RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 VWA5AO00534 786 aa15.79■□□□□ 0.12
HDAC3-213ENST00000492506 PRKAB2O43741 272 aa15.79■□□□□ 0.12
HDAC3-213ENST00000492506 TIMP1P01033 207 aa15.79■□□□□ 0.12
HDAC3-213ENST00000492506 STAT3P40763 770 aa15.79■□□□□ 0.12
HDAC3-213ENST00000492506 IRX6P78412 446 aaPredicted RBP15.79■□□□□ 0.12
HDAC3-213ENST00000492506 KCTD2Q14681 263 aa15.79■□□□□ 0.12
HDAC3-213ENST00000492506 RASIP1Q5U651 963 aa15.79■□□□□ 0.12
HDAC3-213ENST00000492506 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
HDAC3-213ENST00000492506 TIFAQ96CG3 184 aa15.79■□□□□ 0.12
HDAC3-213ENST00000492506 SH2D4AQ9H788 454 aa15.79■□□□□ 0.12
HDAC3-213ENST00000492506 CYP2D7A0A087X1C5 515 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 DCDC2CA8MYV0 355 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 SNAI1O95863 264 aaPredicted RBP15.78■□□□□ 0.12
HDAC3-213ENST00000492506 EEF2P13639 858 aaKnown RBP15.78■□□□□ 0.12
HDAC3-213ENST00000492506 COL9A1P20849 921 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 PBX2P40425 430 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 CDK7P50613 346 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 SLFNL1Q499Z3 407 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 ERC1Q8IUD2 1116 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 CCDC17Q96LX7 622 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 ARMT1Q9H993 441 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 IL1RAPL2Q9NP60 686 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 STARD7Q9NQZ5 370 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 PPP1R9AQ9ULJ8 1098 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 MYH4Q9Y623 1939 aa15.78■□□□□ 0.12
HDAC3-213ENST00000492506 MYADML2A6NDP7 307 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 MOXD2PA6NHM9 499 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 GRXCR1A8MXD5 290 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 GOLIM4O00461 696 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 RRP9O43818 475 aaKnown RBP15.77■□□□□ 0.12
HDAC3-213ENST00000492506 CDK8P49336 464 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 IRX5P78411 483 aaPredicted RBP15.77■□□□□ 0.12
HDAC3-213ENST00000492506 KCNA10Q16322 511 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 TMEM240Q5SV17 173 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 C12orf60Q5U649 245 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 MFSD5Q6N075 450 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.77■□□□□ 0.12
HDAC3-213ENST00000492506 PBX4Q9BYU1 374 aa15.77■□□□□ 0.12
HDAC3-213ENST00000492506 DNAJC25-GNG10A0A024R161 153 aa15.76■□□□□ 0.11
HDAC3-213ENST00000492506 ADCY6O43306 1168 aa15.76■□□□□ 0.11
HDAC3-213ENST00000492506 MAMDC4Q6UXC1 1216 aa15.76■□□□□ 0.11
HDAC3-213ENST00000492506 C16orf86Q6ZW13 317 aa15.76■□□□□ 0.11
HDAC3-213ENST00000492506 ITPRIPQ8IWB1 547 aa15.76■□□□□ 0.11
HDAC3-213ENST00000492506 MSL3Q8N5Y2 521 aaKnown RBP15.76■□□□□ 0.11
HDAC3-213ENST00000492506 RHPN1Q8TCX5 695 aa15.76■□□□□ 0.11
HDAC3-213ENST00000492506 NUP133Q8WUM0 1156 aa15.76■□□□□ 0.11
HDAC3-213ENST00000492506 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.76■□□□□ 0.11
HDAC3-213ENST00000492506 ATP8A2Q9NTI2 1148 aa15.76■□□□□ 0.11
HDAC3-213ENST00000492506 CNPY2Q9Y2B0 182 aa15.76■□□□□ 0.11
HDAC3-213ENST00000492506 ELP1O95163 1332 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 SYNGAP1Q96PV0 1343 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 TCF20Q9UGU0 1960 aaKnown RBP15.75■□□□□ 0.11
HDAC3-213ENST00000492506 DUSP11O75319 330 aaKnown RBP15.75■□□□□ 0.11
HDAC3-213ENST00000492506 CST5P28325 142 aaPredicted RBP15.75■□□□□ 0.11
HDAC3-213ENST00000492506 COPB2P35606 906 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 ADGRE1Q14246 886 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 FAM83BQ5T0W9 1011 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 AKNAD1Q5T1N1 836 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 ATXN2LQ8WWM7 1075 aaKnown RBP15.75■□□□□ 0.11
HDAC3-213ENST00000492506 KANSL2Q9H9L4 492 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 RAPGEFL1Q9UHV5 662 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 FAM184BQ9ULE4 1060 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 RIPK3Q9Y572 518 aa15.75■□□□□ 0.11
HDAC3-213ENST00000492506 USP17L12C9JPN9 530 aa15.74■□□□□ 0.11
HDAC3-213ENST00000492506 USP17L21D6R901 530 aa15.74■□□□□ 0.11
HDAC3-213ENST00000492506 MBD4O95243 580 aa15.74■□□□□ 0.11
HDAC3-213ENST00000492506 CHGBP05060 677 aa15.74■□□□□ 0.11
HDAC3-213ENST00000492506 CSF2RAP15509 400 aa15.74■□□□□ 0.11
HDAC3-213ENST00000492506 ADD2P35612 726 aa15.74■□□□□ 0.11
HDAC3-213ENST00000492506 FTSJ3Q8IY81 847 aaKnown RBP15.74■□□□□ 0.11
HDAC3-213ENST00000492506 FGD4Q96M96 766 aa15.74■□□□□ 0.11
HDAC3-213ENST00000492506 ASB2Q96Q27 587 aa15.74■□□□□ 0.11
HDAC3-213ENST00000492506 DNAJC2Q99543 621 aaKnown RBP15.74■□□□□ 0.11
HDAC3-213ENST00000492506 PRDM12Q9H4Q4 367 aa15.74■□□□□ 0.11
HDAC3-213ENST00000492506 MROH7Q68CQ1 1323 aa15.73■□□□□ 0.11
HDAC3-213ENST00000492506 CTAGE5O15320 804 aa15.73■□□□□ 0.11
HDAC3-213ENST00000492506 PPIGQ13427 754 aaKnown RBP eCLIP15.73■□□□□ 0.11
HDAC3-213ENST00000492506 ZNF365Q70YC5 407 aa15.73■□□□□ 0.11
HDAC3-213ENST00000492506 ZNF467Q7Z7K2 595 aaPredicted RBP15.73■□□□□ 0.11
HDAC3-213ENST00000492506 FAM126BQ8IXS8 530 aa15.73■□□□□ 0.11
HDAC3-213ENST00000492506 PPM1EQ8WY54 764 aa15.73■□□□□ 0.11
HDAC3-213ENST00000492506 GLT1D1Q96MS3 346 aa15.73■□□□□ 0.11
HDAC3-213ENST00000492506 NUP88Q99567 741 aaPredicted RBP15.73■□□□□ 0.11
HDAC3-213ENST00000492506 TEX13BQ9BXU2 312 aa15.73■□□□□ 0.11
HDAC3-213ENST00000492506 UPF3AQ9H1J1 476 aaKnown RBP15.73■□□□□ 0.11
HDAC3-213ENST00000492506 GOPCQ9HD26 462 aa15.73■□□□□ 0.11
HDAC3-213ENST00000492506 ASGR1P07306 291 aa15.72■□□□□ 0.11
HDAC3-213ENST00000492506 ACRP10323 421 aa15.72■□□□□ 0.11
HDAC3-213ENST00000492506 GJA9P57773 515 aa15.72■□□□□ 0.11
HDAC3-213ENST00000492506 ACVR2BQ13705 512 aa15.72■□□□□ 0.11
HDAC3-213ENST00000492506 SNRNP48Q6IEG0 339 aaKnown RBP15.72■□□□□ 0.11
HDAC3-213ENST00000492506 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.72■□□□□ 0.11
HDAC3-213ENST00000492506 GAS2L1Q99501 681 aaPredicted RBP15.72■□□□□ 0.11
HDAC3-213ENST00000492506 SLF1Q9BQI6 1058 aa15.72■□□□□ 0.11
HDAC3-213ENST00000492506 THEGQ9P2T0 379 aa15.72■□□□□ 0.11
HDAC3-213ENST00000492506 ZHX1Q9UKY1 873 aaPredicted RBP15.72■□□□□ 0.11
HDAC3-213ENST00000492506 LRRC37A2A6NM11 1700 aa15.71■□□□□ 0.11
HDAC3-213ENST00000492506 ARVCFO00192 962 aa15.71■□□□□ 0.11
HDAC3-213ENST00000492506 ATP2A1O14983 1001 aa15.71■□□□□ 0.11
HDAC3-213ENST00000492506 CD4P01730 458 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms