RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 FAAP100Q0VG06 881 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 TJAP1Q5JTD0 557 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 MFSD5Q6N075 450 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 CLEC10AQ8IUN9 316 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 PRPF38AQ8NAV1 312 aaKnown RBP13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 KLHDC9Q8NEP7 349 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 DDX11Q96FC9 970 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 HAUS7Q99871 368 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 SLF1Q9BQI6 1058 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 FBXO28Q9NVF7 368 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 FBXO40Q9UH90 709 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 SYNPO2Q9UMS6 1093 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 PLXNA1Q9UIW2 1896 aa13.2□□□□□ -0.3
SNRNP200-207ENST00000493271 ZNFX1Q9P2E3 1918 aaKnown RBP13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 COL11A1P12107 1806 aaPredicted RBP13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 DNAJC25-GNG10A0A024R161 153 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 PRKAB2O43741 272 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 TAL1P17542 331 aaPredicted RBP13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 EPHB4P54760 987 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 PPIGQ13427 754 aaKnown RBP eCLIP13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 FAM83BQ5T0W9 1011 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 CCSAPQ6IQ19 270 aaPredicted RBP13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 GIMAP6Q6P9H5 292 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 SEZ6LQ9BYH1 1024 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 ABHD16BQ9H3Z7 469 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 ZNF576Q9H609 170 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 NYAP2Q9P242 653 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 TBX21Q9UL17 535 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
SNRNP200-207ENST00000493271 TLR3O15455 904 aaKnown RBP13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 ZBED4O75132 1171 aa13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 FDX1P10109 184 aa13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 OAZ1P54368 228 aa13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 GRIN2CQ14957 1233 aa13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 SBK1Q52WX2 424 aa13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 SNRNP48Q6IEG0 339 aaKnown RBP13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 PSRC1Q6PGN9 363 aaPredicted RBP13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 TMEM199Q8N511 208 aa13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 GAS2L1Q99501 681 aaPredicted RBP13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 BOLA2Q9H3K6 86 aa13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 DDX19BQ9UMR2 479 aa13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 CTDP1Q9Y5B0 961 aaPredicted RBP13.18□□□□□ -0.3
SNRNP200-207ENST00000493271 SMCHD1A6NHR9 2005 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 F5H6K3 240 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 RAD21O60216 631 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 SNAI1O95863 264 aaPredicted RBP13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 CDK7P50613 346 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 GJA9P57773 515 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 KLRC3Q07444 240 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 ACVR2BQ13705 512 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 KCNA10Q16322 511 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 AKNAD1Q5T1N1 836 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 CHST13Q8NET6 341 aa13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.17□□□□□ -0.33e-8■■■■■ 39.5
SNRNP200-207ENST00000493271 UPF3AQ9H1J1 476 aaKnown RBP13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 ZHX1Q9UKY1 873 aaPredicted RBP13.17□□□□□ -0.3
SNRNP200-207ENST00000493271 BAZ2AQ9UIF9 1905 aaKnown RBP13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 CYP2D7A0A087X1C5 515 aa13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 C6orf222P0C671 652 aaPredicted RBP13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 NKX3-2P78367 333 aa13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 RAB30Q15771 203 aa13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 RASIP1Q5U651 963 aa13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 PANK1Q8TE04 598 aa13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 MKNK2Q9HBH9 465 aa13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
SNRNP200-207ENST00000493271 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 TTC28Q96AY4 2481 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 ARVCFO00192 962 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 APBB1O00213 710 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 TNFRSF10AO00220 468 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 CABYRO75952 493 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 NDUFB10O96000 172 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 ASGR1P07306 291 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 RASA1P20936 1047 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 HNRNPUQ00839 825 aaKnown RBP eCLIP13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 CCDC129Q6ZRS4 1044 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 ANKRD35Q8N283 1001 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 MKL1Q969V6 931 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 LENG1Q96BZ8 264 aaPredicted RBP13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 SLC38A10Q9HBR0 1119 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 ZBTB40Q9NUA8 1239 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 FEM1BQ9UK73 627 aa13.15□□□□□ -0.3
SNRNP200-207ENST00000493271 GNAT2P19087 354 aa13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 CCDC144BQ3MJ40 725 aa13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 GNASQ5JWF2 1037 aa13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 TMEM240Q5SV17 173 aa13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 FAM126BQ8IXS8 530 aa13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 VTI1AQ96AJ9 217 aa13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 PBX4Q9BYU1 374 aa13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 PUS7LQ9H0K6 701 aaKnown RBP13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 THEGQ9P2T0 379 aa13.14□□□□□ -0.31
SNRNP200-207ENST00000493271 MSRAQ9UJ68 235 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms