RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PLCD1P51178 756 aa16.74■□□□□ 0.27
EXOSC3-207ENST00000490516 TMEM67Q5HYA8 995 aa16.74■□□□□ 0.27
EXOSC3-207ENST00000490516 SPICE1Q8N0Z3 855 aa16.74■□□□□ 0.27
EXOSC3-207ENST00000490516 ARNTL2Q8WYA1 636 aa16.74■□□□□ 0.27
EXOSC3-207ENST00000490516 VWCEQ96DN2 955 aa16.74■□□□□ 0.27
EXOSC3-207ENST00000490516 WNT8AQ9H1J5 351 aa16.74■□□□□ 0.27
EXOSC3-207ENST00000490516 MYH8P13535 1937 aa16.73■□□□□ 0.27
EXOSC3-207ENST00000490516 MPHOSPH10O00566 681 aaKnown RBP16.73■□□□□ 0.27
EXOSC3-207ENST00000490516 CYP2E1P05181 493 aaPredicted RBP16.73■□□□□ 0.27
EXOSC3-207ENST00000490516 GNASQ5JWF2 1037 aa16.73■□□□□ 0.27
EXOSC3-207ENST00000490516 TTC6Q86TZ1 520 aa16.73■□□□□ 0.27
EXOSC3-207ENST00000490516 RIOX2Q8IUF8 465 aa16.73■□□□□ 0.27
EXOSC3-207ENST00000490516 MIGA1Q8NAN2 632 aa16.73■□□□□ 0.27
EXOSC3-207ENST00000490516 NAV1Q8NEY1 1877 aa16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 CYP7A1P22680 504 aa16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 EVX2Q03828 476 aa16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 TTLL4Q14679 1199 aa16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 CSPP1Q1MSJ5 1256 aa16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 GJD3Q8N144 294 aa16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 SCLYQ96I15 445 aa16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 NOC4LQ9BVI4 516 aaKnown RBP16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 UPF3AQ9H1J1 476 aaKnown RBP16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 PIH1D3Q9NQM4 214 aaKnown RBP16.72■□□□□ 0.27
EXOSC3-207ENST00000490516 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
EXOSC3-207ENST00000490516 GJA9P57773 515 aa16.71■□□□□ 0.27
EXOSC3-207ENST00000490516 GRB10Q13322 594 aa16.71■□□□□ 0.27
EXOSC3-207ENST00000490516 SPRED2Q7Z698 418 aa16.71■□□□□ 0.27
EXOSC3-207ENST00000490516 CLEC10AQ8IUN9 316 aa16.71■□□□□ 0.27
EXOSC3-207ENST00000490516 FAM178BQ8IXR5 827 aa16.71■□□□□ 0.27
EXOSC3-207ENST00000490516 RPUSD2Q8IZ73 545 aaKnown RBP16.71■□□□□ 0.27
EXOSC3-207ENST00000490516 PHOX2BQ99453 314 aa16.71■□□□□ 0.27
EXOSC3-207ENST00000490516 ZNF318Q5VUA4 2279 aa16.71■□□□□ 0.27
EXOSC3-207ENST00000490516 CTAGE5O15320 804 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 LPXNO60711 386 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 SSTR3P32745 418 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 STAT3P40763 770 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 BEX3Q00994 111 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 TAP1Q03518 808 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 TTC39AQ5SRH9 613 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 SLC43A3Q8NBI5 491 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 ANKS1AQ92625 1134 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 MEIS3Q99687 375 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 TRPV6Q9H1D0 765 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 SPC25Q9HBM1 224 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 FBXO28Q9NVF7 368 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 ADAMTS5Q9UNA0 930 aa16.7■□□□□ 0.26
EXOSC3-207ENST00000490516 PTPRSQ13332 1948 aa16.69■□□□□ 0.26
EXOSC3-207ENST00000490516 ALADP13716 330 aa16.69■□□□□ 0.26
EXOSC3-207ENST00000490516 ZAP70P43403 619 aa16.69■□□□□ 0.26
EXOSC3-207ENST00000490516 ACVR2BQ13705 512 aa16.69■□□□□ 0.26
EXOSC3-207ENST00000490516 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
EXOSC3-207ENST00000490516 MAMDC4Q6UXC1 1216 aa16.69■□□□□ 0.26
EXOSC3-207ENST00000490516 SIAH1Q8IUQ4 282 aa16.69■□□□□ 0.26
EXOSC3-207ENST00000490516 MSL3Q8N5Y2 521 aaKnown RBP16.69■□□□□ 0.26
EXOSC3-207ENST00000490516 KCNH6Q9H252 994 aa16.69■□□□□ 0.26
EXOSC3-207ENST00000490516 GABPAQ06546 454 aa16.68■□□□□ 0.26
EXOSC3-207ENST00000490516 CXCL17Q6UXB2 119 aa16.68■□□□□ 0.26
EXOSC3-207ENST00000490516 ZNF214Q9UL59 606 aaPredicted RBP16.68■□□□□ 0.26
EXOSC3-207ENST00000490516 HDAC5Q9UQL6 1122 aa16.68■□□□□ 0.26
EXOSC3-207ENST00000490516 CACNA1AO00555 2505 aa16.68■□□□□ 0.26
EXOSC3-207ENST00000490516 USP34Q70CQ2 3546 aa16.68■□□□□ 0.26
EXOSC3-207ENST00000490516 GRIN2DO15399 1336 aa16.68■□□□□ 0.26
EXOSC3-207ENST00000490516 VWA5AO00534 786 aa16.67■□□□□ 0.26
EXOSC3-207ENST00000490516 B4GALT4O60513 344 aa16.67■□□□□ 0.26
EXOSC3-207ENST00000490516 POLR3DP05423 398 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-207ENST00000490516 ITGA7Q13683 1181 aa16.67■□□□□ 0.26
EXOSC3-207ENST00000490516 DEFB128Q7Z7B8 93 aa16.67■□□□□ 0.26
EXOSC3-207ENST00000490516 AGBL1Q96MI9 1066 aa16.67■□□□□ 0.26
EXOSC3-207ENST00000490516 VCPKMTQ9H867 229 aa16.67■□□□□ 0.26
EXOSC3-207ENST00000490516 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.67■□□□□ 0.26
EXOSC3-207ENST00000490516 TMX2Q9Y320 296 aa16.67■□□□□ 0.26
EXOSC3-207ENST00000490516 WDR46O15213 610 aaKnown RBP16.66■□□□□ 0.26
EXOSC3-207ENST00000490516 IL9P15248 144 aa16.66■□□□□ 0.26
EXOSC3-207ENST00000490516 REPS2Q8NFH8 660 aa16.66■□□□□ 0.26
EXOSC3-207ENST00000490516 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-207ENST00000490516 DDX11Q96FC9 970 aa16.66■□□□□ 0.26
EXOSC3-207ENST00000490516 DBNDD2Q9BQY9 259 aa16.66■□□□□ 0.26
EXOSC3-207ENST00000490516 UBE2ZQ9H832 354 aaPredicted RBP16.66■□□□□ 0.26
EXOSC3-207ENST00000490516 DNAJC25-GNG10A0A024R161 153 aa16.65■□□□□ 0.26
EXOSC3-207ENST00000490516 IDH1O75874 414 aaKnown RBP16.65■□□□□ 0.26
EXOSC3-207ENST00000490516 CCDC158Q5M9N0 1113 aa16.65■□□□□ 0.26
EXOSC3-207ENST00000490516 TMEM179Q6ZVK1 233 aa16.65■□□□□ 0.26
EXOSC3-207ENST00000490516 MAGEB6Q8N7X4 407 aa16.65■□□□□ 0.26
EXOSC3-207ENST00000490516 GDPD5Q8WTR4 605 aa16.65■□□□□ 0.26
EXOSC3-207ENST00000490516 ABHD16BQ9H3Z7 469 aa16.65■□□□□ 0.26
EXOSC3-207ENST00000490516 ARHGEF10LQ9HCE6 1279 aa16.65■□□□□ 0.26
EXOSC3-207ENST00000490516 ASTN1O14525 1302 aa16.65■□□□□ 0.26
EXOSC3-207ENST00000490516 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 DCXO43602 365 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 COPB2P35606 906 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 PSMC6P62333 389 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 ICA1Q05084 483 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 MTX1Q13505 466 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 LEXMQ3ZCV2 418 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 CERS3Q8IU89 383 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 FGD4Q96M96 766 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 SLC9A7Q96T83 725 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 MRS2Q9HD23 443 aa16.64■□□□□ 0.25
EXOSC3-207ENST00000490516 PPP1R9AQ9ULJ8 1098 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms