RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 ATP2A1O14983 1001 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 NMT2O60551 498 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 MSCO60682 206 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 COPB2P35606 906 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 STAT3P40763 770 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 NOVP48745 357 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 TFAP4Q01664 338 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 NUCB1Q02818 461 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 NMIQ13287 307 aaPredicted RBP13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 ALX1Q15699 326 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 ZNF792Q3KQV3 632 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SNRNP48Q6IEG0 339 aaKnown RBP13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 OSBPL3Q9H4L5 887 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SLC38A10Q9HBR0 1119 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 IL17RBQ9NRM6 502 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 CDH23Q9H251 3354 aa13.33□□□□□ -0.28
RAB11FIP3-210ENST00000487899 DNAJC25-GNG10A0A024R161 153 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 DNM1LO00429 736 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SEPT4O43236 478 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 ORC4O43929 436 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SLC3A2P08195 630 aaKnown RBP13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 FGRP09769 529 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 CNGA1P29973 690 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 ANO1Q5XXA6 986 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 B4GALNT3Q6L9W6 998 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 CHD1LQ86WJ1 897 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 TICAM2Q86XR7 235 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 PLEKHM2Q8IWE5 1019 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 PRPF38AQ8NAV1 312 aaKnown RBP13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 GMCL1Q96IK5 515 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 FGD4Q96M96 766 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 GDF15Q99988 308 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 ZMYND8Q9ULU4 1186 aaPredicted RBP13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 CCDC171Q6TFL3 1326 aa13.32□□□□□ -0.28
RAB11FIP3-210ENST00000487899 A0A1W2PPC1 479 aa13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 HSPD1P10809 573 aaKnown RBP13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SYN1P17600 705 aa13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 KCTD2Q14681 263 aa13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 MCMDC2Q4G0Z9 681 aa13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 PRAMEF19Q5SWL8 479 aa13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SLFN13Q68D06 897 aa13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 KIFC2Q96AC6 838 aa13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 RWDD1Q9H446 243 aaPredicted RBP13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SLC5A4Q9NY91 659 aa13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 FEM1BQ9UK73 627 aa13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 DIS3Q9Y2L1 958 aaKnown RBP13.31□□□□□ -0.28
RAB11FIP3-210ENST00000487899 TSPY2A6NKD2 308 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 FGAP02671 866 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 BMP3P12645 472 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 TAL1P17542 331 aaPredicted RBP13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 STAT2P52630 851 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 OAZ1P54368 228 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 TBC1D10CQ8IV04 446 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 LENG1Q96BZ8 264 aaPredicted RBP13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 TINF2Q9BSI4 451 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 RAVER2Q9HCJ3 691 aaKnown RBP13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 NRBP1Q9UHY1 535 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 STX8Q9UNK0 236 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 ZNF536O15090 1300 aa13.3□□□□□ -0.28
RAB11FIP3-210ENST00000487899 KIAA1217Q5T5P2 1943 aa13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SOX1O00570 391 aaPredicted RBP13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 ZNF865P0CJ78 1059 aaPredicted RBP13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 MAGEA10P43363 369 aaPredicted RBP13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SNX17Q15036 470 aa13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 GJC2Q5T442 439 aaPredicted RBP13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 CPXCR1Q8N123 301 aa13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 NEDD4P46934 1319 aa13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SYNGAP1Q96PV0 1343 aa13.29□□□□□ -0.28
RAB11FIP3-210ENST00000487899 TMEM232C9JQI7 657 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 RANBP6O60518 1105 aaKnown RBP13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SDSP20132 328 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SLC1A4P43007 532 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 HAND2P61296 217 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 LRRC41Q15345 812 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 KCTD1Q719H9 257 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 RILPL2Q969X0 211 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 CHMP4CQ96CF2 233 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 SENP6Q9GZR1 1112 aaPredicted RBP13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 IL25Q9H293 177 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 UNC80Q8N2C7 3258 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 ASTN1O14525 1302 aa13.28□□□□□ -0.28
RAB11FIP3-210ENST00000487899 ADCY6O43306 1168 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PLA2G6O60733 806 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ZBED4O75132 1171 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ADAMTS4O75173 837 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MCCP23508 829 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PDE4AP27815 886 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 BMP8BP34820 402 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 PPP4R3BQ5MIZ7 849 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 RCSD1Q6JBY9 416 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MAMDC4Q6UXC1 1216 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 ZNF467Q7Z7K2 595 aaPredicted RBP13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 FAM160B2Q86V87 743 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 MSL3Q8N5Y2 521 aaKnown RBP13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 STAG1Q8WVM7 1258 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 A1CFQ9NQ94 594 aaKnown RBP13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 HOMER2Q9NSB8 354 aa13.27□□□□□ -0.29
RAB11FIP3-210ENST00000487899 SUPT16HQ9Y5B9 1047 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms