RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 JMYQ8N9B5 988 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 IQUBQ8NA54 791 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 SRRTQ9BXP5 876 aaKnown RBP8.63□□□□□ -1.03
BEST3-205ENST00000488961 UBXN6Q9BZV1 441 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 CNNM2Q9H8M5 875 aa8.63□□□□□ -1.03
BEST3-205ENST00000488961 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 PHLPP1O60346 1717 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 NEBLO76041 1014 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 GPSM2P81274 684 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 CUL4BQ13620 913 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 SLC35G1Q2M3R5 365 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 NBPF9Q3BBW0 867 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 TPTE2Q6XPS3 522 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 TOGARAM2Q6ZUX3 1019 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 VPS16Q9H269 839 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 LZTFL1Q9NQ48 299 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 CTNND2Q9UQB3 1225 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 GDAQ9Y2T3 454 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 TBC1D8O95759 1140 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 SKIDA1Q1XH10 827 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 LRRC47Q8N1G4 583 aaKnown RBP8.62□□□□□ -1.03
BEST3-205ENST00000488961 ZNF513Q8N8E2 541 aaPredicted RBP8.62□□□□□ -1.03
BEST3-205ENST00000488961 CTCFLQ8NI51 663 aaPredicted RBP8.62□□□□□ -1.03
BEST3-205ENST00000488961 KAT2BQ92831 832 aa8.62□□□□□ -1.03
BEST3-205ENST00000488961 RBM28Q9NW13 759 aaKnown RBP8.62□□□□□ -1.03
BEST3-205ENST00000488961 TRIM75PA6NK02 468 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 H3BQF6 201 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 LDHBP07195 334 aaKnown RBP8.61□□□□□ -1.03
BEST3-205ENST00000488961 TM4SF1P30408 202 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 KRT2P35908 639 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 TCP10Q12799 353 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 CNBD1Q8NA66 436 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 EXOC4Q96A65 974 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 MRFAP1L1Q96HT8 127 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 ZNF512BQ96KM6 892 aaPredicted RBP8.61□□□□□ -1.03
BEST3-205ENST00000488961 PPP1R13BQ96KQ4 1090 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 TMEM60Q9H2L4 133 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 HPSEQ9Y251 543 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 COL14A1Q05707 1796 aaKnown RBP8.61□□□□□ -1.03
BEST3-205ENST00000488961 SOWAHDA6NJG2 315 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 IVLP07476 585 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 TSPY3P0CV98 308 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 TSPY8P0CW00 308 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 TOP1P11387 765 aaKnown RBP8.61□□□□□ -1.03
BEST3-205ENST00000488961 PAX7P23759 505 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 GTF2IP78347 998 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 MYL5Q02045 173 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 C11orf91Q3C1V1 193 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 TTC38Q5R3I4 469 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 TRAPPC3LQ5T215 181 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 JAKMIP3Q5VZ66 844 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 SLC30A10Q6XR72 485 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 PNMA1Q8ND90 353 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 FAXDC2Q96IV6 333 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 CRNKL1Q9BZJ0 848 aaKnown RBP8.61□□□□□ -1.03
BEST3-205ENST00000488961 ARGLU1Q9NWB6 273 aaPredicted RBP8.61□□□□□ -1.03
BEST3-205ENST00000488961 TMEM260Q9NX78 707 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 NARFQ9UHQ1 456 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 CACNA1SQ13698 1873 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 ABCC6O95255 1503 aa8.61□□□□□ -1.03
BEST3-205ENST00000488961 CUTAO60888 179 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 CLSTN1O94985 981 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 SLC16A2P36021 539 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 SSR1P43307 286 aaKnown RBP8.6□□□□□ -1.03
BEST3-205ENST00000488961 UBE4AQ14139 1066 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 ALX1Q15699 326 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 NPY5RQ15761 445 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 RCSD1Q6JBY9 416 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 RPGRQ92834 1020 aaKnown RBP8.6□□□□□ -1.03
BEST3-205ENST00000488961 COA7Q96BR5 231 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 RNF41Q9H4P4 317 aaPredicted RBP8.6□□□□□ -1.03
BEST3-205ENST00000488961 KAT14Q9H8E8 782 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 GPCPD1Q9NPB8 672 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 KLHL33A6NCF5 533 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 RBAK-RBAKDNI3L0D1 243 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 RNF225M0QZC1 329 aaPredicted RBP8.6□□□□□ -1.03
BEST3-205ENST00000488961 CYTH3O43739 400 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 URI1O94763 535 aaPredicted RBP8.6□□□□□ -1.03
BEST3-205ENST00000488961 TPM1P09493 284 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 PTPREP23469 700 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 BTDP43251 543 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 FUT2Q10981 343 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 FBXO33Q7Z6M2 555 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 BIN2Q9UBW5 565 aaPredicted RBP8.6□□□□□ -1.03
BEST3-205ENST00000488961 PNPLA7Q6ZV29 1317 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 CNTNAP5Q8WYK1 1306 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 ATRNO75882 1429 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 LAMA3Q16787 3333 aa8.6□□□□□ -1.03
BEST3-205ENST00000488961 ACTN4O43707 911 aaKnown RBP8.59□□□□□ -1.03
BEST3-205ENST00000488961 MDM2Q00987 491 aaPredicted RBP8.59□□□□□ -1.03
BEST3-205ENST00000488961 LETM2Q2VYF4 491 aa8.59□□□□□ -1.03
BEST3-205ENST00000488961 MFSD14BQ5SR56 506 aa8.59□□□□□ -1.03
BEST3-205ENST00000488961 RRAGBQ5VZM2 374 aa8.59□□□□□ -1.03
BEST3-205ENST00000488961 PRR5LQ6MZQ0 368 aa8.59□□□□□ -1.03
BEST3-205ENST00000488961 TRMT1LQ7Z2T5 733 aaKnown RBP8.59□□□□□ -1.03
BEST3-205ENST00000488961 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.59□□□□□ -1.03
BEST3-205ENST00000488961 TADA2BQ86TJ2 420 aa8.59□□□□□ -1.03
BEST3-205ENST00000488961 CASZ1Q86V15 1759 aa8.59□□□□□ -1.03
BEST3-205ENST00000488961 LRRC15Q8TF66 581 aa8.59□□□□□ -1.03
BEST3-205ENST00000488961 MTRQ99707 1265 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms