RNA–Protein interactions for RNA: ENST00000490112.1

UBP1-211, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 633 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-211ENST00000490112 ATG4CQ96DT6 458 aa12.83□□□□□ -0.36
UBP1-211ENST00000490112 LRRCC1Q9C099 1032 aa12.83□□□□□ -0.36
UBP1-211ENST00000490112 MTMR10Q9NXD2 777 aa12.83□□□□□ -0.36
UBP1-211ENST00000490112 ADAMTS5Q9UNA0 930 aa12.83□□□□□ -0.36
UBP1-211ENST00000490112 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
UBP1-211ENST00000490112 SLC4A4Q9Y6R1 1079 aa12.83□□□□□ -0.36
UBP1-211ENST00000490112 RLFQ13129 1914 aa12.83□□□□□ -0.36
UBP1-211ENST00000490112 PRKAB2O43741 272 aa12.82□□□□□ -0.36
UBP1-211ENST00000490112 COBLO75128 1261 aa12.82□□□□□ -0.36
UBP1-211ENST00000490112 EEF2P13639 858 aaKnown RBP12.82□□□□□ -0.36
UBP1-211ENST00000490112 KCTD2Q14681 263 aa12.82□□□□□ -0.36
UBP1-211ENST00000490112 KIAA1755Q5JYT7 1200 aa12.82□□□□□ -0.36
UBP1-211ENST00000490112 GJC2Q5T442 439 aaPredicted RBP12.82□□□□□ -0.36
UBP1-211ENST00000490112 C1orf53Q5VUE5 145 aa12.82□□□□□ -0.36
UBP1-211ENST00000490112 SLC39A5Q6ZMH5 540 aa12.82□□□□□ -0.36
UBP1-211ENST00000490112 RIOX2Q8IUF8 465 aa12.82□□□□□ -0.36
UBP1-211ENST00000490112 MAML3Q96JK9 1138 aa12.82□□□□□ -0.36
UBP1-211ENST00000490112 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
UBP1-211ENST00000490112 ARPP21Q9UBL0 812 aaPredicted RBP12.82□□□□□ -0.36
UBP1-211ENST00000490112 DIS3Q9Y2L1 958 aaKnown RBP12.82□□□□□ -0.36
UBP1-211ENST00000490112 TMEM132BQ14DG7 1078 aa12.81□□□□□ -0.36
UBP1-211ENST00000490112 GIMAP6Q6P9H5 292 aa12.81□□□□□ -0.36
UBP1-211ENST00000490112 Q7L0L9 218 aa12.81□□□□□ -0.36
UBP1-211ENST00000490112 GPATCH3Q96I76 525 aa12.81□□□□□ -0.36
UBP1-211ENST00000490112 MMP19Q99542 508 aa12.81□□□□□ -0.36
UBP1-211ENST00000490112 ATP11BQ9Y2G3 1177 aa12.81□□□□□ -0.36
UBP1-211ENST00000490112 MYH7P12883 1935 aa12.81□□□□□ -0.36
UBP1-211ENST00000490112 BAZ2AQ9UIF9 1905 aaKnown RBP12.81□□□□□ -0.36
UBP1-211ENST00000490112 VWA5AO00534 786 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 RARBP10826 455 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 STAT3P40763 770 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 SNX17Q15036 470 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 LRRC41Q15345 812 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 SBK1Q52WX2 424 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 CTR9Q6PD62 1173 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 RNF180Q86T96 592 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 MSL3Q8N5Y2 521 aaKnown RBP12.8□□□□□ -0.36
UBP1-211ENST00000490112 TINF2Q9BSI4 451 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 MKNK2Q9HBH9 465 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 ZNF287Q9HBT7 754 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 PPP1R9AQ9ULJ8 1098 aa12.8□□□□□ -0.36
UBP1-211ENST00000490112 ZNFX1Q9P2E3 1918 aaKnown RBP12.8□□□□□ -0.36
UBP1-211ENST00000490112 PARP14Q460N5 1801 aa12.79□□□□□ -0.36
UBP1-211ENST00000490112 CUL9Q8IWT3 2517 aa12.79□□□□□ -0.36
UBP1-211ENST00000490112 CYP2D7A0A087X1C5 515 aa12.79□□□□□ -0.36
UBP1-211ENST00000490112 ADCYAP1R1P41586 468 aa12.79□□□□□ -0.36
UBP1-211ENST00000490112 LRRFIP1Q32MZ4 808 aaKnown RBP12.79□□□□□ -0.36
UBP1-211ENST00000490112 CLEC10AQ8IUN9 316 aa12.79□□□□□ -0.36
UBP1-211ENST00000490112 PUS7LQ9H0K6 701 aaKnown RBP12.79□□□□□ -0.36
UBP1-211ENST00000490112 ECHDC1Q9NTX5 307 aa12.79□□□□□ -0.36
UBP1-211ENST00000490112 RCAN3Q9UKA8 241 aa12.79□□□□□ -0.36
UBP1-211ENST00000490112 CNPY2Q9Y2B0 182 aa12.79□□□□□ -0.36
UBP1-211ENST00000490112 C2orf72A6NCS6 295 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 RAD21O60216 631 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 ZFYP08048 801 aaPredicted RBP12.78□□□□□ -0.36
UBP1-211ENST00000490112 NUDT7P0C024 238 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 GNAT2P19087 354 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 ZNF792Q3KQV3 632 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 PRAMEF19Q5SWL8 479 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 ANO1Q5XXA6 986 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 PRPF38AQ8NAV1 312 aaKnown RBP12.78□□□□□ -0.36
UBP1-211ENST00000490112 STRBPQ96SI9 672 aaKnown RBP12.78□□□□□ -0.36
UBP1-211ENST00000490112 SLF1Q9BQI6 1058 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 TEX13BQ9BXU2 312 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 XPNPEP3Q9NQH7 507 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 PRDM5Q9NQX1 630 aaPredicted RBP12.78□□□□□ -0.36
UBP1-211ENST00000490112 NYAP2Q9P242 653 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 ZNF214Q9UL59 606 aaPredicted RBP12.78□□□□□ -0.36
UBP1-211ENST00000490112 PHF24Q9UPV7 400 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 TACC3Q9Y6A5 838 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 ROBO3Q96MS0 1386 aa12.78□□□□□ -0.36
UBP1-211ENST00000490112 COL11A1P12107 1806 aaPredicted RBP12.77□□□□□ -0.37
UBP1-211ENST00000490112 AKR1A1P14550 325 aa12.77□□□□□ -0.37
UBP1-211ENST00000490112 TRIM60Q495X7 471 aa12.77□□□□□ -0.37
UBP1-211ENST00000490112 SLFNL1Q499Z3 407 aa12.77□□□□□ -0.37
UBP1-211ENST00000490112 FAM47AQ5JRC9 791 aa12.77□□□□□ -0.37
UBP1-211ENST00000490112 FAM83BQ5T0W9 1011 aa12.77□□□□□ -0.37
UBP1-211ENST00000490112 ZNF697Q5TEC3 545 aa12.77□□□□□ -0.37
UBP1-211ENST00000490112 KBTBD3Q8NAB2 608 aa12.77□□□□□ -0.37
UBP1-211ENST00000490112 TSEN34Q9BSV6 310 aaKnown RBP12.77□□□□□ -0.37
UBP1-211ENST00000490112 FBXO28Q9NVF7 368 aa12.77□□□□□ -0.37
UBP1-211ENST00000490112 SYNPO2Q9UMS6 1093 aa12.77□□□□□ -0.37
UBP1-211ENST00000490112 CTDP1Q9Y5B0 961 aaPredicted RBP12.77□□□□□ -0.37
UBP1-211ENST00000490112 LTBP2Q14767 1821 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 ATP2A1O14983 1001 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 ZBED4O75132 1171 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 PGK2P07205 417 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 ZNF444Q8N0Y2 327 aaPredicted RBP12.76□□□□□ -0.37
UBP1-211ENST00000490112 REPS2Q8NFH8 660 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 NUP133Q8WUM0 1156 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 APPBP2Q92624 585 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 BADQ92934 168 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 FERMT2Q96AC1 680 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 DDX11Q96FC9 970 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 MFRPQ9BY79 579 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 PDLIM7Q9NR12 457 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 SYNGAP1Q96PV0 1343 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
UBP1-211ENST00000490112 GSG1L2A8MUP6 293 aa12.75□□□□□ -0.37
UBP1-211ENST00000490112 MINDY4BA8MYZ0 360 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms