RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 FEM1BQ9UK73 627 aa21.85■■□□□ 1.09
SMIM4-205ENST00000491607 SYNPO2Q9UMS6 1093 aa21.85■■□□□ 1.09
SMIM4-205ENST00000491607 PLIN4Q96Q06 1357 aa21.85■■□□□ 1.09
SMIM4-205ENST00000491607 PDE1AP54750 535 aa21.84■■□□□ 1.09
SMIM4-205ENST00000491607 MDM2Q00987 491 aaPredicted RBP21.84■■□□□ 1.09
SMIM4-205ENST00000491607 SLFN13Q68D06 897 aa21.84■■□□□ 1.09
SMIM4-205ENST00000491607 DDX11Q96FC9 970 aa21.84■■□□□ 1.09
SMIM4-205ENST00000491607 RAVER2Q9HCJ3 691 aaKnown RBP21.84■■□□□ 1.09
SMIM4-205ENST00000491607 NRBP1Q9UHY1 535 aa21.84■■□□□ 1.09
SMIM4-205ENST00000491607 DIS3Q9Y2L1 958 aaKnown RBP21.84■■□□□ 1.09
SMIM4-205ENST00000491607 RIPK3Q9Y572 518 aa21.84■■□□□ 1.09
SMIM4-205ENST00000491607 RARBP10826 455 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 BMP3P12645 472 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 RTP1P59025 263 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 CTDSPL2Q05D32 466 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 TDHQ8IZJ6 230 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 CHMP4CQ96CF2 233 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 XPNPEP3Q9NQH7 507 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 PRKAG2Q9UGJ0 569 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 CNPY2Q9Y2B0 182 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 ATP11BQ9Y2G3 1177 aa21.83■■□□□ 1.09
SMIM4-205ENST00000491607 MYH4Q9Y623 1939 aa21.82■■□□□ 1.08
SMIM4-205ENST00000491607 TSPY2A6NKD2 308 aa21.82■■□□□ 1.08
SMIM4-205ENST00000491607 FOXP2O15409 715 aa21.82■■□□□ 1.08
SMIM4-205ENST00000491607 TAL1P17542 331 aaPredicted RBP21.82■■□□□ 1.08
SMIM4-205ENST00000491607 IKQ13123 557 aaPredicted RBP21.82■■□□□ 1.08
SMIM4-205ENST00000491607 LRRC41Q15345 812 aa21.82■■□□□ 1.08
SMIM4-205ENST00000491607 VPS53Q5VIR6 699 aa21.82■■□□□ 1.08
SMIM4-205ENST00000491607 LBHD1Q9BQE6 289 aaPredicted RBP21.82■■□□□ 1.08
SMIM4-205ENST00000491607 SLC38A10Q9HBR0 1119 aa21.82■■□□□ 1.08
SMIM4-205ENST00000491607 STX8Q9UNK0 236 aa21.82■■□□□ 1.08
SMIM4-205ENST00000491607 TMEM232C9JQI7 657 aa21.81■■□□□ 1.08
SMIM4-205ENST00000491607 ATP2A1O14983 1001 aa21.81■■□□□ 1.08
SMIM4-205ENST00000491607 ADCYAP1R1P41586 468 aa21.81■■□□□ 1.08
SMIM4-205ENST00000491607 SLC39A5Q6ZMH5 540 aa21.81■■□□□ 1.08
SMIM4-205ENST00000491607 FERMT2Q96AC1 680 aa21.81■■□□□ 1.08
SMIM4-205ENST00000491607 INCENPQ9NQS7 918 aa21.81■■□□□ 1.08
SMIM4-205ENST00000491607 HELLSQ9NRZ9 838 aa21.81■■□□□ 1.08
SMIM4-205ENST00000491607 SLC1A4P43007 532 aa21.8■■□□□ 1.08
SMIM4-205ENST00000491607 STAT2P52630 851 aa21.8■■□□□ 1.08
SMIM4-205ENST00000491607 PPP4R3BQ5MIZ7 849 aa21.8■■□□□ 1.08
SMIM4-205ENST00000491607 ANKRD35Q8N283 1001 aa21.8■■□□□ 1.08
SMIM4-205ENST00000491607 LNPKQ9C0E8 428 aa21.8■■□□□ 1.08
SMIM4-205ENST00000491607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.8■■□□□ 1.08
SMIM4-205ENST00000491607 LAMA3Q16787 3333 aa21.8■■□□□ 1.08
SMIM4-205ENST00000491607 TRIM6-TRIM34B2RNG4 842 aa21.79■■□□□ 1.08
SMIM4-205ENST00000491607 RANBP6O60518 1105 aaKnown RBP21.79■■□□□ 1.08
SMIM4-205ENST00000491607 PGK1P00558 417 aa21.79■■□□□ 1.08
SMIM4-205ENST00000491607 ZNF865P0CJ78 1059 aaPredicted RBP21.79■■□□□ 1.08
SMIM4-205ENST00000491607 AKR1A1P14550 325 aa21.79■■□□□ 1.08
SMIM4-205ENST00000491607 B4GALNT3Q6L9W6 998 aa21.79■■□□□ 1.08
SMIM4-205ENST00000491607 RNF180Q86T96 592 aa21.79■■□□□ 1.08
SMIM4-205ENST00000491607 FAM227BQ96M60 508 aa21.79■■□□□ 1.08
SMIM4-205ENST00000491607 PRDM5Q9NQX1 630 aaPredicted RBP21.79■■□□□ 1.08
SMIM4-205ENST00000491607 HOMER2Q9NSB8 354 aa21.79■■□□□ 1.08
SMIM4-205ENST00000491607 PLXNA1Q9UIW2 1896 aa21.79■■□□□ 1.08
SMIM4-205ENST00000491607 ZNFX1Q9P2E3 1918 aaKnown RBP21.78■■□□□ 1.08
SMIM4-205ENST00000491607 NMT2O60551 498 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 MCCP23508 829 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 OAZ1P54368 228 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 LRIT3Q3SXY7 679 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 TRIM60Q495X7 471 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 MSL3Q8N5Y2 521 aaKnown RBP21.78■■□□□ 1.08
SMIM4-205ENST00000491607 LENG1Q96BZ8 264 aaPredicted RBP21.78■■□□□ 1.08
SMIM4-205ENST00000491607 GMCL1Q96IK5 515 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 IL17RBQ9NRM6 502 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 TOMM22Q9NS69 142 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 FBXO40Q9UH90 709 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 ZHX1Q9UKY1 873 aaPredicted RBP21.78■■□□□ 1.08
SMIM4-205ENST00000491607 MTMR7Q9Y216 660 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 SYNGAP1Q96PV0 1343 aa21.78■■□□□ 1.08
SMIM4-205ENST00000491607 DNAJC25-GNG10A0A024R161 153 aa21.77■■□□□ 1.08
SMIM4-205ENST00000491607 A0A0D9SFI3 127 aa21.77■■□□□ 1.08
SMIM4-205ENST00000491607 AAMPQ13685 434 aa21.77■■□□□ 1.08
SMIM4-205ENST00000491607 MCMDC2Q4G0Z9 681 aa21.77■■□□□ 1.08
SMIM4-205ENST00000491607 KCTD1Q719H9 257 aa21.77■■□□□ 1.08
SMIM4-205ENST00000491607 FAM160B2Q86V87 743 aa21.77■■□□□ 1.08
SMIM4-205ENST00000491607 CHST13Q8NET6 341 aa21.77■■□□□ 1.08
SMIM4-205ENST00000491607 CHURC1Q8WUH1 139 aa21.77■■□□□ 1.08
SMIM4-205ENST00000491607 RWDD1Q9H446 243 aaPredicted RBP21.77■■□□□ 1.08
SMIM4-205ENST00000491607 ANAPC4Q9UJX5 808 aa21.77■■□□□ 1.08
SMIM4-205ENST00000491607 FDX1P10109 184 aa21.76■■□□□ 1.07
SMIM4-205ENST00000491607 MAMDC4Q6UXC1 1216 aa21.76■■□□□ 1.07
SMIM4-205ENST00000491607 STAG1Q8WVM7 1258 aa21.76■■□□□ 1.07
SMIM4-205ENST00000491607 RILPL2Q969X0 211 aa21.76■■□□□ 1.07
SMIM4-205ENST00000491607 FAM184BQ9ULE4 1060 aa21.76■■□□□ 1.07
SMIM4-205ENST00000491607 PHF24Q9UPV7 400 aa21.76■■□□□ 1.07
SMIM4-205ENST00000491607 SNAI1O95863 264 aaPredicted RBP21.75■■□□□ 1.07
SMIM4-205ENST00000491607 NMIQ13287 307 aaPredicted RBP21.75■■□□□ 1.07
SMIM4-205ENST00000491607 SNX17Q15036 470 aa21.75■■□□□ 1.07
SMIM4-205ENST00000491607 RRP12Q5JTH9 1297 aaKnown RBP21.75■■□□□ 1.07
SMIM4-205ENST00000491607 ZNF467Q7Z7K2 595 aaPredicted RBP21.75■■□□□ 1.07
SMIM4-205ENST00000491607 TACC3Q9Y6A5 838 aa21.75■■□□□ 1.07
SMIM4-205ENST00000491607 DNAH12Q6ZR08 3092 aa21.75■■□□□ 1.07
SMIM4-205ENST00000491607 ORC4O43929 436 aa21.74■■□□□ 1.07
SMIM4-205ENST00000491607 FGAP02671 866 aa21.74■■□□□ 1.07
SMIM4-205ENST00000491607 ALX1Q15699 326 aa21.74■■□□□ 1.07
SMIM4-205ENST00000491607 RCSD1Q6JBY9 416 aa21.74■■□□□ 1.07
SMIM4-205ENST00000491607 RASGRP2Q7LDG7 609 aa21.74■■□□□ 1.07
SMIM4-205ENST00000491607 AGBL1Q96MI9 1066 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms