RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 CHURC1Q8WUH1 139 aa22.45■■□□□ 1.18
MRPL55-230ENST00000489430 SLC38A10Q9HBR0 1119 aa22.45■■□□□ 1.18
MRPL55-230ENST00000489430 TOMM22Q9NS69 142 aa22.45■■□□□ 1.18
MRPL55-230ENST00000489430 FARP2O94887 1054 aaPredicted RBP22.44■■□□□ 1.18
MRPL55-230ENST00000489430 STAT2P52630 851 aa22.44■■□□□ 1.18
MRPL55-230ENST00000489430 ZNF236Q9UL36 1845 aa22.43■■□□□ 1.18
MRPL55-230ENST00000489430 HAND2P61296 217 aa22.43■■□□□ 1.18
MRPL55-230ENST00000489430 KCTD2Q14681 263 aa22.43■■□□□ 1.18
MRPL55-230ENST00000489430 IMMTQ16891 758 aaKnown RBP22.43■■□□□ 1.18
MRPL55-230ENST00000489430 RCSD1Q6JBY9 416 aa22.43■■□□□ 1.18
MRPL55-230ENST00000489430 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.43■■□□□ 1.18
MRPL55-230ENST00000489430 ESR2Q92731 530 aa22.43■■□□□ 1.18
MRPL55-230ENST00000489430 HTATIP2Q9BUP3 242 aa22.43■■□□□ 1.18
MRPL55-230ENST00000489430 NBPF3Q9H094 633 aa22.43■■□□□ 1.18
MRPL55-230ENST00000489430 DIS3Q9Y2L1 958 aaKnown RBP22.43■■□□□ 1.18
MRPL55-230ENST00000489430 CTDP1Q9Y5B0 961 aaPredicted RBP22.43■■□□□ 1.18
MRPL55-230ENST00000489430 NMT2O60551 498 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 MSCO60682 206 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 TOP1P11387 765 aaKnown RBP22.42■■□□□ 1.18
MRPL55-230ENST00000489430 CCDC178Q5BJE1 867 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 RRP12Q5JTH9 1297 aaKnown RBP22.42■■□□□ 1.18
MRPL55-230ENST00000489430 TBC1D10CQ8IV04 446 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 NPLOC4Q8TAT6 608 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 DCAF4Q8WV16 495 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 KIFC2Q96AC6 838 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 MMP19Q99542 508 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 FLRT1Q9NZU1 646 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 OGDHLQ9ULD0 1010 aa22.42■■□□□ 1.18
MRPL55-230ENST00000489430 TMEM232C9JQI7 657 aa22.41■■□□□ 1.18
MRPL55-230ENST00000489430 COBLO75128 1261 aa22.41■■□□□ 1.18
MRPL55-230ENST00000489430 MCCP23508 829 aa22.41■■□□□ 1.18
MRPL55-230ENST00000489430 CENPQQ7L2Z9 268 aaPredicted RBP22.41■■□□□ 1.18
MRPL55-230ENST00000489430 FBXO40Q9UH90 709 aa22.41■■□□□ 1.18
MRPL55-230ENST00000489430 PARP14Q460N5 1801 aa22.41■■□□□ 1.18
MRPL55-230ENST00000489430 CHMLP26374 656 aa22.4■■□□□ 1.18
MRPL55-230ENST00000489430 SNRNP48Q6IEG0 339 aaKnown RBP22.4■■□□□ 1.18
MRPL55-230ENST00000489430 DGKHQ86XP1 1220 aa22.4■■□□□ 1.18
MRPL55-230ENST00000489430 NRBP1Q9UHY1 535 aa22.4■■□□□ 1.18
MRPL55-230ENST00000489430 NECAB2Q7Z6G3 386 aa22.39■■□□□ 1.17
MRPL55-230ENST00000489430 IQCA1Q86XH1 822 aa22.39■■□□□ 1.17
MRPL55-230ENST00000489430 CHST13Q8NET6 341 aa22.39■■□□□ 1.17
MRPL55-230ENST00000489430 MAML3Q96JK9 1138 aa22.39■■□□□ 1.17
MRPL55-230ENST00000489430 TMEM47Q9BQJ4 181 aa22.39■■□□□ 1.17
MRPL55-230ENST00000489430 CNNM2Q9H8M5 875 aa22.39■■□□□ 1.17
MRPL55-230ENST00000489430 LHX8Q68G74 356 aa22.38■■□□□ 1.17
MRPL55-230ENST00000489430 MSL3Q8N5Y2 521 aaKnown RBP22.38■■□□□ 1.17
MRPL55-230ENST00000489430 MYH4Q9Y623 1939 aa22.37■■□□□ 1.17
MRPL55-230ENST00000489430 CCND3P30281 292 aaPredicted RBP22.37■■□□□ 1.17
MRPL55-230ENST00000489430 CYP2C19P33261 490 aa22.37■■□□□ 1.17
MRPL55-230ENST00000489430 IKQ13123 557 aaPredicted RBP22.37■■□□□ 1.17
MRPL55-230ENST00000489430 ZNF792Q3KQV3 632 aa22.37■■□□□ 1.17
MRPL55-230ENST00000489430 TKFCQ3LXA3 575 aa22.37■■□□□ 1.17
MRPL55-230ENST00000489430 BTNL9Q6UXG8 535 aa22.37■■□□□ 1.17
MRPL55-230ENST00000489430 CPXCR1Q8N123 301 aa22.37■■□□□ 1.17
MRPL55-230ENST00000489430 ANKS1AQ92625 1134 aa22.37■■□□□ 1.17
MRPL55-230ENST00000489430 KRT23Q9C075 422 aa22.37■■□□□ 1.17
MRPL55-230ENST00000489430 NEDD4P46934 1319 aa22.36■■□□□ 1.17
MRPL55-230ENST00000489430 CYBAP13498 195 aa22.36■■□□□ 1.17
MRPL55-230ENST00000489430 IL25Q9H293 177 aa22.36■■□□□ 1.17
MRPL55-230ENST00000489430 RAVER2Q9HCJ3 691 aaKnown RBP22.36■■□□□ 1.17
MRPL55-230ENST00000489430 DDX20Q9UHI6 824 aaKnown RBP22.36■■□□□ 1.17
MRPL55-230ENST00000489430 PNMA2Q9UL42 364 aa22.36■■□□□ 1.17
MRPL55-230ENST00000489430 ISY1Q9ULR0 285 aaKnown RBP22.36■■□□□ 1.17
MRPL55-230ENST00000489430 RIPK3Q9Y572 518 aa22.36■■□□□ 1.17
MRPL55-230ENST00000489430 DNAJC25-GNG10A0A024R161 153 aa22.35■■□□□ 1.17
MRPL55-230ENST00000489430 SGSM2O43147 1006 aa22.35■■□□□ 1.17
MRPL55-230ENST00000489430 KCTD1Q719H9 257 aa22.35■■□□□ 1.17
MRPL55-230ENST00000489430 ZNF467Q7Z7K2 595 aaPredicted RBP22.35■■□□□ 1.17
MRPL55-230ENST00000489430 PAWRQ96IZ0 340 aaKnown RBP22.35■■□□□ 1.17
MRPL55-230ENST00000489430 PRR12Q9ULL5 1215 aa22.35■■□□□ 1.17
MRPL55-230ENST00000489430 U3KPZ7 1027 aaPredicted RBP22.35■■□□□ 1.17
MRPL55-230ENST00000489430 SEPT4O43236 478 aa22.34■■□□□ 1.17
MRPL55-230ENST00000489430 KDM4AO75164 1064 aa22.34■■□□□ 1.17
MRPL55-230ENST00000489430 SNHG28P0DPA3 235 aa22.34■■□□□ 1.17
MRPL55-230ENST00000489430 MNX1P50219 401 aaPredicted RBP22.34■■□□□ 1.17
MRPL55-230ENST00000489430 CCDC96Q2M329 555 aa22.34■■□□□ 1.17
MRPL55-230ENST00000489430 DPF3Q92784 378 aa22.34■■□□□ 1.17
MRPL55-230ENST00000489430 DDX11Q96FC9 970 aa22.34■■□□□ 1.17
MRPL55-230ENST00000489430 TINF2Q9BSI4 451 aa22.34■■□□□ 1.17
MRPL55-230ENST00000489430 PGK2P07205 417 aa22.33■■□□□ 1.17
MRPL55-230ENST00000489430 PDHBP11177 359 aa22.33■■□□□ 1.17
MRPL55-230ENST00000489430 GPATCH4Q5T3I0 446 aaKnown RBP22.33■■□□□ 1.17
MRPL55-230ENST00000489430 ZSWIM5Q9P217 1185 aa22.33■■□□□ 1.17
MRPL55-230ENST00000489430 NR2E3Q9Y5X4 410 aa22.33■■□□□ 1.17
MRPL55-230ENST00000489430 ZNF536O15090 1300 aa22.32■■□□□ 1.16
MRPL55-230ENST00000489430 CNGA1P29973 690 aa22.32■■□□□ 1.16
MRPL55-230ENST00000489430 MAMDC4Q6UXC1 1216 aa22.32■■□□□ 1.16
MRPL55-230ENST00000489430 ANKRD35Q8N283 1001 aa22.32■■□□□ 1.16
MRPL55-230ENST00000489430 TRPV1Q8NER1 839 aa22.32■■□□□ 1.16
MRPL55-230ENST00000489430 ZSCAN10Q96SZ4 725 aaPredicted RBP22.32■■□□□ 1.16
MRPL55-230ENST00000489430 RANBP17Q9H2T7 1088 aaKnown RBP22.32■■□□□ 1.16
MRPL55-230ENST00000489430 ACAD9Q9H845 621 aa22.32■■□□□ 1.16
MRPL55-230ENST00000489430 SYNGAP1Q96PV0 1343 aa22.31■■□□□ 1.16
MRPL55-230ENST00000489430 B4E1Z4 1266 aa22.31■■□□□ 1.16
MRPL55-230ENST00000489430 ZNF543Q08ER8 600 aa22.31■■□□□ 1.16
MRPL55-230ENST00000489430 TRDNQ13061 729 aa22.31■■□□□ 1.16
MRPL55-230ENST00000489430 BMP2KLQ5H9B9 411 aa22.31■■□□□ 1.16
MRPL55-230ENST00000489430 C11orf49Q9H6J7 331 aa22.31■■□□□ 1.16
MRPL55-230ENST00000489430 COL11A1P12107 1806 aaPredicted RBP22.31■■□□□ 1.16
MRPL55-230ENST00000489430 LAMA4Q16363 1823 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms