RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 PSME4Q14997 1843 aa8.61□□□□□ -1.03
KPNA1-209ENST00000493510 EP300Q09472 2414 aaPredicted RBP8.61□□□□□ -1.03
KPNA1-209ENST00000493510 RPS8P62241 208 aaKnown RBP8.61□□□□□ -1.03
KPNA1-209ENST00000493510 TTLL5Q6EMB2 1281 aa8.61□□□□□ -1.03
KPNA1-209ENST00000493510 PHLDB3Q6NSJ2 640 aa8.61□□□□□ -1.03
KPNA1-209ENST00000493510 LRSAM1Q6UWE0 723 aa8.61□□□□□ -1.03
KPNA1-209ENST00000493510 ZNF365Q70YC5 407 aa8.61□□□□□ -1.03
KPNA1-209ENST00000493510 C16orf59Q7L2K0 433 aa8.61□□□□□ -1.03
KPNA1-209ENST00000493510 FASTKD5Q7L8L6 764 aaKnown RBP8.61□□□□□ -1.03
KPNA1-209ENST00000493510 SLC44A5Q8NCS7 719 aa8.61□□□□□ -1.03
KPNA1-209ENST00000493510 TEPSINQ96N21 525 aa8.61□□□□□ -1.03
KPNA1-209ENST00000493510 DDX20Q9UHI6 824 aaKnown RBP8.61□□□□□ -1.03
KPNA1-209ENST00000493510 BRPF3Q9ULD4 1205 aa8.61□□□□□ -1.03
KPNA1-209ENST00000493510 LAS1LQ9Y4W2 734 aaKnown RBP8.61□□□□□ -1.03
KPNA1-209ENST00000493510 WDR87Q6ZQQ6 2873 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 CEP250Q9BV73 2442 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 BTBD11A6QL63 1104 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 ESPNB1AK53 854 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 GTF2IP78347 998 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 KCNC4Q03721 635 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 NFKBIBQ15653 356 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 CFAP100Q494V2 611 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 GJC2Q5T442 439 aaPredicted RBP8.6□□□□□ -1.03
KPNA1-209ENST00000493510 MFSD5Q6N075 450 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 KCNG4Q8TDN1 519 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 SOCS4Q8WXH5 440 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 CLP1Q92989 425 aaKnown RBP8.6□□□□□ -1.03
KPNA1-209ENST00000493510 HOOK2Q96ED9 719 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 PRMT6Q96LA8 375 aaPredicted RBP8.6□□□□□ -1.03
KPNA1-209ENST00000493510 LMCD1Q9NZU5 365 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 CDV3Q9UKY7 258 aaKnown RBP8.6□□□□□ -1.03
KPNA1-209ENST00000493510 DAGLAQ9Y4D2 1042 aa8.6□□□□□ -1.03
KPNA1-209ENST00000493510 ANKRD36CQ5JPF3 1778 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 CXCL11O14625 94 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 KCNQ3O43525 872 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 TIMP1P01033 207 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 ATP2B4P23634 1241 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 ARID4AP29374 1257 aaPredicted RBP8.59□□□□□ -1.03
KPNA1-209ENST00000493510 TNNI2P48788 182 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 RABGGTBP53611 331 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 USP4Q13107 963 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 TTLL7Q6ZT98 887 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 SND1Q7KZF4 910 aaKnown RBP eCLIP8.59□□□□□ -1.03
KPNA1-209ENST00000493510 PNISRQ8TF01 805 aaKnown RBP8.59□□□□□ -1.03
KPNA1-209ENST00000493510 PKNOX2Q96KN3 472 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 COA1Q9GZY4 146 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 CERS4Q9HA82 394 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 KIAA1024Q9UPX6 916 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 PCDHB11Q9Y5F2 797 aa8.59□□□□□ -1.03
KPNA1-209ENST00000493510 EPOPA6NHQ4 379 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 RNF223E7ERA6 249 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 KRT38O76015 456 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 DKK1O94907 266 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 GRB10Q13322 594 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 SWI5Q1ZZU3 235 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 MTHFSDQ2M296 383 aaKnown RBP8.58□□□□□ -1.04
KPNA1-209ENST00000493510 CCDC102BQ68D86 513 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 SIX5Q8N196 739 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 TMEM199Q8N511 208 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 ARNTL2Q8WYA1 636 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 L3MBTL2Q969R5 705 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 ANKFY1Q9P2R3 1169 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 TRMT112Q9UI30 125 aaKnown RBP8.58□□□□□ -1.04
KPNA1-209ENST00000493510 PCDHAC2Q9Y5I4 1007 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 COL4A1P02462 1669 aa8.58□□□□□ -1.04
KPNA1-209ENST00000493510 KMT2EQ8IZD2 1858 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 TRIOO75962 3097 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 XDHP47989 1333 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 KIF20BQ96Q89 1820 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 LMNAP02545 664 aaKnown RBP8.57□□□□□ -1.04
KPNA1-209ENST00000493510 MYOGP15173 224 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 CNGA1P29973 690 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 ADCYAP1R1P41586 468 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 RBM5P52756 815 aaKnown RBP eCLIP8.57□□□□□ -1.04
KPNA1-209ENST00000493510 ATXN1P54253 815 aaKnown RBP8.57□□□□□ -1.04
KPNA1-209ENST00000493510 SEC13P55735 322 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 RAB15P59190 212 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 ZXDAP98168 799 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 SIGLEC14Q08ET2 396 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 SF3B3Q15393 1217 aaKnown RBP8.57□□□□□ -1.04
KPNA1-209ENST00000493510 CCDC27Q2M243 656 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 SPNS2Q8IVW8 549 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 KCTD15Q96SI1 283 aaPredicted RBP8.57□□□□□ -1.04
KPNA1-209ENST00000493510 HINFPQ9BQA5 517 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 TMEM39BQ9GZU3 492 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 SEMA4AQ9H3S1 761 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 HCSTQ9UBK5 93 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 RCAN3Q9UKA8 241 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 PCDHGA11Q9Y5H2 935 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 ZNF462Q96JM2 2506 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 VPS13AQ96RL7 3174 aa8.57□□□□□ -1.04
KPNA1-209ENST00000493510 HELZ2Q9BYK8 2649 aaKnown RBP8.56□□□□□ -1.04
KPNA1-209ENST00000493510 DCDC2CA8MYV0 355 aa8.56□□□□□ -1.04
KPNA1-209ENST00000493510 PQBP1O60828 265 aaKnown RBP8.56□□□□□ -1.04
KPNA1-209ENST00000493510 ACRP10323 421 aa8.56□□□□□ -1.04
KPNA1-209ENST00000493510 CSF2RAP15509 400 aa8.56□□□□□ -1.04
KPNA1-209ENST00000493510 VARSP26640 1264 aaKnown RBP8.56□□□□□ -1.04
KPNA1-209ENST00000493510 GGCXP38435 758 aa8.56□□□□□ -1.04
KPNA1-209ENST00000493510 RALBP1Q15311 655 aa8.56□□□□□ -1.04
KPNA1-209ENST00000493510 TMEM67Q5HYA8 995 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms