RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 RILPL1Q5EBL4 403 aa16.77■□□□□ 0.27
MACF1-223ENST00000496360 CAVIN3Q969G5 261 aa16.77■□□□□ 0.27
MACF1-223ENST00000496360 GSDMAQ96QA5 445 aa16.77■□□□□ 0.27
MACF1-223ENST00000496360 EPN3Q9H201 632 aa16.77■□□□□ 0.27
MACF1-223ENST00000496360 A0A1B0GUA9 196 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 ACTN4O43707 911 aaKnown RBP16.76■□□□□ 0.27
MACF1-223ENST00000496360 RASSF9O75901 435 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 A1BGP04217 495 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 YY1P25490 414 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 KDM7AQ6ZMT4 941 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 CHST3Q7LGC8 479 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 FBXO2Q9UK22 296 aaPredicted RBP16.76■□□□□ 0.27
MACF1-223ENST00000496360 ODF2LQ9ULJ1 636 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 C10orf71Q711Q0 1435 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 FOXN1O15353 648 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 POLR2DO15514 142 aaKnown RBP16.76■□□□□ 0.27
MACF1-223ENST00000496360 PPFIA3O75145 1194 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 IL6STP40189 918 aaPredicted RBP16.76■□□□□ 0.27
MACF1-223ENST00000496360 NAP1L1P55209 391 aaKnown RBP16.76■□□□□ 0.27
MACF1-223ENST00000496360 IFFO1Q0D2I5 559 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 CCDC40Q4G0X9 1142 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 RIC3Q7Z5B4 369 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 TBC1D2BQ9UPU7 963 aa16.76■□□□□ 0.27
MACF1-223ENST00000496360 SRPRBQ9Y5M8 271 aaKnown RBP16.76■□□□□ 0.27
MACF1-223ENST00000496360 PRAMEF22A3QJZ6 481 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 GOLIM4O00461 696 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 METAP2P50579 478 aaKnown RBP eCLIP16.75■□□□□ 0.27
MACF1-223ENST00000496360 SAFBQ15424 915 aaKnown RBP eCLIP16.75■□□□□ 0.27
MACF1-223ENST00000496360 PROSER3Q2NL68 480 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 IQCA1Q86XH1 822 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 NOSTRINQ8IVI9 506 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 STK11IPQ8N1F8 1099 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 CAGE1Q8TC20 777 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 JAKMIP2Q96AA8 810 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
MACF1-223ENST00000496360 SLF1Q9BQI6 1058 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 METTL22Q9BUU2 404 aaPredicted RBP16.75■□□□□ 0.27
MACF1-223ENST00000496360 GUCA1BQ9UMX6 200 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 KIF13BQ9NQT8 1826 aa16.75■□□□□ 0.27
MACF1-223ENST00000496360 SH2B2O14492 632 aaPredicted RBP16.74■□□□□ 0.27
MACF1-223ENST00000496360 PRLRP16471 622 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 TM4SF1P30408 202 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 SLC8A1P32418 973 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 TSR1Q2NL82 804 aaKnown RBP16.74■□□□□ 0.27
MACF1-223ENST00000496360 CEP85LQ5SZL2 805 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 KLHDC4Q8TBB5 520 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 P3H4Q92791 437 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 ANGEL1Q9UNK9 670 aaKnown RBP16.74■□□□□ 0.27
MACF1-223ENST00000496360 MYO1FO00160 1098 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 TFRCP02786 760 aaKnown RBP16.74■□□□□ 0.27
MACF1-223ENST00000496360 EZRP15311 586 aaKnown RBP16.74■□□□□ 0.27
MACF1-223ENST00000496360 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.273e-8■■□□□ 13.7
MACF1-223ENST00000496360 ANTXR2P58335 489 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 C11orf91Q3C1V1 193 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 OR8K1Q8NGG5 319 aa16.74■□□□□ 0.27
MACF1-223ENST00000496360 N4BP2L2Q92802 583 aaPredicted RBP16.74■□□□□ 0.27
MACF1-223ENST00000496360 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
MACF1-223ENST00000496360 N4BP3O15049 544 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 ATP1A1P05023 1023 aaKnown RBP16.73■□□□□ 0.27
MACF1-223ENST00000496360 KRT9P35527 623 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 SKIDA1Q1XH10 827 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 SND1Q7KZF4 910 aaKnown RBP eCLIP16.73■□□□□ 0.27
MACF1-223ENST00000496360 CD302Q8IX05 232 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 TSGA10Q9BZW7 698 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 FOXP1Q9H334 677 aaPredicted RBP16.73■□□□□ 0.27
MACF1-223ENST00000496360 POLRMTO00411 1230 aaKnown RBP16.73■□□□□ 0.27
MACF1-223ENST00000496360 GRIN3BO60391 1043 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 CYLC1P35663 651 aaPredicted RBP16.73■□□□□ 0.27
MACF1-223ENST00000496360 IARSP41252 1262 aaKnown RBP16.73■□□□□ 0.27
MACF1-223ENST00000496360 ZKSCAN8Q15776 578 aaPredicted RBP16.73■□□□□ 0.27
MACF1-223ENST00000496360 SNCBQ16143 134 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 GLE1Q53GS7 698 aaKnown RBP16.73■□□□□ 0.27
MACF1-223ENST00000496360 CCDC122Q5T0U0 273 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 SH3RF1Q7Z6J0 888 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 DNAJC7Q99615 494 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 GJB4Q9NTQ9 266 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 SAMM50Q9Y512 469 aa16.73■□□□□ 0.27
MACF1-223ENST00000496360 ABCC12Q96J65 1359 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 A0A1W2PQC6 194 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 CHGBP05060 677 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 SLC8A3P57103 927 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 TGFB2P61812 414 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 NFIXQ14938 502 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 NAA35Q5VZE5 725 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 TMEM87BQ96K49 555 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 PYM1Q9BRP8 204 aaKnown RBP16.72■□□□□ 0.27
MACF1-223ENST00000496360 ATP6V0A4Q9HBG4 840 aa16.72■□□□□ 0.27
MACF1-223ENST00000496360 GPHNQ9NQX3 736 aaPredicted RBP16.72■□□□□ 0.27
MACF1-223ENST00000496360 AATFQ9NY61 560 aaKnown RBP eCLIP16.72■□□□□ 0.27
MACF1-223ENST00000496360 REXO2Q9Y3B8 237 aaKnown RBP16.72■□□□□ 0.27
MACF1-223ENST00000496360 CHD4Q14839 1912 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 MYBL2P10244 700 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 COPB1P53618 953 aaKnown RBP16.71■□□□□ 0.27
MACF1-223ENST00000496360 KRT31Q15323 416 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 NBPF20Q3BBV1 942 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 CCDC170Q8IYT3 715 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 FAXDC2Q96IV6 333 aa16.71■□□□□ 0.27
MACF1-223ENST00000496360 PURBQ96QR8 312 aaKnown RBP16.71■□□□□ 0.27
MACF1-223ENST00000496360 NDUFB9Q9Y6M9 179 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms