RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 IGKV6D-41A0A0C4DH26 115 aa23.44■■□□□ 1.34
SREBF1-216ENST00000490796 PPARAQ07869 468 aa23.44■■□□□ 1.34
SREBF1-216ENST00000490796 LRIT3Q3SXY7 679 aa23.44■■□□□ 1.34
SREBF1-216ENST00000490796 PPP4R3BQ5MIZ7 849 aa23.44■■□□□ 1.34
SREBF1-216ENST00000490796 SLC39A5Q6ZMH5 540 aa23.44■■□□□ 1.34
SREBF1-216ENST00000490796 RNF180Q86T96 592 aa23.44■■□□□ 1.34
SREBF1-216ENST00000490796 MKL1Q969V6 931 aa23.44■■□□□ 1.34
SREBF1-216ENST00000490796 XPNPEP3Q9NQH7 507 aa23.44■■□□□ 1.34
SREBF1-216ENST00000490796 SYNPO2Q9UMS6 1093 aa23.44■■□□□ 1.34
SREBF1-216ENST00000490796 ADCYAP1R1P41586 468 aa23.43■■□□□ 1.34
SREBF1-216ENST00000490796 TFAP4Q01664 338 aa23.43■■□□□ 1.34
SREBF1-216ENST00000490796 IKQ13123 557 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-216ENST00000490796 LRRC41Q15345 812 aa23.43■■□□□ 1.34
SREBF1-216ENST00000490796 FAM47AQ5JRC9 791 aa23.43■■□□□ 1.34
SREBF1-216ENST00000490796 SLFN13Q68D06 897 aa23.43■■□□□ 1.34
SREBF1-216ENST00000490796 NEDD1Q8NHV4 660 aa23.43■■□□□ 1.34
SREBF1-216ENST00000490796 FERMT2Q96AC1 680 aa23.43■■□□□ 1.34
SREBF1-216ENST00000490796 PRDM5Q9NQX1 630 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-216ENST00000490796 GREB1LQ9C091 1923 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-216ENST00000490796 BMP3P12645 472 aa23.42■■□□□ 1.34
SREBF1-216ENST00000490796 GPR153Q6NV75 609 aa23.42■■□□□ 1.34
SREBF1-216ENST00000490796 GMCL1P1Q8NEA9 526 aa23.42■■□□□ 1.34
SREBF1-216ENST00000490796 CRBNQ96SW2 442 aa23.42■■□□□ 1.34
SREBF1-216ENST00000490796 RAVER2Q9HCJ3 691 aaKnown RBP23.42■■□□□ 1.34
SREBF1-216ENST00000490796 ATP2A1O14983 1001 aa23.41■■□□□ 1.34
SREBF1-216ENST00000490796 AKR1A1P14550 325 aa23.41■■□□□ 1.34
SREBF1-216ENST00000490796 ANKRD35Q8N283 1001 aa23.41■■□□□ 1.34
SREBF1-216ENST00000490796 MSL3Q8N5Y2 521 aaKnown RBP23.41■■□□□ 1.34
SREBF1-216ENST00000490796 EVI5LQ96CN4 794 aa23.41■■□□□ 1.34
SREBF1-216ENST00000490796 FBXO40Q9UH90 709 aa23.41■■□□□ 1.34
SREBF1-216ENST00000490796 MYH4Q9Y623 1939 aa23.4■■□□□ 1.34
SREBF1-216ENST00000490796 TSPY2A6NKD2 308 aa23.4■■□□□ 1.34
SREBF1-216ENST00000490796 DEFB123Q8N688 67 aa23.4■■□□□ 1.34
SREBF1-216ENST00000490796 SLC38A10Q9HBR0 1119 aa23.4■■□□□ 1.34
SREBF1-216ENST00000490796 RIPK3Q9Y572 518 aa23.4■■□□□ 1.34
SREBF1-216ENST00000490796 PLIN4Q96Q06 1357 aa23.4■■□□□ 1.34
SREBF1-216ENST00000490796 TMEM232C9JQI7 657 aa23.39■■□□□ 1.33
SREBF1-216ENST00000490796 PGK1P00558 417 aa23.39■■□□□ 1.33
SREBF1-216ENST00000490796 FDX1P10109 184 aa23.39■■□□□ 1.33
SREBF1-216ENST00000490796 TAL1P17542 331 aaPredicted RBP23.39■■□□□ 1.33
SREBF1-216ENST00000490796 TRIM60Q495X7 471 aa23.39■■□□□ 1.33
SREBF1-216ENST00000490796 CCDC129Q6ZRS4 1044 aa23.39■■□□□ 1.33
SREBF1-216ENST00000490796 CHST13Q8NET6 341 aa23.39■■□□□ 1.33
SREBF1-216ENST00000490796 CHURC1Q8WUH1 139 aa23.39■■□□□ 1.33
SREBF1-216ENST00000490796 ZHX1Q9UKY1 873 aaPredicted RBP23.39■■□□□ 1.33
SREBF1-216ENST00000490796 FAM184BQ9ULE4 1060 aa23.39■■□□□ 1.33
SREBF1-216ENST00000490796 STX8Q9UNK0 236 aa23.39■■□□□ 1.33
SREBF1-216ENST00000490796 SMCHD1A6NHR9 2005 aa23.38■■□□□ 1.33
SREBF1-216ENST00000490796 SYNGAP1Q96PV0 1343 aa23.38■■□□□ 1.33
SREBF1-216ENST00000490796 SLC1A4P43007 532 aa23.38■■□□□ 1.33
SREBF1-216ENST00000490796 STAT2P52630 851 aa23.38■■□□□ 1.33
SREBF1-216ENST00000490796 OAZ1P54368 228 aa23.38■■□□□ 1.33
SREBF1-216ENST00000490796 PHF24Q9UPV7 400 aa23.38■■□□□ 1.33
SREBF1-216ENST00000490796 DNAH12Q6ZR08 3092 aa23.37■■□□□ 1.33
SREBF1-216ENST00000490796 PLXNA1Q9UIW2 1896 aa23.37■■□□□ 1.33
SREBF1-216ENST00000490796 RANBP6O60518 1105 aaKnown RBP23.37■■□□□ 1.33
SREBF1-216ENST00000490796 ZNF865P0CJ78 1059 aaPredicted RBP23.37■■□□□ 1.33
SREBF1-216ENST00000490796 CTDSPL2Q05D32 466 aa23.37■■□□□ 1.33
SREBF1-216ENST00000490796 FAM160B2Q86V87 743 aa23.37■■□□□ 1.33
SREBF1-216ENST00000490796 CHMP4CQ96CF2 233 aa23.37■■□□□ 1.33
SREBF1-216ENST00000490796 TOMM22Q9NS69 142 aa23.37■■□□□ 1.33
SREBF1-216ENST00000490796 HOMER2Q9NSB8 354 aa23.37■■□□□ 1.33
SREBF1-216ENST00000490796 MCCP23508 829 aa23.36■■□□□ 1.33
SREBF1-216ENST00000490796 HDAC1Q13547 482 aaPredicted RBP23.36■■□□□ 1.33
SREBF1-216ENST00000490796 ZNF467Q7Z7K2 595 aaPredicted RBP23.36■■□□□ 1.33
SREBF1-216ENST00000490796 GMCL1Q96IK5 515 aa23.36■■□□□ 1.33
SREBF1-216ENST00000490796 HELLSQ9NRZ9 838 aa23.36■■□□□ 1.33
SREBF1-216ENST00000490796 SALL3Q9BXA9 1300 aa23.35■■□□□ 1.33
SREBF1-216ENST00000490796 DNAJC25-GNG10A0A024R161 153 aa23.35■■□□□ 1.33
SREBF1-216ENST00000490796 PDE1AP54750 535 aa23.35■■□□□ 1.33
SREBF1-216ENST00000490796 SNX17Q15036 470 aa23.35■■□□□ 1.33
SREBF1-216ENST00000490796 MAMDC4Q6UXC1 1216 aa23.35■■□□□ 1.33
SREBF1-216ENST00000490796 STAG1Q8WVM7 1258 aa23.35■■□□□ 1.33
SREBF1-216ENST00000490796 SNAI1O95863 264 aaPredicted RBP23.34■■□□□ 1.33
SREBF1-216ENST00000490796 TLE2Q04725 743 aa23.34■■□□□ 1.33
SREBF1-216ENST00000490796 C1orf53Q5VUE5 145 aa23.34■■□□□ 1.33
SREBF1-216ENST00000490796 Q7L0L9 218 aa23.34■■□□□ 1.33
SREBF1-216ENST00000490796 SLC17A8Q8NDX2 589 aa23.34■■□□□ 1.33
SREBF1-216ENST00000490796 LENG1Q96BZ8 264 aaPredicted RBP23.34■■□□□ 1.33
SREBF1-216ENST00000490796 ACAD9Q9H845 621 aa23.34■■□□□ 1.33
SREBF1-216ENST00000490796 SPC25Q9HBM1 224 aa23.34■■□□□ 1.33
SREBF1-216ENST00000490796 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.34■■□□□ 1.33
SREBF1-216ENST00000490796 MTMR7Q9Y216 660 aa23.34■■□□□ 1.33
SREBF1-216ENST00000490796 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.34■■□□□ 1.33
SREBF1-216ENST00000490796 TRIM6-TRIM34B2RNG4 842 aa23.33■■□□□ 1.33
SREBF1-216ENST00000490796 POTEB2H3BUK9 544 aa23.33■■□□□ 1.33
SREBF1-216ENST00000490796 ACVR2BQ13705 512 aa23.33■■□□□ 1.33
SREBF1-216ENST00000490796 NUP133Q8WUM0 1156 aa23.33■■□□□ 1.33
SREBF1-216ENST00000490796 YTHDC1Q96MU7 727 aaKnown RBP23.33■■□□□ 1.33
SREBF1-216ENST00000490796 TSEN34Q9BSV6 310 aaKnown RBP23.33■■□□□ 1.33
SREBF1-216ENST00000490796 ABHD16BQ9H3Z7 469 aa23.33■■□□□ 1.33
SREBF1-216ENST00000490796 PDLIM7Q9NR12 457 aa23.33■■□□□ 1.33
SREBF1-216ENST00000490796 TACC3Q9Y6A5 838 aa23.33■■□□□ 1.33
SREBF1-216ENST00000490796 A0A1W2PQ45 241 aaPredicted RBP23.32■■□□□ 1.32
SREBF1-216ENST00000490796 A0A1W2PQY0 241 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 TKFCQ3LXA3 575 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 MCMDC2Q4G0Z9 681 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 VPS53Q5VIR6 699 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 RCSD1Q6JBY9 416 aa23.32■■□□□ 1.32
SREBF1-216ENST00000490796 KCTD1Q719H9 257 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms