RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 RAVER2Q9HCJ3 691 aaKnown RBP17.41■□□□□ 0.38
ATG4B-223ENST00000493618 CTDP1Q9Y5B0 961 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-223ENST00000493618 SZT2Q5T011 3432 aa17.41■□□□□ 0.38
ATG4B-223ENST00000493618 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
ATG4B-223ENST00000493618 SOX1O00570 391 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-223ENST00000493618 SEPT4O43236 478 aa17.4■□□□□ 0.38
ATG4B-223ENST00000493618 NMT2O60551 498 aa17.4■□□□□ 0.38
ATG4B-223ENST00000493618 ZBED4O75132 1171 aa17.4■□□□□ 0.38
ATG4B-223ENST00000493618 MAGEA10P43363 369 aaPredicted RBP17.4■□□□□ 0.38
ATG4B-223ENST00000493618 ZNF792Q3KQV3 632 aa17.4■□□□□ 0.38
ATG4B-223ENST00000493618 EXOC6Q8TAG9 804 aa17.4■□□□□ 0.38
ATG4B-223ENST00000493618 GDF15Q99988 308 aa17.4■□□□□ 0.38
ATG4B-223ENST00000493618 TEX13BQ9BXU2 312 aa17.4■□□□□ 0.38
ATG4B-223ENST00000493618 LTBP2Q14767 1821 aa17.4■□□□□ 0.38
ATG4B-223ENST00000493618 TSPY2A6NKD2 308 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 DNM1LO00429 736 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 IGHDP01880 384 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 BMP3P12645 472 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 TAL1P17542 331 aaPredicted RBP17.39■□□□□ 0.37
ATG4B-223ENST00000493618 COPB2P35606 906 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 RASGRP2Q7LDG7 609 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 GMCL1P1Q8NEA9 526 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 RILPL2Q969X0 211 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 TINF2Q9BSI4 451 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 HELLSQ9NRZ9 838 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 FEM1BQ9UK73 627 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 MTMR7Q9Y216 660 aa17.39■□□□□ 0.37
ATG4B-223ENST00000493618 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.39■□□□□ 0.37
ATG4B-223ENST00000493618 TMEM232C9JQI7 657 aa17.38■□□□□ 0.37
ATG4B-223ENST00000493618 RANBP6O60518 1105 aaKnown RBP17.38■□□□□ 0.37
ATG4B-223ENST00000493618 NMIQ13287 307 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-223ENST00000493618 ARRDC4Q8NCT1 418 aa17.38■□□□□ 0.37
ATG4B-223ENST00000493618 LENG1Q96BZ8 264 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-223ENST00000493618 RWDD1Q9H446 243 aaPredicted RBP17.38■□□□□ 0.37
ATG4B-223ENST00000493618 STX8Q9UNK0 236 aa17.38■□□□□ 0.37
ATG4B-223ENST00000493618 LAMA4Q16363 1823 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 KBTBD13C9JR72 458 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 MCCP23508 829 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 RTP1P59025 263 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 MDM2Q00987 491 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-223ENST00000493618 IKQ13123 557 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-223ENST00000493618 MCMDC2Q4G0Z9 681 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 ZNF589Q86UQ0 364 aaPredicted RBP17.37■□□□□ 0.37
ATG4B-223ENST00000493618 FERMT2Q96AC1 680 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 DDX11Q96FC9 970 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 LRCH3Q96II8 777 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 SLC38A10Q9HBR0 1119 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 IL17RBQ9NRM6 502 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 TOMM22Q9NS69 142 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 HOMER2Q9NSB8 354 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 ATP11BQ9Y2G3 1177 aa17.37■□□□□ 0.37
ATG4B-223ENST00000493618 A0A1W2PPC1 479 aa17.36■□□□□ 0.37
ATG4B-223ENST00000493618 BMP8BP34820 402 aa17.36■□□□□ 0.37
ATG4B-223ENST00000493618 ADCYAP1R1P41586 468 aa17.36■□□□□ 0.37
ATG4B-223ENST00000493618 SNAP25P60880 206 aa17.36■□□□□ 0.37
ATG4B-223ENST00000493618 LRRC41Q15345 812 aa17.36■□□□□ 0.37
ATG4B-223ENST00000493618 RRP12Q5JTH9 1297 aaKnown RBP17.36■□□□□ 0.37
ATG4B-223ENST00000493618 KCTD1Q719H9 257 aa17.36■□□□□ 0.37
ATG4B-223ENST00000493618 SMC5Q8IY18 1101 aa17.36■□□□□ 0.37
ATG4B-223ENST00000493618 UBE2OQ9C0C9 1292 aaKnown RBP17.36■□□□□ 0.37
ATG4B-223ENST00000493618 ANAPC4Q9UJX5 808 aa17.36■□□□□ 0.37
ATG4B-223ENST00000493618 SYNPO2Q9UMS6 1093 aa17.36■□□□□ 0.37
ATG4B-223ENST00000493618 DIS3Q9Y2L1 958 aaKnown RBP17.36■□□□□ 0.37
ATG4B-223ENST00000493618 LCTP09848 1927 aa17.35■□□□□ 0.37
ATG4B-223ENST00000493618 FGAP02671 866 aa17.35■□□□□ 0.37
ATG4B-223ENST00000493618 ZNF865P0CJ78 1059 aaPredicted RBP17.35■□□□□ 0.37
ATG4B-223ENST00000493618 SLC1A4P43007 532 aa17.35■□□□□ 0.37
ATG4B-223ENST00000493618 HAND2P61296 217 aa17.35■□□□□ 0.37
ATG4B-223ENST00000493618 CHD1LQ86WJ1 897 aa17.35■□□□□ 0.37
ATG4B-223ENST00000493618 XPNPEP3Q9NQH7 507 aa17.35■□□□□ 0.37
ATG4B-223ENST00000493618 DNAJC25-GNG10A0A024R161 153 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 LRRC37A2A6NM11 1700 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 ATP2A1O14983 1001 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 PGK1P00558 417 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 HSPD1P10809 573 aaKnown RBP17.34■□□□□ 0.37
ATG4B-223ENST00000493618 RARBP10826 455 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 STAT2P52630 851 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 AAMPQ13685 434 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 ALX1Q15699 326 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 CCDC174Q6PII3 467 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 SLC39A5Q6ZMH5 540 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 PLEKHM2Q8IWE5 1019 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 ANKRD35Q8N283 1001 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 STAG1Q8WVM7 1258 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 GMCL1Q96IK5 515 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 AGBL1Q96MI9 1066 aa17.34■□□□□ 0.37
ATG4B-223ENST00000493618 CCDC171Q6TFL3 1326 aa17.33■□□□□ 0.36
ATG4B-223ENST00000493618 SNAI1O95863 264 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-223ENST00000493618 NUCB1Q02818 461 aa17.33■□□□□ 0.36
ATG4B-223ENST00000493618 TRIM60Q495X7 471 aa17.33■□□□□ 0.36
ATG4B-223ENST00000493618 NRBP1Q9UHY1 535 aa17.33■□□□□ 0.36
ATG4B-223ENST00000493618 ZHX1Q9UKY1 873 aaPredicted RBP17.33■□□□□ 0.36
ATG4B-223ENST00000493618 CNPY2Q9Y2B0 182 aa17.33■□□□□ 0.36
ATG4B-223ENST00000493618 ZNF536O15090 1300 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 ORC4O43929 436 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 AKR1A1P14550 325 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 SDSP20132 328 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 OAZ1P54368 228 aa17.32■□□□□ 0.36
ATG4B-223ENST00000493618 CCDC96Q2M329 555 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms