RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 PLXNA1Q9UIW2 1896 aa22.96■■□□□ 1.27
CD55-209ENST00000488171 TRIOBPQ9H2D6 2365 aa22.95■■□□□ 1.27
CD55-209ENST00000488171 ATP2A1O14983 1001 aa22.95■■□□□ 1.26
CD55-209ENST00000488171 ALX1Q15699 326 aa22.95■■□□□ 1.26
CD55-209ENST00000488171 SLFN13Q68D06 897 aa22.95■■□□□ 1.26
CD55-209ENST00000488171 KIFC2Q96AC6 838 aa22.95■■□□□ 1.26
CD55-209ENST00000488171 GDF15Q99988 308 aa22.95■■□□□ 1.26
CD55-209ENST00000488171 FEM1BQ9UK73 627 aa22.95■■□□□ 1.26
CD55-209ENST00000488171 DIS3Q9Y2L1 958 aaKnown RBP22.95■■□□□ 1.26
CD55-209ENST00000488171 DNM1LO00429 736 aa22.94■■□□□ 1.26
CD55-209ENST00000488171 SYN1P17600 705 aa22.94■■□□□ 1.26
CD55-209ENST00000488171 MCMDC2Q4G0Z9 681 aa22.94■■□□□ 1.26
CD55-209ENST00000488171 ANO1Q5XXA6 986 aa22.94■■□□□ 1.26
CD55-209ENST00000488171 SLC38A10Q9HBR0 1119 aa22.94■■□□□ 1.26
CD55-209ENST00000488171 IL17RBQ9NRM6 502 aa22.94■■□□□ 1.26
CD55-209ENST00000488171 ZBED4O75132 1171 aa22.93■■□□□ 1.26
CD55-209ENST00000488171 NMIQ13287 307 aaPredicted RBP22.93■■□□□ 1.26
CD55-209ENST00000488171 ZNF589Q86UQ0 364 aaPredicted RBP22.93■■□□□ 1.26
CD55-209ENST00000488171 CHD1LQ86WJ1 897 aa22.93■■□□□ 1.26
CD55-209ENST00000488171 SENP6Q9GZR1 1112 aaPredicted RBP22.93■■□□□ 1.26
CD55-209ENST00000488171 A0A1W2PPC1 479 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 TSPY2A6NKD2 308 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 TRIM6-TRIM34B2RNG4 842 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 NMT2O60551 498 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 FGRP09769 529 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 BMP3P12645 472 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 NUCB1Q02818 461 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 PLEKHM2Q8IWE5 1019 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 CPXCR1Q8N123 301 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 GMCL1Q96IK5 515 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 TINF2Q9BSI4 451 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 RAVER2Q9HCJ3 691 aaKnown RBP22.92■■□□□ 1.26
CD55-209ENST00000488171 NRBP1Q9UHY1 535 aa22.92■■□□□ 1.26
CD55-209ENST00000488171 FGAP02671 866 aa22.91■■□□□ 1.26
CD55-209ENST00000488171 GJC2Q5T442 439 aaPredicted RBP22.91■■□□□ 1.26
CD55-209ENST00000488171 RILPL2Q969X0 211 aa22.91■■□□□ 1.26
CD55-209ENST00000488171 OSBPL3Q9H4L5 887 aa22.91■■□□□ 1.26
CD55-209ENST00000488171 DNAJC25-GNG10A0A024R161 153 aa22.9■■□□□ 1.26
CD55-209ENST00000488171 ORC4O43929 436 aa22.9■■□□□ 1.26
CD55-209ENST00000488171 HSPD1P10809 573 aaKnown RBP22.9■■□□□ 1.26
CD55-209ENST00000488171 BMP8BP34820 402 aa22.9■■□□□ 1.26
CD55-209ENST00000488171 NOVP48745 357 aa22.9■■□□□ 1.26
CD55-209ENST00000488171 PPP4R3BQ5MIZ7 849 aa22.9■■□□□ 1.26
CD55-209ENST00000488171 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.9■■□□□ 1.26
CD55-209ENST00000488171 ARRDC4Q8NCT1 418 aa22.9■■□□□ 1.26
CD55-209ENST00000488171 STX8Q9UNK0 236 aa22.9■■□□□ 1.26
CD55-209ENST00000488171 CTDP1Q9Y5B0 961 aaPredicted RBP22.9■■□□□ 1.26
CD55-209ENST00000488171 ZMYM6O95789 1325 aa22.9■■□□□ 1.26
CD55-209ENST00000488171 TMEM232C9JQI7 657 aa22.89■■□□□ 1.26
CD55-209ENST00000488171 RANBP6O60518 1105 aaKnown RBP22.89■■□□□ 1.26
CD55-209ENST00000488171 TAL1P17542 331 aaPredicted RBP22.89■■□□□ 1.26
CD55-209ENST00000488171 MCCP23508 829 aa22.89■■□□□ 1.26
CD55-209ENST00000488171 MAGEA10P43363 369 aaPredicted RBP22.89■■□□□ 1.26
CD55-209ENST00000488171 SLC4A3P48751 1232 aa22.89■■□□□ 1.26
CD55-209ENST00000488171 OAZ1P54368 228 aa22.89■■□□□ 1.26
CD55-209ENST00000488171 DNAH12Q6ZR08 3092 aa22.89■■□□□ 1.25
CD55-209ENST00000488171 CCDC171Q6TFL3 1326 aa22.89■■□□□ 1.25
CD55-209ENST00000488171 ZNF865P0CJ78 1059 aaPredicted RBP22.89■■□□□ 1.25
CD55-209ENST00000488171 SLC1A4P43007 532 aa22.89■■□□□ 1.25
CD55-209ENST00000488171 STAT2P52630 851 aa22.89■■□□□ 1.25
CD55-209ENST00000488171 RASGRP2Q7LDG7 609 aa22.89■■□□□ 1.25
CD55-209ENST00000488171 CHMP4CQ96CF2 233 aa22.89■■□□□ 1.25
CD55-209ENST00000488171 SDSP20132 328 aa22.88■■□□□ 1.25
CD55-209ENST00000488171 ATN1P54259 1190 aaPredicted RBP22.88■■□□□ 1.25
CD55-209ENST00000488171 LRRC41Q15345 812 aa22.88■■□□□ 1.25
CD55-209ENST00000488171 FAM160B2Q86V87 743 aa22.88■■□□□ 1.25
CD55-209ENST00000488171 STAG1Q8WVM7 1258 aa22.88■■□□□ 1.25
CD55-209ENST00000488171 DDX11Q96FC9 970 aa22.88■■□□□ 1.25
CD55-209ENST00000488171 ISY1Q9ULR0 285 aaKnown RBP22.88■■□□□ 1.25
CD55-209ENST00000488171 ZNF536O15090 1300 aa22.87■■□□□ 1.25
CD55-209ENST00000488171 SMCHD1A6NHR9 2005 aa22.87■■□□□ 1.25
CD55-209ENST00000488171 KBTBD13C9JR72 458 aa22.87■■□□□ 1.25
CD55-209ENST00000488171 PLA2G6O60733 806 aa22.87■■□□□ 1.25
CD55-209ENST00000488171 FDX1P10109 184 aa22.87■■□□□ 1.25
CD55-209ENST00000488171 MAMDC4Q6UXC1 1216 aa22.87■■□□□ 1.25
CD55-209ENST00000488171 KCTD1Q719H9 257 aa22.87■■□□□ 1.25
CD55-209ENST00000488171 MSL3Q8N5Y2 521 aaKnown RBP22.87■■□□□ 1.25
CD55-209ENST00000488171 CHST13Q8NET6 341 aa22.87■■□□□ 1.25
CD55-209ENST00000488171 CHURC1Q8WUH1 139 aa22.87■■□□□ 1.25
CD55-209ENST00000488171 SYNGAP1Q96PV0 1343 aa22.86■■□□□ 1.25
CD55-209ENST00000488171 SZT2Q5T011 3432 aa22.86■■□□□ 1.25
CD55-209ENST00000488171 SOX1O00570 391 aaPredicted RBP22.86■■□□□ 1.25
CD55-209ENST00000488171 HAND2P61296 217 aa22.86■■□□□ 1.25
CD55-209ENST00000488171 RCSD1Q6JBY9 416 aa22.86■■□□□ 1.25
CD55-209ENST00000488171 FGD4Q96M96 766 aa22.86■■□□□ 1.25
CD55-209ENST00000488171 TOMM22Q9NS69 142 aa22.86■■□□□ 1.25
CD55-209ENST00000488171 FBXO40Q9UH90 709 aa22.86■■□□□ 1.25
CD55-209ENST00000488171 SUPT16HQ9Y5B9 1047 aaKnown RBP22.86■■□□□ 1.25
CD55-209ENST00000488171 SNAI1O95863 264 aaPredicted RBP22.85■■□□□ 1.25
CD55-209ENST00000488171 MYCNP04198 464 aaPredicted RBP22.85■■□□□ 1.25
CD55-209ENST00000488171 RARBP10826 455 aa22.85■■□□□ 1.25
CD55-209ENST00000488171 RTP1P59025 263 aa22.85■■□□□ 1.25
CD55-209ENST00000488171 IKQ13123 557 aaPredicted RBP22.85■■□□□ 1.25
CD55-209ENST00000488171 RRP12Q5JTH9 1297 aaKnown RBP22.85■■□□□ 1.25
CD55-209ENST00000488171 ZNF467Q7Z7K2 595 aaPredicted RBP22.85■■□□□ 1.25
CD55-209ENST00000488171 ANKRD35Q8N283 1001 aa22.85■■□□□ 1.25
CD55-209ENST00000488171 XPNPEP3Q9NQH7 507 aa22.85■■□□□ 1.25
CD55-209ENST00000488171 HOMER2Q9NSB8 354 aa22.85■■□□□ 1.25
CD55-209ENST00000488171 CNPY2Q9Y2B0 182 aa22.85■■□□□ 1.25
CD55-209ENST00000488171 AKR1A1P14550 325 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms