776 101 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 H2AFB1P0C5Y9 115 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 H2AFB2P0C5Z0 115 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 TGFB3P10600 412 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 VAMP1P23763 118 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 POLR2BP30876 1174 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 ETF1P62495 437 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 ID3Q02535 119 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 RASA3Q14644 834 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 RNF43Q68DV7 783 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 CCDC174Q6PII3 467 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 NFXL1Q6ZNB6 911 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 UBE2Q1Q7Z7E8 422 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 JAZF1Q86VZ6 243 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 FAM86C1Q9NVL1 165 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 GGT7Q9UJ14 662 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 MRPL42Q9Y6G3 142 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 PPFIA2O75334 1257 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 TPPPO94811 219 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 CD53P19397 219 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 LMNB1P20700 586 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 DNAJA1P31689 397 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 GBP2P32456 591 aaPredicted RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 CD97P48960 835 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 MRPL58Q14197 206 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 DHX8Q14562 1220 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 TAF1CQ15572 869 aaPredicted RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 RPUSD2Q8IZ73 545 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 STAG1Q8WVM7 1258 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 IL17RAQ96F46 866 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 FMNL2Q96PY5 1086 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 SUFUQ9UMX1 484 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 NOL7Q9UMY1 257 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 RABL2BQ9UNT1 228 aa3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 THRAP3Q9Y2W1 955 aaKnown RBP3.66□□□□□ -1.82
SNRNP48-202ENST00000496946 MEGF11A6BM72 1044 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 HIP1RO75146 1068 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 GUCY2CP25092 1073 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 MAN1A1P33908 653 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 PTPN12Q05209 780 aaKnown RBP3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 AP3B2Q13367 1082 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 COL19A1Q14993 1142 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 ZSCAN26Q16670 478 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 MAP9Q49MG5 647 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 SOGA3Q5TF21 947 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 SEZ6L2Q6UXD5 910 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 OTUD6AQ7L8S5 288 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 TAX1BP1Q86VP1 789 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 LMNTD2Q8IXW0 634 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 FAM184AQ8NB25 1140 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 TMEM87AQ8NBN3 555 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 C17orf50Q8WW18 174 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 ELMO3Q96BJ8 720 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 FAM83CQ9BQN1 747 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 DUSP23Q9BVJ7 150 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 ZHX3Q9H4I2 956 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 CAPN10Q9HC96 672 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 PPP4R2Q9NY27 417 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 DDX56Q9NY93 547 aaKnown RBP3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 KLHL3Q9UH77 587 aa3.65□□□□□ -1.82
SNRNP48-202ENST00000496946 DYTNA2CJ06 578 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 TRIM64CA6NLI5 447 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 TMCO5BA8MYB1 307 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 LDHAP00338 332 aaKnown RBP3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 IGLV1-40P01703 118 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 FOSL1P15407 271 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 GRK4P32298 578 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 ITGAEP38570 1179 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 TNNI2P48788 182 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 RIPK4P57078 832 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 RACK1P63244 317 aaKnown RBP3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 CCDC15Q0P6D6 951 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 BNIP3Q12983 259 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 CAMK2GQ13555 558 aaPredicted RBP3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 KIF4BQ2VIQ3 1234 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 EFCAB2Q5VUJ9 269 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 ZAR1Q86SH2 424 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 LCA5Q86VQ0 697 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 SKAP1Q86WV1 359 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 NT5DC4Q86YG4 428 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 PHC3Q8NDX5 983 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 TEKT1Q969V4 418 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 HEXIM2Q96MH2 286 aaKnown RBP3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 KIF2CQ99661 725 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 RWDD1Q9H446 243 aaPredicted RBP3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 PCMTD2Q9NV79 361 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 CALCOCO1Q9P1Z2 691 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 CC2D2AQ9P2K1 1620 aa3.65□□□□□ -1.83
SNRNP48-202ENST00000496946 PABPN1LA6NDY0 278 aaKnown RBP3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 NPHP1O15259 732 aa3.64□□□□□ -1.83
SNRNP48-202ENST00000496946 MTA2O94776 668 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms