RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 DDX19AQ9NUU7 478 aaKnown RBP7.82□□□□□ -1.16
MSH5-217ENST00000494458 GPRC5DQ9NZD1 345 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 VPS54Q9P1Q0 977 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 PCDHA4Q9UN74 947 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 HPSEQ9Y251 543 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 TMX2Q9Y320 296 aa7.82□□□□□ -1.16
MSH5-217ENST00000494458 ZNF541Q9H0D2 1346 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 PNMA6FA0A0J9YX94 578 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 A0A1W2PRG0 241 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 CLRN2A0PK11 232 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 TCP10L2B9ZVM9 353 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 F5H6K3 240 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 ADAMTS3O15072 1205 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 KRT2P35908 639 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 CAP2P40123 477 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 TNNI2P48788 182 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 IRX5P78411 483 aaPredicted RBP7.81□□□□□ -1.16
MSH5-217ENST00000494458 KLRC3Q07444 240 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 TNFAIP1Q13829 316 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 RASA3Q14644 834 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 SHROOM1Q2M3G4 852 aaPredicted RBP7.81□□□□□ -1.16
MSH5-217ENST00000494458 RBM26Q5T8P6 1007 aaKnown RBP7.81□□□□□ -1.16
MSH5-217ENST00000494458 WWC2Q6AWC2 1192 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 PPP1R18Q6NYC8 613 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 MICALL2Q8IY33 904 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 FMR1NBQ8N0W7 255 aaPredicted RBP7.81□□□□□ -1.16
MSH5-217ENST00000494458 C4orf32Q8N8J7 132 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 TIGD1Q96MW7 591 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 TMEM39BQ9GZU3 492 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.81□□□□□ -1.16
MSH5-217ENST00000494458 PPP1R1BQ9UD71 204 aaPredicted RBP7.81□□□□□ -1.16
MSH5-217ENST00000494458 SRPRBQ9Y5M8 271 aaKnown RBP7.81□□□□□ -1.16
MSH5-217ENST00000494458 SBF1O95248 1867 aa7.81□□□□□ -1.16
MSH5-217ENST00000494458 GOLGB1Q14789 3259 aaKnown RBP7.81□□□□□ -1.16
MSH5-217ENST00000494458 PITPNM2Q9BZ72 1349 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 hCG_1642624A0A1W2PR95 340 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 FAM196BA6NMK8 535 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 ZBTB5O15062 677 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 EDIL3O43854 480 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 CUTAO60888 179 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 NR1I2O75469 434 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 BMP15O95972 392 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 GH2P01242 217 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 GOLGA8HP0CJ92 632 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 DEKP35659 375 aaKnown RBP7.8□□□□□ -1.16
MSH5-217ENST00000494458 CLK2P49760 499 aaKnown RBP7.8□□□□□ -1.16
MSH5-217ENST00000494458 MRE11P49959 708 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 FOSBP53539 338 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 HIRAP54198 1017 aaPredicted RBP7.8□□□□□ -1.16
MSH5-217ENST00000494458 ICA1Q05084 483 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 FAM160A1Q05DH4 1040 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 RESP18Q5W5W9 173 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 ILDR2Q71H61 639 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 RASGRP2Q7LDG7 609 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 SAMD7Q7Z3H4 446 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 CLEC10AQ8IUN9 316 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 ZSCAN29Q8IWY8 852 aaPredicted RBP7.8□□□□□ -1.16
MSH5-217ENST00000494458 ADGRF4Q8IZF3 695 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 BLIDQ8IZY5 108 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 JMYQ8N9B5 988 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 CCDC148Q8NFR7 591 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 CCDC12Q8WUD4 166 aaPredicted RBP7.8□□□□□ -1.16
MSH5-217ENST00000494458 RRP36Q96EU6 259 aaKnown RBP7.8□□□□□ -1.16
MSH5-217ENST00000494458 L3MBTL3Q96JM7 780 aaPredicted RBP7.8□□□□□ -1.16
MSH5-217ENST00000494458 PIGSQ96S52 555 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
MSH5-217ENST00000494458 DEFB129Q9H1M3 183 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 GOLPH3LQ9H4A5 285 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 CLSTN2Q9H4D0 955 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 CABP5Q9NP86 173 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 DACT1Q9NYF0 836 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 FBXO2Q9UK22 296 aaPredicted RBP7.8□□□□□ -1.16
MSH5-217ENST00000494458 ZBTB21Q9ULJ3 1066 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 PCDHA6Q9UN73 950 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 PCDHB6Q9Y5E3 794 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 PCDHA8Q9Y5H6 950 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 PPP2R3BQ9Y5P8 575 aa7.8□□□□□ -1.16
MSH5-217ENST00000494458 ZC3H4Q9UPT8 1303 aaKnown RBP7.79□□□□□ -1.16
MSH5-217ENST00000494458 GOLGA6L3A6NEY3 463 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 H7C1D1 291 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 WNT7AO00755 349 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 CTAGE5O15320 804 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 CTNND1O60716 968 aaKnown RBP7.79□□□□□ -1.16
MSH5-217ENST00000494458 PPP1R11O60927 126 aaPredicted RBP7.79□□□□□ -1.16
MSH5-217ENST00000494458 NDUFB10O96000 172 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 ASNSP08243 561 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 XRCC6P12956 609 aaKnown RBP eCLIP7.79□□□□□ -1.16
MSH5-217ENST00000494458 YBX3P16989 372 aaKnown RBP eCLIP7.79□□□□□ -1.16
MSH5-217ENST00000494458 GNA11P29992 359 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 NLRP5P59047 1200 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 ATP2C1P98194 919 aaPredicted RBP7.79□□□□□ -1.16
MSH5-217ENST00000494458 ORC2Q13416 577 aaPredicted RBP7.79□□□□□ -1.16
MSH5-217ENST00000494458 STK38Q15208 465 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 KIF4BQ2VIQ3 1234 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 ARL6IP4Q66PJ3 421 aaKnown RBP7.79□□□□□ -1.16
MSH5-217ENST00000494458 SLFN13Q68D06 897 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 TTBK2Q6IQ55 1244 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 SHC4Q6S5L8 630 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 ARHGAP27Q6ZUM4 889 aa7.79□□□□□ -1.16
MSH5-217ENST00000494458 CCAR1Q8IX12 1150 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms